RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 RHOXF2Q9BQY4 288 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 IQCGQ9H095 443 aaKnown RBP11.92□□□□□ -0.5
COL12A1-203ENST00000416123 TMEM2Q9UHN6 1383 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 ERVV-2B6SEH9 535 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 KRT86O43790 486 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 KRT83P78385 493 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 ATP6V0A2Q9Y487 856 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 TTC38Q5R3I4 469 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 C2CD5Q86YS7 1000 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 PPP1R7Q15435 360 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 GADL1Q6ZQY3 521 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 MYCT1Q8N699 235 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 SMCR8Q8TEV9 937 aaPredicted RBP11.91□□□□□ -0.5
COL12A1-203ENST00000416123 RNF34Q969K3 372 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 SELENOSQ9BQE4 189 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 SAMD9LQ8IVG5 1584 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 E7EWF7 191 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 ADCY7P51828 1080 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 IL17REQ8NFR9 667 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 TTC37Q6PGP7 1564 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 LRRC47Q8N1G4 583 aaKnown RBP11.91□□□□□ -0.5
COL12A1-203ENST00000416123 TCIRG1Q13488 830 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 SUPT20HQ8NEM7 779 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 MRPL44Q9H9J2 332 aaKnown RBP11.91□□□□□ -0.5
COL12A1-203ENST00000416123 ASAP1Q9ULH1 1129 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 RPS8P62241 208 aaKnown RBP11.91□□□□□ -0.5
COL12A1-203ENST00000416123 LRRC24Q50LG9 513 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 DNAJC21Q5F1R6 531 aaKnown RBP11.91□□□□□ -0.5
COL12A1-203ENST00000416123 CDC37L1Q7L3B6 337 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 KCNH3Q9ULD8 1083 aa11.91□□□□□ -0.5
COL12A1-203ENST00000416123 RPL13P26373 211 aaKnown RBP11.9□□□□□ -0.5
COL12A1-203ENST00000416123 LMBR1Q8WVP7 490 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 SEC62Q99442 399 aaKnown RBP11.9□□□□□ -0.5
COL12A1-203ENST00000416123 BLZF1Q9H2G9 400 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 LUC7L2Q9Y383 392 aaKnown RBP11.9□□□□□ -0.5
COL12A1-203ENST00000416123 MAGI3Q5TCQ9 1506 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 PTPRTO14522 1441 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 PLCD1P51178 756 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 IRX3P78415 501 aaPredicted RBP11.9□□□□□ -0.5
COL12A1-203ENST00000416123 TRPC3Q13507 836 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 PRPHP41219 470 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 BAG6P46379 1132 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 CNNM4Q6P4Q7 775 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 APBB1IPQ7Z5R6 666 aaPredicted RBP11.9□□□□□ -0.5
COL12A1-203ENST00000416123 METTL13Q8N6R0 699 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 TEKT1Q969V4 418 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 RRP9O43818 475 aaKnown RBP11.9□□□□□ -0.5
COL12A1-203ENST00000416123 CALUO43852 315 aaPredicted RBP11.9□□□□□ -0.5
COL12A1-203ENST00000416123 GIGYF1O75420 1035 aaPredicted RBP11.9□□□□□ -0.5
COL12A1-203ENST00000416123 SYT10Q6XYQ8 523 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 TPH2Q8IWU9 490 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 SNX29Q8TEQ0 813 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 PPARDQ03181 441 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 MICALCLQ6ZW33 695 aa11.9□□□□□ -0.5
COL12A1-203ENST00000416123 IBTKQ9P2D0 1353 aaPredicted RBP11.9□□□□□ -0.51
COL12A1-203ENST00000416123 KRT19P08727 400 aa11.9□□□□□ -0.51
COL12A1-203ENST00000416123 MXRA7P84157 204 aa11.9□□□□□ -0.51
COL12A1-203ENST00000416123 INTS4Q96HW7 963 aaKnown RBP11.89□□□□□ -0.51
COL12A1-203ENST00000416123 ARID4AP29374 1257 aaPredicted RBP11.89□□□□□ -0.51
COL12A1-203ENST00000416123 PPARAQ07869 468 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 DIS3L2Q8IYB7 885 aaKnown RBP11.89□□□□□ -0.51
COL12A1-203ENST00000416123 RDH13Q8NBN7 331 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 MRRFQ96E11 262 aaKnown RBP11.89□□□□□ -0.51
COL12A1-203ENST00000416123 SYNRGQ9UMZ2 1314 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 XRCC6P12956 609 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL12A1-203ENST00000416123 RASA3Q14644 834 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 UAP1Q16222 522 aaPredicted RBP11.89□□□□□ -0.51
COL12A1-203ENST00000416123 LONRF3Q496Y0 759 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 SPOUT1Q5T280 376 aaKnown RBP11.89□□□□□ -0.51
COL12A1-203ENST00000416123 NELFCDQ8IXH7 590 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 ZBTB38Q8NAP3 1195 aaPredicted RBP11.89□□□□□ -0.51
COL12A1-203ENST00000416123 BABAM1Q9NWV8 329 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 EFCAB6Q5THR3 1501 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 USP17L12C9JPN9 530 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 USP17L21D6R901 530 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 SGSM2O43147 1006 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 KIF4AO95239 1232 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 HAUS3Q68CZ6 603 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 AKR1B15C9JRZ8 316 aaPredicted RBP11.89□□□□□ -0.51
COL12A1-203ENST00000416123 ARFGAP3Q9NP61 516 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 RILPL1Q5EBL4 403 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 ARHGEF16Q5VV41 709 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 TESPA1A2RU30 521 aaPredicted RBP11.89□□□□□ -0.51
COL12A1-203ENST00000416123 TBC1D8BQ0IIM8 1120 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 BEND3Q5T5X7 828 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 USPL1Q5W0Q7 1092 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 MSANTD4Q8NCY6 345 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 ZNF526Q8TF50 670 aaPredicted RBP11.89□□□□□ -0.51
COL12A1-203ENST00000416123 SREK1Q8WXA9 508 aaKnown RBP11.89□□□□□ -0.51
COL12A1-203ENST00000416123 KIAA0232Q92628 1395 aa11.89□□□□□ -0.51
COL12A1-203ENST00000416123 CRKLP46109 303 aaKnown RBP11.88□□□□□ -0.51
COL12A1-203ENST00000416123 GREM2Q9H772 168 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 KIFAP3Q92845 792 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 STX10O60499 249 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 ADGRL2O95490 1459 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 HOXB7P09629 217 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 GOLGA8HP0CJ92 632 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 CCDC122Q5T0U0 273 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 DNM3Q9UQ16 869 aa11.88□□□□□ -0.51
COL12A1-203ENST00000416123 KDRP35968 1356 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms