RNA–Protein interactions for RNA: ENST00000409252.6

SH3D19-202, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SH3D19, Length 4,888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-202ENST00000409252 RFX5P48382 616 aaPredicted RBP9.74□□□□□ -0.85
SH3D19-202ENST00000409252 GMPSP49915 693 aaPredicted RBP9.74□□□□□ -0.85
SH3D19-202ENST00000409252 LRRC47Q8N1G4 583 aaKnown RBP9.74□□□□□ -0.85
SH3D19-202ENST00000409252 GPBP1L1Q9HC44 474 aaPredicted RBP9.74□□□□□ -0.85
SH3D19-202ENST00000409252 SASS6Q6UVJ0 657 aa9.74□□□□□ -0.85
SH3D19-202ENST00000409252 CCDC17Q96LX7 622 aa9.74□□□□□ -0.85
SH3D19-202ENST00000409252 RAB34Q9BZG1 259 aa9.74□□□□□ -0.85
SH3D19-202ENST00000409252 BIN2Q9UBW5 565 aaPredicted RBP9.74□□□□□ -0.85
SH3D19-202ENST00000409252 TM4SF1P30408 202 aa9.74□□□□□ -0.85
SH3D19-202ENST00000409252 PABPC4Q13310 644 aaKnown RBP eCLIP9.74□□□□□ -0.85
SH3D19-202ENST00000409252 ZNF589Q86UQ0 364 aaPredicted RBP9.74□□□□□ -0.85
SH3D19-202ENST00000409252 CPXCR1Q8N123 301 aa9.74□□□□□ -0.85
SH3D19-202ENST00000409252 C2orf69Q8N8R5 385 aa9.74□□□□□ -0.85
SH3D19-202ENST00000409252 TBC1D2Q9BYX2 928 aa9.74□□□□□ -0.85
SH3D19-202ENST00000409252 PAGR1Q9BTK6 254 aa9.73□□□□□ -0.85
SH3D19-202ENST00000409252 MYL10Q9BUA6 226 aa9.73□□□□□ -0.85
SH3D19-202ENST00000409252 MXD3Q9BW11 206 aa9.73□□□□□ -0.85
SH3D19-202ENST00000409252 POLLQ9UGP5 575 aa9.73□□□□□ -0.85
SH3D19-202ENST00000409252 SUGT1Q9Y2Z0 365 aa9.73□□□□□ -0.85
SH3D19-202ENST00000409252 PLCH1Q4KWH8 1693 aa9.73□□□□□ -0.85
SH3D19-202ENST00000409252 PRPF40AO75400 957 aaKnown RBP9.73□□□□□ -0.85
SH3D19-202ENST00000409252 SCARF1Q14162 830 aa9.73□□□□□ -0.85
SH3D19-202ENST00000409252 TMED8Q6PL24 325 aaPredicted RBP9.73□□□□□ -0.85
SH3D19-202ENST00000409252 KIFC2Q96AC6 838 aa9.73□□□□□ -0.85
SH3D19-202ENST00000409252 KLRK1P26718 216 aa9.73□□□□□ -0.85
SH3D19-202ENST00000409252 ANKRD20A12PQ8NF67 263 aa9.73□□□□□ -0.85
SH3D19-202ENST00000409252 ZSCAN10Q96SZ4 725 aaPredicted RBP9.73□□□□□ -0.85
SH3D19-202ENST00000409252 RGPD5Q99666 1765 aa9.73□□□□□ -0.85
SH3D19-202ENST00000409252 MKRN3Q13064 507 aaKnown RBP9.73□□□□□ -0.85
SH3D19-202ENST00000409252 BMP2KQ9NSY1 1161 aaPredicted RBP9.73□□□□□ -0.85
SH3D19-202ENST00000409252 CIZ1Q9ULV3 898 aaPredicted RBP9.73□□□□□ -0.85
SH3D19-202ENST00000409252 R3HCC1Q9Y3T6 440 aaKnown RBP9.73□□□□□ -0.85
SH3D19-202ENST00000409252 SAMM50Q9Y512 469 aa9.73□□□□□ -0.85
SH3D19-202ENST00000409252 SEC24BO95487 1268 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 KIAA2012Q0VF49 1180 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 OTUD7BQ6GQQ9 843 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 CCDC174Q6PII3 467 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 SCLT1Q96NL6 688 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 MED23Q9ULK4 1368 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 PCP11498 1178 aaKnown RBP9.72□□□□□ -0.85
SH3D19-202ENST00000409252 HSPA4P34932 840 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 TNKSO95271 1327 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 CYP2D7A0A087X1C5 515 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 PTPDC1A2A3K4 754 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 RPS12P25398 132 aaKnown RBP9.72□□□□□ -0.85
SH3D19-202ENST00000409252 CALML3P27482 149 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 RBM25P49756 843 aaKnown RBP9.72□□□□□ -0.85
SH3D19-202ENST00000409252 DYNLL2Q96FJ2 89 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 KAZALD1Q96I82 304 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 HOMER2Q9NSB8 354 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 GNA11P29992 359 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 CHURC1Q8WUH1 139 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 SLC10A4Q96EP9 437 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 ZNF609O15014 1411 aa9.72□□□□□ -0.85
SH3D19-202ENST00000409252 STX6O43752 255 aa9.71□□□□□ -0.85
SH3D19-202ENST00000409252 WWC2Q6AWC2 1192 aa9.71□□□□□ -0.85
SH3D19-202ENST00000409252 FBXO33Q7Z6M2 555 aa9.71□□□□□ -0.85
SH3D19-202ENST00000409252 FOXP4Q8IVH2 680 aaPredicted RBP9.71□□□□□ -0.85
SH3D19-202ENST00000409252 TRMT1LQ7Z2T5 733 aaKnown RBP9.71□□□□□ -0.85
SH3D19-202ENST00000409252 TOP1P11387 765 aaKnown RBP9.71□□□□□ -0.86
SH3D19-202ENST00000409252 USH1GQ495M9 461 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 SLFNL1Q499Z3 407 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 TDRD7Q8NHU6 1098 aaKnown RBP9.71□□□□□ -0.86
SH3D19-202ENST00000409252 PCMTD1Q96MG8 357 aaPredicted RBP9.71□□□□□ -0.86
SH3D19-202ENST00000409252 ZNF341Q9BYN7 854 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 RGPD2P0DJD1 1756 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 FRMPD2Q68DX3 1309 aaPredicted RBP9.71□□□□□ -0.86
SH3D19-202ENST00000409252 TRIM75PA6NK02 468 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 FLOT1O75955 427 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 USP14P54578 494 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 CASP7P55210 303 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 SLFN13Q68D06 897 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 CEP57L1Q8IYX8 460 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 PNMA1Q8ND90 353 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 WRNIP1Q96S55 665 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 STRBPQ96SI9 672 aaKnown RBP9.71□□□□□ -0.86
SH3D19-202ENST00000409252 GGA3Q9NZ52 723 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 DAGLAQ9Y4D2 1042 aa9.71□□□□□ -0.86
SH3D19-202ENST00000409252 EPB41L2O43491 1005 aaKnown RBP9.7□□□□□ -0.86
SH3D19-202ENST00000409252 MBD3O95983 291 aa9.7□□□□□ -0.86
SH3D19-202ENST00000409252 IBSPP21815 317 aaPredicted RBP9.7□□□□□ -0.86
SH3D19-202ENST00000409252 HOXA10P31260 410 aaPredicted RBP9.7□□□□□ -0.86
SH3D19-202ENST00000409252 NSMFQ6X4W1 530 aa9.7□□□□□ -0.86
SH3D19-202ENST00000409252 ZNF654Q8IZM8 581 aa9.7□□□□□ -0.86
SH3D19-202ENST00000409252 KRT2P35908 639 aa9.7□□□□□ -0.86
SH3D19-202ENST00000409252 KIF22Q14807 665 aa9.7□□□□□ -0.86
SH3D19-202ENST00000409252 AGBL3Q8NEM8 1001 aa9.7□□□□□ -0.86
SH3D19-202ENST00000409252 LZTS2Q9BRK4 669 aa9.7□□□□□ -0.86
SH3D19-202ENST00000409252 CCDC39Q9UFE4 941 aa9.7□□□□□ -0.86
SH3D19-202ENST00000409252 PPP4R3AQ6IN85 833 aa9.7□□□□□ -0.86
SH3D19-202ENST00000409252 FCHSD1Q86WN1 690 aa9.7□□□□□ -0.86
SH3D19-202ENST00000409252 SPICE1Q8N0Z3 855 aa9.7□□□□□ -0.86
SH3D19-202ENST00000409252 NSUN4Q96CB9 384 aaKnown RBP9.7□□□□□ -0.86
SH3D19-202ENST00000409252 LSG1Q9H089 658 aaKnown RBP9.7□□□□□ -0.86
SH3D19-202ENST00000409252 KANSL2Q9H9L4 492 aa9.7□□□□□ -0.86
SH3D19-202ENST00000409252 NCOA5Q9HCD5 579 aaKnown RBP9.7□□□□□ -0.86
SH3D19-202ENST00000409252 RPAP1Q9BWH6 1393 aaPredicted RBP9.7□□□□□ -0.86
SH3D19-202ENST00000409252 DHX8Q14562 1220 aaKnown RBP9.7□□□□□ -0.86
SH3D19-202ENST00000409252 ANGEL2Q5VTE6 544 aaKnown RBP9.7□□□□□ -0.86
SH3D19-202ENST00000409252 PROM2Q8N271 834 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms