RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 MRPL50Q8N5N7 158 aaKnown RBP11.67□□□□□ -0.54
LINC01238-201ENST00000416204 ANKLE1Q8NAG6 615 aa11.67□□□□□ -0.54
LINC01238-201ENST00000416204 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
LINC01238-201ENST00000416204 PA2G4Q9UQ80 394 aaKnown RBP11.67□□□□□ -0.54
LINC01238-201ENST00000416204 DOCK1Q14185 1865 aa11.67□□□□□ -0.54
LINC01238-201ENST00000416204 PTPRFP10586 1907 aa11.66□□□□□ -0.54
LINC01238-201ENST00000416204 GAKO14976 1311 aa11.66□□□□□ -0.54
LINC01238-201ENST00000416204 PHIPQ8WWQ0 1821 aa11.66□□□□□ -0.54
LINC01238-201ENST00000416204 CCND3P30281 292 aaPredicted RBP11.66□□□□□ -0.54
LINC01238-201ENST00000416204 RASGRF1Q13972 1273 aa11.66□□□□□ -0.54
LINC01238-201ENST00000416204 CCL14Q16627 93 aa11.66□□□□□ -0.54
LINC01238-201ENST00000416204 SHROOM1Q2M3G4 852 aaPredicted RBP11.66□□□□□ -0.54
LINC01238-201ENST00000416204 CEP126Q9P2H0 1117 aa11.66□□□□□ -0.54
LINC01238-201ENST00000416204 OGDHLQ9ULD0 1010 aa11.66□□□□□ -0.54
LINC01238-201ENST00000416204 DENND2AQ9ULE3 1009 aa11.66□□□□□ -0.54
LINC01238-201ENST00000416204 MAP3K10Q02779 954 aa11.65□□□□□ -0.54
LINC01238-201ENST00000416204 MTMR2Q13614 643 aa11.65□□□□□ -0.54
LINC01238-201ENST00000416204 CCDC102BQ68D86 513 aa11.65□□□□□ -0.54
LINC01238-201ENST00000416204 ZNF280CQ8ND82 737 aa11.65□□□□□ -0.54
LINC01238-201ENST00000416204 TXNRD2Q9NNW7 524 aa11.65□□□□□ -0.54
LINC01238-201ENST00000416204 NDUFB9Q9Y6M9 179 aa11.65□□□□□ -0.54
LINC01238-201ENST00000416204 CDH23Q9H251 3354 aa11.65□□□□□ -0.54
LINC01238-201ENST00000416204 MROH7-TTC4A0A0A0MT08 1334 aa11.64□□□□□ -0.55
LINC01238-201ENST00000416204 SALL1Q9NSC2 1324 aa11.64□□□□□ -0.55
LINC01238-201ENST00000416204 ZKSCAN1P17029 563 aaPredicted RBP11.64□□□□□ -0.55
LINC01238-201ENST00000416204 GCLCP48506 637 aaPredicted RBP11.64□□□□□ -0.55
LINC01238-201ENST00000416204 ATN1P54259 1190 aaPredicted RBP11.64□□□□□ -0.55
LINC01238-201ENST00000416204 TIMM10P62072 90 aa11.64□□□□□ -0.55
LINC01238-201ENST00000416204 IRX3P78415 501 aaPredicted RBP11.64□□□□□ -0.55
LINC01238-201ENST00000416204 JAG1P78504 1218 aa11.64□□□□□ -0.55
LINC01238-201ENST00000416204 MECOMQ03112 1051 aa11.64□□□□□ -0.55
LINC01238-201ENST00000416204 CACNB2Q08289 660 aaPredicted RBP11.64□□□□□ -0.55
LINC01238-201ENST00000416204 PI16Q6UXB8 463 aa11.64□□□□□ -0.55
LINC01238-201ENST00000416204 PROCA1Q8NCQ7 364 aaPredicted RBP11.64□□□□□ -0.55
LINC01238-201ENST00000416204 ZNF384Q8TF68 577 aa11.64□□□□□ -0.55
LINC01238-201ENST00000416204 P2RX7Q99572 595 aaKnown RBP11.64□□□□□ -0.55
LINC01238-201ENST00000416204 MYH2Q9UKX2 1941 aa11.64□□□□□ -0.55
LINC01238-201ENST00000416204 RHBDL3P58872 404 aa11.63□□□□□ -0.55
LINC01238-201ENST00000416204 NCBP3Q53F19 620 aaKnown RBP11.63□□□□□ -0.55
LINC01238-201ENST00000416204 MAP3K21Q5TCX8 1036 aa11.63□□□□□ -0.55
LINC01238-201ENST00000416204 TBC1D9Q6ZT07 1266 aa11.63□□□□□ -0.55
LINC01238-201ENST00000416204 SSH1Q8WYL5 1049 aa11.63□□□□□ -0.55
LINC01238-201ENST00000416204 PAGR1Q9BTK6 254 aa11.63□□□□□ -0.55
LINC01238-201ENST00000416204 PLXNB2O15031 1838 aa11.63□□□□□ -0.55
LINC01238-201ENST00000416204 USP17L5A8MUK1 530 aa11.62□□□□□ -0.55
LINC01238-201ENST00000416204 SEMA3EO15041 775 aa11.62□□□□□ -0.55
LINC01238-201ENST00000416204 COL6A1P12109 1028 aa11.62□□□□□ -0.55
LINC01238-201ENST00000416204 CAPN2P17655 700 aa11.62□□□□□ -0.55
LINC01238-201ENST00000416204 PABPC4Q13310 644 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC01238-201ENST00000416204 Q3C1V9 767 aa11.62□□□□□ -0.55
LINC01238-201ENST00000416204 LHX8Q68G74 356 aa11.62□□□□□ -0.55
LINC01238-201ENST00000416204 FAM9BQ8IZU0 186 aa11.62□□□□□ -0.55
LINC01238-201ENST00000416204 ZGPATQ8N5A5 531 aaKnown RBP11.62□□□□□ -0.55
LINC01238-201ENST00000416204 NUDT12Q9BQG2 462 aa11.62□□□□□ -0.55
LINC01238-201ENST00000416204 SENP6Q9GZR1 1112 aaPredicted RBP11.62□□□□□ -0.55
LINC01238-201ENST00000416204 PORCNQ9H237 461 aa11.62□□□□□ -0.55
LINC01238-201ENST00000416204 LOC285556D6RIA3 1793 aa11.62□□□□□ -0.55
LINC01238-201ENST00000416204 GPR75-ASB3A0A0A6YYF3 556 aa11.61□□□□□ -0.55
LINC01238-201ENST00000416204 POTEB2H3BUK9 544 aa11.61□□□□□ -0.55
LINC01238-201ENST00000416204 CIAO1O76071 339 aa11.61□□□□□ -0.55
LINC01238-201ENST00000416204 GDF11O95390 407 aa11.61□□□□□ -0.55
LINC01238-201ENST00000416204 CAP2P40123 477 aa11.61□□□□□ -0.55
LINC01238-201ENST00000416204 HERVK_113P62684 666 aa11.61□□□□□ -0.55
LINC01238-201ENST00000416204 PDE3AQ14432 1141 aa11.61□□□□□ -0.55
LINC01238-201ENST00000416204 ERICH6Q7L0X2 663 aa11.61□□□□□ -0.55
LINC01238-201ENST00000416204 CCAR1Q8IX12 1150 aaKnown RBP11.61□□□□□ -0.55
LINC01238-201ENST00000416204 GPRC5AQ8NFJ5 357 aa11.61□□□□□ -0.55
LINC01238-201ENST00000416204 SH3RF3Q8TEJ3 882 aaPredicted RBP11.61□□□□□ -0.55
LINC01238-201ENST00000416204 LBHD1Q9BQE6 289 aaPredicted RBP11.61□□□□□ -0.55
LINC01238-201ENST00000416204 OSBPL5Q9H0X9 879 aaPredicted RBP11.61□□□□□ -0.55
LINC01238-201ENST00000416204 MORF4L1Q9UBU8 362 aa11.61□□□□□ -0.55
LINC01238-201ENST00000416204 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.61□□□□□ -0.55
LINC01238-201ENST00000416204 TBC1D12O60347 775 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 UBTFL1P0CB47 393 aaPredicted RBP11.6□□□□□ -0.55
LINC01238-201ENST00000416204 CNGA1P29973 690 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 TFCP2Q12800 502 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 ZYXQ15942 572 aaKnown RBP11.6□□□□□ -0.55
LINC01238-201ENST00000416204 ZNF697Q5TEC3 545 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 WDR78Q5VTH9 848 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 POTEEQ6S8J3 1075 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 SLF2Q8IX21 1173 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 TEX11Q8IYF3 940 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 FAM163AQ96GL9 167 aaPredicted RBP11.6□□□□□ -0.55
LINC01238-201ENST00000416204 XAGE2Q96GT9 111 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 CDX2Q99626 313 aaPredicted RBP11.6□□□□□ -0.55
LINC01238-201ENST00000416204 CWC22Q9HCG8 908 aaKnown RBP11.6□□□□□ -0.55
LINC01238-201ENST00000416204 TMOD4Q9NZQ9 345 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 FLRT1Q9NZU1 646 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 RAI14Q9P0K7 980 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 RBPJLQ9UBG7 517 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 PTPRCP08575 1304 aa11.6□□□□□ -0.55
LINC01238-201ENST00000416204 MYCNP04198 464 aaPredicted RBP11.59□□□□□ -0.55
LINC01238-201ENST00000416204 IL15P40933 162 aaPredicted RBP11.59□□□□□ -0.55
LINC01238-201ENST00000416204 ERVK-9P63128 1117 aa11.59□□□□□ -0.55
LINC01238-201ENST00000416204 ERVK-24P63145 666 aa11.59□□□□□ -0.55
LINC01238-201ENST00000416204 SH3D19Q5HYK7 790 aa11.59□□□□□ -0.55
LINC01238-201ENST00000416204 C9orf50Q5SZB4 431 aa11.59□□□□□ -0.55
LINC01238-201ENST00000416204 ANO1Q5XXA6 986 aa11.59□□□□□ -0.55
LINC01238-201ENST00000416204 SPTY2D1Q68D10 685 aaPredicted RBP11.59□□□□□ -0.55
LINC01238-201ENST00000416204 GPR142Q7Z601 462 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms