RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 WBP1LQ9NX94 342 aa23.87■■□□□ 1.41
PDLIM2-207ENST00000409417 CTNND1O60716 968 aaKnown RBP23.86■■□□□ 1.41
PDLIM2-207ENST00000409417 NOL9Q5SY16 702 aaKnown RBP23.86■■□□□ 1.41
PDLIM2-207ENST00000409417 ERICH6BQ5W0A0 696 aa23.86■■□□□ 1.41
PDLIM2-207ENST00000409417 TTC6Q86TZ1 520 aa23.86■■□□□ 1.41
PDLIM2-207ENST00000409417 ERO1BQ86YB8 467 aa23.86■■□□□ 1.41
PDLIM2-207ENST00000409417 REM2Q8IYK8 340 aaPredicted RBP23.86■■□□□ 1.41
PDLIM2-207ENST00000409417 RILPL2Q969X0 211 aa23.86■■□□□ 1.41
PDLIM2-207ENST00000409417 OPTNQ96CV9 577 aa23.86■■□□□ 1.41
PDLIM2-207ENST00000409417 MCM9Q9NXL9 1143 aa23.86■■□□□ 1.41
PDLIM2-207ENST00000409417 SLC4A4Q9Y6R1 1079 aa23.86■■□□□ 1.41
PDLIM2-207ENST00000409417 OTOFQ9HC10 1997 aa23.85■■□□□ 1.41
PDLIM2-207ENST00000409417 FAM196BA6NMK8 535 aa23.85■■□□□ 1.41
PDLIM2-207ENST00000409417 MKRN3Q13064 507 aaKnown RBP23.85■■□□□ 1.41
PDLIM2-207ENST00000409417 SPDYE5A6NIY4 337 aa23.84■■□□□ 1.41
PDLIM2-207ENST00000409417 M0R2C6 588 aa23.84■■□□□ 1.41
PDLIM2-207ENST00000409417 GPAA1O43292 621 aa23.84■■□□□ 1.41
PDLIM2-207ENST00000409417 CRACR2BQ8N4Y2 399 aaPredicted RBP23.84■■□□□ 1.41
PDLIM2-207ENST00000409417 DDRGK1Q96HY6 314 aa23.84■■□□□ 1.41
PDLIM2-207ENST00000409417 TRIM34Q9BYJ4 488 aa23.84■■□□□ 1.41
PDLIM2-207ENST00000409417 EHD4Q9H223 541 aa23.84■■□□□ 1.41
PDLIM2-207ENST00000409417 POLR3DP05423 398 aaPredicted RBP23.83■■□□□ 1.41
PDLIM2-207ENST00000409417 GNAT2P19087 354 aa23.83■■□□□ 1.41
PDLIM2-207ENST00000409417 GJA5P36382 358 aa23.83■■□□□ 1.41
PDLIM2-207ENST00000409417 SLC4A8Q2Y0W8 1093 aa23.83■■□□□ 1.41
PDLIM2-207ENST00000409417 TTC22Q5TAA0 569 aa23.83■■□□□ 1.41
PDLIM2-207ENST00000409417 CNKSR2Q8WXI2 1034 aa23.83■■□□□ 1.41
PDLIM2-207ENST00000409417 SEC62Q99442 399 aaKnown RBP23.83■■□□□ 1.41
PDLIM2-207ENST00000409417 SERPINB13Q9UIV8 391 aa23.83■■□□□ 1.41
PDLIM2-207ENST00000409417 PLCD1P51178 756 aa23.82■■□□□ 1.4
PDLIM2-207ENST00000409417 SCYL3Q8IZE3 742 aa23.82■■□□□ 1.4
PDLIM2-207ENST00000409417 OTUD5Q96G74 571 aa23.82■■□□□ 1.4
PDLIM2-207ENST00000409417 BEGAINQ9BUH8 593 aa23.82■■□□□ 1.4
PDLIM2-207ENST00000409417 DNAJC18Q9H819 358 aa23.82■■□□□ 1.4
PDLIM2-207ENST00000409417 PICK1Q9NRD5 415 aa23.82■■□□□ 1.4
PDLIM2-207ENST00000409417 PPATQ06203 517 aa23.81■■□□□ 1.4
PDLIM2-207ENST00000409417 GIMAP6Q6P9H5 292 aa23.81■■□□□ 1.4
PDLIM2-207ENST00000409417 HELLSQ9NRZ9 838 aa23.81■■□□□ 1.4
PDLIM2-207ENST00000409417 MANSC4A6NHS7 340 aaPredicted RBP23.81■■□□□ 1.4
PDLIM2-207ENST00000409417 GSG1L2A8MUP6 293 aa23.81■■□□□ 1.4
PDLIM2-207ENST00000409417 HSPA1AP0DMV8 641 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-207ENST00000409417 HSPA1BP0DMV9 641 aaKnown RBP23.81■■□□□ 1.4
PDLIM2-207ENST00000409417 MYH1P12882 1939 aa23.81■■□□□ 1.4
PDLIM2-207ENST00000409417 INHBEP58166 350 aa23.81■■□□□ 1.4
PDLIM2-207ENST00000409417 SREBF2Q12772 1141 aa23.81■■□□□ 1.4
PDLIM2-207ENST00000409417 GSPT1P15170 499 aaKnown RBP23.8■■□□□ 1.4
PDLIM2-207ENST00000409417 SDSP20132 328 aa23.8■■□□□ 1.4
PDLIM2-207ENST00000409417 CAP2P40123 477 aa23.8■■□□□ 1.4
PDLIM2-207ENST00000409417 TM4SF4P48230 202 aa23.8■■□□□ 1.4
PDLIM2-207ENST00000409417 PPIL2Q13356 520 aa23.8■■□□□ 1.4
PDLIM2-207ENST00000409417 TAOK2Q9UL54 1235 aa23.8■■□□□ 1.4
PDLIM2-207ENST00000409417 USP17L12C9JPN9 530 aa23.79■■□□□ 1.4
PDLIM2-207ENST00000409417 USP17L21D6R901 530 aa23.79■■□□□ 1.4
PDLIM2-207ENST00000409417 PTPRAP18433 802 aa23.79■■□□□ 1.4
PDLIM2-207ENST00000409417 RRP1BQ14684 758 aaKnown RBP23.79■■□□□ 1.4
PDLIM2-207ENST00000409417 AMOTL1Q8IY63 956 aa23.79■■□□□ 1.4
PDLIM2-207ENST00000409417 FAM227BQ96M60 508 aa23.79■■□□□ 1.4
PDLIM2-207ENST00000409417 SIPA1L1O43166 1804 aa23.79■■□□□ 1.4
PDLIM2-207ENST00000409417 DDX60LQ5H9U9 1706 aaKnown RBP23.79■■□□□ 1.4
PDLIM2-207ENST00000409417 PATL2C9JE40 543 aaKnown RBP23.78■■□□□ 1.4
PDLIM2-207ENST00000409417 IRF6O14896 467 aa23.78■■□□□ 1.4
PDLIM2-207ENST00000409417 CA12O43570 354 aa23.78■■□□□ 1.4
PDLIM2-207ENST00000409417 CYP2D6P10635 497 aa23.78■■□□□ 1.4
PDLIM2-207ENST00000409417 GTF2A2P52657 109 aa23.78■■□□□ 1.4
PDLIM2-207ENST00000409417 GABPAQ06546 454 aa23.78■■□□□ 1.4
PDLIM2-207ENST00000409417 C12orf60Q5U649 245 aa23.78■■□□□ 1.4
PDLIM2-207ENST00000409417 MS4A4AQ96JQ5 239 aa23.78■■□□□ 1.4
PDLIM2-207ENST00000409417 A0A0D9SFI3 127 aa23.77■■□□□ 1.4
PDLIM2-207ENST00000409417 HIP1O00291 1037 aa23.77■■□□□ 1.4
PDLIM2-207ENST00000409417 APPP05067 770 aa23.77■■□□□ 1.4
PDLIM2-207ENST00000409417 NMIQ13287 307 aaPredicted RBP23.77■■□□□ 1.4
PDLIM2-207ENST00000409417 MCMDC2Q4G0Z9 681 aa23.77■■□□□ 1.4
PDLIM2-207ENST00000409417 TATDN1Q6P1N9 297 aa23.77■■□□□ 1.4
PDLIM2-207ENST00000409417 CTR9Q6PD62 1173 aa23.77■■□□□ 1.4
PDLIM2-207ENST00000409417 PPP4R2Q9NY27 417 aa23.77■■□□□ 1.4
PDLIM2-207ENST00000409417 ZHX2Q9Y6X8 837 aa23.77■■□□□ 1.4
PDLIM2-207ENST00000409417 NAV1Q8NEY1 1877 aa23.77■■□□□ 1.4
PDLIM2-207ENST00000409417 EVX2Q03828 476 aa23.76■■□□□ 1.39
PDLIM2-207ENST00000409417 SNAPC2Q13487 334 aa23.76■■□□□ 1.39
PDLIM2-207ENST00000409417 CCDC129Q6ZRS4 1044 aa23.76■■□□□ 1.39
PDLIM2-207ENST00000409417 NACAP1Q9BZK3 213 aa23.76■■□□□ 1.39
PDLIM2-207ENST00000409417 EPB41L4AQ9HCS5 686 aaPredicted RBP23.76■■□□□ 1.39
PDLIM2-207ENST00000409417 DIAPH3Q9NSV4 1193 aa23.76■■□□□ 1.39
PDLIM2-207ENST00000409417 GINM1Q9NU53 330 aa23.76■■□□□ 1.39
PDLIM2-207ENST00000409417 ARPP21Q9UBL0 812 aaPredicted RBP23.76■■□□□ 1.39
PDLIM2-207ENST00000409417 KCNH4Q9UQ05 1017 aa23.76■■□□□ 1.39
PDLIM2-207ENST00000409417 TESPA1A2RU30 521 aaPredicted RBP23.75■■□□□ 1.39
PDLIM2-207ENST00000409417 SBK1Q52WX2 424 aa23.75■■□□□ 1.39
PDLIM2-207ENST00000409417 CYP2D7A0A087X1C5 515 aa23.75■■□□□ 1.39
PDLIM2-207ENST00000409417 FOXN1O15353 648 aa23.75■■□□□ 1.39
PDLIM2-207ENST00000409417 ASNSP08243 561 aa23.75■■□□□ 1.39
PDLIM2-207ENST00000409417 SHMT1P34896 483 aa23.75■■□□□ 1.39
PDLIM2-207ENST00000409417 IFNL3Q8IZI9 196 aa23.75■■□□□ 1.39
PDLIM2-207ENST00000409417 RNF186Q9NXI6 227 aa23.75■■□□□ 1.39
PDLIM2-207ENST00000409417 SAGE1Q9NXZ1 904 aa23.75■■□□□ 1.39
PDLIM2-207ENST00000409417 SWAP70Q9UH65 585 aa23.75■■□□□ 1.39
PDLIM2-207ENST00000409417 CXCL11O14625 94 aa23.74■■□□□ 1.39
PDLIM2-207ENST00000409417 CETPP11597 493 aa23.74■■□□□ 1.39
PDLIM2-207ENST00000409417 TDO2P48775 406 aa23.74■■□□□ 1.39
PDLIM2-207ENST00000409417 IFNL1Q8IU54 200 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms