RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 ZKSCAN4Q969J2 545 aaPredicted RBP20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 DDRGK1Q96HY6 314 aa20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 ZNF112Q9UJU3 913 aa20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 TRPM7Q96QT4 1865 aa20.6■□□□□ 0.89
PTCHD3P3-201ENST00000403073 PAPPA2Q9BXP8 1791 aa20.59■□□□□ 0.89
PTCHD3P3-201ENST00000403073 PHF20L1A8MW92 1017 aa20.59■□□□□ 0.89
PTCHD3P3-201ENST00000403073 INPP5BP32019 993 aa20.59■□□□□ 0.89
PTCHD3P3-201ENST00000403073 VEGFBP49765 207 aa20.59■□□□□ 0.89
PTCHD3P3-201ENST00000403073 CTR9Q6PD62 1173 aa20.59■□□□□ 0.89
PTCHD3P3-201ENST00000403073 IFNL3Q8IZI9 196 aa20.59■□□□□ 0.89
PTCHD3P3-201ENST00000403073 CRACR2BQ8N4Y2 399 aaPredicted RBP20.59■□□□□ 0.89
PTCHD3P3-201ENST00000403073 SLC10A4Q96EP9 437 aa20.59■□□□□ 0.89
PTCHD3P3-201ENST00000403073 CAPNS2Q96L46 248 aa20.59■□□□□ 0.89
PTCHD3P3-201ENST00000403073 EPB41L4AQ9HCS5 686 aaPredicted RBP20.59■□□□□ 0.89
PTCHD3P3-201ENST00000403073 SMIM22K7EJ46 135 aa20.58■□□□□ 0.89
PTCHD3P3-201ENST00000403073 FOXP2O15409 715 aa20.58■□□□□ 0.89
PTCHD3P3-201ENST00000403073 VGLL4Q14135 290 aa20.58■□□□□ 0.89
PTCHD3P3-201ENST00000403073 GIMAP6Q6P9H5 292 aa20.58■□□□□ 0.89
PTCHD3P3-201ENST00000403073 METTL16Q86W50 562 aaKnown RBP20.58■□□□□ 0.89
PTCHD3P3-201ENST00000403073 DNAJC18Q9H819 358 aa20.58■□□□□ 0.89
PTCHD3P3-201ENST00000403073 ELP3Q9H9T3 547 aa20.58■□□□□ 0.89
PTCHD3P3-201ENST00000403073 HERC5Q9UII4 1024 aaKnown RBP20.58■□□□□ 0.89
PTCHD3P3-201ENST00000403073 CCDC171Q6TFL3 1326 aa20.57■□□□□ 0.88
PTCHD3P3-201ENST00000403073 UNCXA6NJT0 531 aa20.57■□□□□ 0.88
PTCHD3P3-201ENST00000403073 RRP1BQ14684 758 aaKnown RBP20.57■□□□□ 0.88
PTCHD3P3-201ENST00000403073 C12orf60Q5U649 245 aa20.57■□□□□ 0.88
PTCHD3P3-201ENST00000403073 TRIM34Q9BYJ4 488 aa20.57■□□□□ 0.88
PTCHD3P3-201ENST00000403073 IL25Q9H293 177 aa20.57■□□□□ 0.88
PTCHD3P3-201ENST00000403073 SERPINB13Q9UIV8 391 aa20.57■□□□□ 0.88
PTCHD3P3-201ENST00000403073 CSADQ9Y600 493 aa20.57■□□□□ 0.88
PTCHD3P3-201ENST00000403073 WDR33Q9C0J8 1336 aaKnown RBP20.56■□□□□ 0.88
PTCHD3P3-201ENST00000403073 FAM155AB1AL88 458 aaPredicted RBP20.56■□□□□ 0.88
PTCHD3P3-201ENST00000403073 TDO2P48775 406 aa20.56■□□□□ 0.88
PTCHD3P3-201ENST00000403073 RASAL3Q86YV0 1011 aa20.56■□□□□ 0.88
PTCHD3P3-201ENST00000403073 CCDC102AQ96A19 550 aa20.56■□□□□ 0.88
PTCHD3P3-201ENST00000403073 DYNLL2Q96FJ2 89 aa20.56■□□□□ 0.88
PTCHD3P3-201ENST00000403073 NACAP1Q9BZK3 213 aa20.56■□□□□ 0.88
PTCHD3P3-201ENST00000403073 EHD4Q9H223 541 aa20.56■□□□□ 0.88
PTCHD3P3-201ENST00000403073 SNCAIPQ9Y6H5 919 aa20.56■□□□□ 0.88
PTCHD3P3-201ENST00000403073 MYH7P12883 1935 aa20.56■□□□□ 0.88
PTCHD3P3-201ENST00000403073 MINDY4BA8MYZ0 360 aa20.55■□□□□ 0.88
PTCHD3P3-201ENST00000403073 AOC2O75106 756 aa20.55■□□□□ 0.88
PTCHD3P3-201ENST00000403073 HSPD1P10809 573 aaKnown RBP20.55■□□□□ 0.88
PTCHD3P3-201ENST00000403073 ECE1P42892 770 aa20.55■□□□□ 0.88
PTCHD3P3-201ENST00000403073 MKRN3Q13064 507 aaKnown RBP20.55■□□□□ 0.88
PTCHD3P3-201ENST00000403073 SBK1Q52WX2 424 aa20.55■□□□□ 0.88
PTCHD3P3-201ENST00000403073 AMOTL1Q8IY63 956 aa20.55■□□□□ 0.88
PTCHD3P3-201ENST00000403073 CNKSR2Q8WXI2 1034 aa20.55■□□□□ 0.88
PTCHD3P3-201ENST00000403073 ARPP21Q9UBL0 812 aaPredicted RBP20.55■□□□□ 0.88
PTCHD3P3-201ENST00000403073 SLC10A3P09131 477 aa20.54■□□□□ 0.88
PTCHD3P3-201ENST00000403073 MFAP1P55081 439 aaKnown RBP20.54■□□□□ 0.88
PTCHD3P3-201ENST00000403073 GABPAQ06546 454 aa20.54■□□□□ 0.88
PTCHD3P3-201ENST00000403073 RUFY2Q8WXA3 655 aa20.54■□□□□ 0.88
PTCHD3P3-201ENST00000403073 ZIC5Q96T25 663 aa20.54■□□□□ 0.88
PTCHD3P3-201ENST00000403073 NAPBQ9H115 298 aa20.54■□□□□ 0.88
PTCHD3P3-201ENST00000403073 CTNND1O60716 968 aaKnown RBP20.53■□□□□ 0.88
PTCHD3P3-201ENST00000403073 JAG1P78504 1218 aa20.53■□□□□ 0.88
PTCHD3P3-201ENST00000403073 NOL9Q5SY16 702 aaKnown RBP20.53■□□□□ 0.88
PTCHD3P3-201ENST00000403073 TATDN1Q6P1N9 297 aa20.53■□□□□ 0.88
PTCHD3P3-201ENST00000403073 SCYL3Q8IZE3 742 aa20.53■□□□□ 0.88
PTCHD3P3-201ENST00000403073 STK11IPQ8N1F8 1099 aa20.53■□□□□ 0.88
PTCHD3P3-201ENST00000403073 SLC44A5Q8NCS7 719 aa20.53■□□□□ 0.88
PTCHD3P3-201ENST00000403073 WNK4Q96J92 1243 aa20.53■□□□□ 0.88
PTCHD3P3-201ENST00000403073 GTF3C3Q9Y5Q9 886 aa20.53■□□□□ 0.88
PTCHD3P3-201ENST00000403073 CDK5RAP2Q96SN8 1893 aa20.52■□□□□ 0.88
PTCHD3P3-201ENST00000403073 FGAP02671 866 aa20.52■□□□□ 0.88
PTCHD3P3-201ENST00000403073 SHMT1P34896 483 aa20.52■□□□□ 0.88
PTCHD3P3-201ENST00000403073 GJA5P36382 358 aa20.52■□□□□ 0.88
PTCHD3P3-201ENST00000403073 CAP2P40123 477 aa20.52■□□□□ 0.88
PTCHD3P3-201ENST00000403073 ALX1Q15699 326 aa20.52■□□□□ 0.88
PTCHD3P3-201ENST00000403073 SPRYD7Q5W111 196 aa20.52■□□□□ 0.88
PTCHD3P3-201ENST00000403073 OPTNQ96CV9 577 aa20.52■□□□□ 0.88
PTCHD3P3-201ENST00000403073 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.52■□□□□ 0.88
PTCHD3P3-201ENST00000403073 FOCADQ5VW36 1801 aa20.52■□□□□ 0.88
PTCHD3P3-201ENST00000403073 SGSM2O43147 1006 aa20.51■□□□□ 0.87
PTCHD3P3-201ENST00000403073 GDF11O95390 407 aa20.51■□□□□ 0.87
PTCHD3P3-201ENST00000403073 KIF23Q02241 960 aaPredicted RBP20.51■□□□□ 0.87
PTCHD3P3-201ENST00000403073 SHROOM1Q2M3G4 852 aaPredicted RBP20.51■□□□□ 0.87
PTCHD3P3-201ENST00000403073 OTUD5Q96G74 571 aa20.51■□□□□ 0.87
PTCHD3P3-201ENST00000403073 PICK1Q9NRD5 415 aa20.51■□□□□ 0.87
PTCHD3P3-201ENST00000403073 SPDYE5A6NIY4 337 aa20.5■□□□□ 0.87
PTCHD3P3-201ENST00000403073 CDK8P49336 464 aa20.5■□□□□ 0.87
PTCHD3P3-201ENST00000403073 PPARAQ07869 468 aa20.5■□□□□ 0.87
PTCHD3P3-201ENST00000403073 NOGQ13253 232 aa20.5■□□□□ 0.87
PTCHD3P3-201ENST00000403073 CERKLQ49MI3 558 aaPredicted RBP20.5■□□□□ 0.87
PTCHD3P3-201ENST00000403073 CCDC84Q86UT8 332 aaPredicted RBP20.5■□□□□ 0.87
PTCHD3P3-201ENST00000403073 ERO1BQ86YB8 467 aa20.5■□□□□ 0.87
PTCHD3P3-201ENST00000403073 RAD50Q92878 1312 aa20.5■□□□□ 0.87
PTCHD3P3-201ENST00000403073 CDC45O75419 566 aa20.49■□□□□ 0.87
PTCHD3P3-201ENST00000403073 PTPRAP18433 802 aa20.49■□□□□ 0.87
PTCHD3P3-201ENST00000403073 C16orf86Q6ZW13 317 aa20.49■□□□□ 0.87
PTCHD3P3-201ENST00000403073 SWAP70Q9UH65 585 aa20.49■□□□□ 0.87
PTCHD3P3-201ENST00000403073 ZHX2Q9Y6X8 837 aa20.49■□□□□ 0.87
PTCHD3P3-201ENST00000403073 DDX60LQ5H9U9 1706 aaKnown RBP20.49■□□□□ 0.87
PTCHD3P3-201ENST00000403073 AK9Q5TCS8 1911 aa20.49■□□□□ 0.87
PTCHD3P3-201ENST00000403073 SIPA1L1O43166 1804 aa20.48■□□□□ 0.87
PTCHD3P3-201ENST00000403073 NAV1Q8NEY1 1877 aa20.48■□□□□ 0.87
PTCHD3P3-201ENST00000403073 MAP2K2P36507 400 aa20.48■□□□□ 0.87
PTCHD3P3-201ENST00000403073 PTH1RQ03431 593 aa20.48■□□□□ 0.87
PTCHD3P3-201ENST00000403073 CTDSPL2Q05D32 466 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms