RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 CTNND1O60716 968 aaKnown RBP16.86■□□□□ 0.29
GYPC-203ENST00000409836 AOC2O75106 756 aa16.86■□□□□ 0.29
GYPC-203ENST00000409836 INPP5BP32019 993 aa16.86■□□□□ 0.29
GYPC-203ENST00000409836 GJA5P36382 358 aa16.86■□□□□ 0.29
GYPC-203ENST00000409836 GABPAQ06546 454 aa16.86■□□□□ 0.29
GYPC-203ENST00000409836 PAXIP1Q6ZW49 1069 aaPredicted RBP16.86■□□□□ 0.29
GYPC-203ENST00000409836 MIGA2Q7L4E1 593 aa16.86■□□□□ 0.29
GYPC-203ENST00000409836 ERO1BQ86YB8 467 aa16.86■□□□□ 0.29
GYPC-203ENST00000409836 FOXP4Q8IVH2 680 aaPredicted RBP16.86■□□□□ 0.29
GYPC-203ENST00000409836 AIDAQ96BJ3 306 aa16.86■□□□□ 0.29
GYPC-203ENST00000409836 STRBPQ96SI9 672 aaKnown RBP16.86■□□□□ 0.29
GYPC-203ENST00000409836 ZIC5Q96T25 663 aa16.86■□□□□ 0.29
GYPC-203ENST00000409836 ARMT1Q9H993 441 aa16.86■□□□□ 0.29
GYPC-203ENST00000409836 SAGE1Q9NXZ1 904 aa16.86■□□□□ 0.29
GYPC-203ENST00000409836 TESPA1A2RU30 521 aaPredicted RBP16.85■□□□□ 0.29
GYPC-203ENST00000409836 USP5P45974 858 aa16.85■□□□□ 0.29
GYPC-203ENST00000409836 PPIL2Q13356 520 aa16.85■□□□□ 0.29
GYPC-203ENST00000409836 SCYL3Q8IZE3 742 aa16.85■□□□□ 0.29
GYPC-203ENST00000409836 SLC10A4Q96EP9 437 aa16.85■□□□□ 0.29
GYPC-203ENST00000409836 CFHR5Q9BXR6 569 aa16.85■□□□□ 0.29
GYPC-203ENST00000409836 GINM1Q9NU53 330 aa16.85■□□□□ 0.29
GYPC-203ENST00000409836 PALD1Q9ULE6 856 aa16.85■□□□□ 0.29
GYPC-203ENST00000409836 MANSC4A6NHS7 340 aaPredicted RBP16.84■□□□□ 0.29
GYPC-203ENST00000409836 GPAA1O43292 621 aa16.84■□□□□ 0.29
GYPC-203ENST00000409836 HLA-DOAP06340 250 aa16.84■□□□□ 0.29
GYPC-203ENST00000409836 NEFLP07196 543 aa16.84■□□□□ 0.29
GYPC-203ENST00000409836 GNAT2P19087 354 aa16.84■□□□□ 0.29
GYPC-203ENST00000409836 TM4SF4P48230 202 aa16.84■□□□□ 0.29
GYPC-203ENST00000409836 KIF23Q02241 960 aaPredicted RBP16.84■□□□□ 0.29
GYPC-203ENST00000409836 PPATQ06203 517 aa16.84■□□□□ 0.29
GYPC-203ENST00000409836 TTC6Q86TZ1 520 aa16.84■□□□□ 0.29
GYPC-203ENST00000409836 SDR42E1Q8WUS8 393 aa16.84■□□□□ 0.29
GYPC-203ENST00000409836 OPTNQ96CV9 577 aa16.84■□□□□ 0.29
GYPC-203ENST00000409836 MS4A4AQ96JQ5 239 aa16.84■□□□□ 0.29
GYPC-203ENST00000409836 KCNH4Q9UQ05 1017 aa16.84■□□□□ 0.29
GYPC-203ENST00000409836 ZMYM6O95789 1325 aa16.83■□□□□ 0.28
GYPC-203ENST00000409836 GSPT1P15170 499 aaKnown RBP16.83■□□□□ 0.28
GYPC-203ENST00000409836 INHBEP58166 350 aa16.83■□□□□ 0.28
GYPC-203ENST00000409836 SREBF2Q12772 1141 aa16.83■□□□□ 0.28
GYPC-203ENST00000409836 TTC22Q5TAA0 569 aa16.83■□□□□ 0.28
GYPC-203ENST00000409836 TATDN1Q6P1N9 297 aa16.83■□□□□ 0.28
GYPC-203ENST00000409836 ZKSCAN4Q969J2 545 aaPredicted RBP16.83■□□□□ 0.28
GYPC-203ENST00000409836 TBC1D2Q9BYX2 928 aa16.83■□□□□ 0.28
GYPC-203ENST00000409836 ELP3Q9H9T3 547 aa16.83■□□□□ 0.28
GYPC-203ENST00000409836 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.83■□□□□ 0.28
GYPC-203ENST00000409836 SERPINB13Q9UIV8 391 aa16.83■□□□□ 0.28
GYPC-203ENST00000409836 GSG1L2A8MUP6 293 aa16.82■□□□□ 0.28
GYPC-203ENST00000409836 M0R2C6 588 aa16.82■□□□□ 0.28
GYPC-203ENST00000409836 FOXP2O15409 715 aa16.82■□□□□ 0.28
GYPC-203ENST00000409836 PRKAB2O43741 272 aa16.82■□□□□ 0.28
GYPC-203ENST00000409836 HSPA1AP0DMV8 641 aaKnown RBP16.82■□□□□ 0.28
GYPC-203ENST00000409836 HSPA1BP0DMV9 641 aaKnown RBP16.82■□□□□ 0.28
GYPC-203ENST00000409836 CAP2P40123 477 aa16.82■□□□□ 0.28
GYPC-203ENST00000409836 SBK1Q52WX2 424 aa16.82■□□□□ 0.28
GYPC-203ENST00000409836 EPB41L4AQ9HCS5 686 aaPredicted RBP16.82■□□□□ 0.28
GYPC-203ENST00000409836 ZCCHC17Q9NP64 241 aaKnown RBP16.82■□□□□ 0.28
GYPC-203ENST00000409836 HELLSQ9NRZ9 838 aa16.82■□□□□ 0.28
GYPC-203ENST00000409836 ARPP21Q9UBL0 812 aaPredicted RBP16.82■□□□□ 0.28
GYPC-203ENST00000409836 SLURP2P0DP57 97 aa16.81■□□□□ 0.28
GYPC-203ENST00000409836 PTPRAP18433 802 aa16.81■□□□□ 0.28
GYPC-203ENST00000409836 C12orf60Q5U649 245 aa16.81■□□□□ 0.28
GYPC-203ENST00000409836 CNKSR2Q8WXI2 1034 aa16.81■□□□□ 0.28
GYPC-203ENST00000409836 MCM9Q9NXL9 1143 aa16.81■□□□□ 0.28
GYPC-203ENST00000409836 SAP30BPQ9UHR5 308 aaKnown RBP16.81■□□□□ 0.28
GYPC-203ENST00000409836 SLC4A4Q9Y6R1 1079 aa16.81■□□□□ 0.28
GYPC-203ENST00000409836 FAM196BA6NMK8 535 aa16.8■□□□□ 0.28
GYPC-203ENST00000409836 IRF6O14896 467 aa16.8■□□□□ 0.28
GYPC-203ENST00000409836 PLCD1P51178 756 aa16.8■□□□□ 0.28
GYPC-203ENST00000409836 GTF2A2P52657 109 aa16.8■□□□□ 0.28
GYPC-203ENST00000409836 GRM1Q13255 1194 aa16.8■□□□□ 0.28
GYPC-203ENST00000409836 RRP1BQ14684 758 aaKnown RBP16.8■□□□□ 0.28
GYPC-203ENST00000409836 NOM1Q5C9Z4 860 aaKnown RBP16.8■□□□□ 0.28
GYPC-203ENST00000409836 OTUD5Q96G74 571 aa16.8■□□□□ 0.28
GYPC-203ENST00000409836 SWAP70Q9UH65 585 aa16.8■□□□□ 0.28
GYPC-203ENST00000409836 A0A0D9SFI3 127 aa16.79■□□□□ 0.28
GYPC-203ENST00000409836 HIP1O00291 1037 aa16.79■□□□□ 0.28
GYPC-203ENST00000409836 ASNSP08243 561 aa16.79■□□□□ 0.28
GYPC-203ENST00000409836 SHMT1P34896 483 aa16.79■□□□□ 0.28
GYPC-203ENST00000409836 CRACR2BQ8N4Y2 399 aaPredicted RBP16.79■□□□□ 0.28
GYPC-203ENST00000409836 DDRGK1Q96HY6 314 aa16.79■□□□□ 0.28
GYPC-203ENST00000409836 SEC62Q99442 399 aaKnown RBP16.79■□□□□ 0.28
GYPC-203ENST00000409836 PICK1Q9NRD5 415 aa16.79■□□□□ 0.28
GYPC-203ENST00000409836 CXCL11O14625 94 aa16.78■□□□□ 0.28
GYPC-203ENST00000409836 FOXN1O15353 648 aa16.78■□□□□ 0.28
GYPC-203ENST00000409836 SDSP20132 328 aa16.78■□□□□ 0.28
GYPC-203ENST00000409836 SNAPC2Q13487 334 aa16.78■□□□□ 0.28
GYPC-203ENST00000409836 MOGSQ13724 837 aa16.78■□□□□ 0.28
GYPC-203ENST00000409836 CTR9Q6PD62 1173 aa16.78■□□□□ 0.28
GYPC-203ENST00000409836 C16orf86Q6ZW13 317 aa16.78■□□□□ 0.28
GYPC-203ENST00000409836 BRI3BPQ8WY22 251 aa16.78■□□□□ 0.28
GYPC-203ENST00000409836 CCDC136Q96JN2 1154 aa16.78■□□□□ 0.28
GYPC-203ENST00000409836 ZBTB21Q9ULJ3 1066 aa16.78■□□□□ 0.28
GYPC-203ENST00000409836 AFG3L2Q9Y4W6 797 aa16.78■□□□□ 0.28
GYPC-203ENST00000409836 RAD50Q92878 1312 aa16.77■□□□□ 0.28
GYPC-203ENST00000409836 A0A0G2JLL6 359 aaPredicted RBP16.77■□□□□ 0.28
GYPC-203ENST00000409836 TRIM6-TRIM34B2RNG4 842 aa16.77■□□□□ 0.28
GYPC-203ENST00000409836 USP17L12C9JPN9 530 aa16.77■□□□□ 0.28
GYPC-203ENST00000409836 USP17L21D6R901 530 aa16.77■□□□□ 0.28
GYPC-203ENST00000409836 IGF2BP3O00425 579 aaKnown RBP eCLIP16.77■□□□□ 0.28
GYPC-203ENST00000409836 ALDH1A1P00352 501 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms