RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 MAN1B1Q9UKM7 699 aa22.44■■□□□ 1.18
COL13A1-205ENST00000398978 BAZ2BQ9UIF8 2168 aaKnown RBP22.43■■□□□ 1.18
COL13A1-205ENST00000398978 MAP3K12Q12852 859 aa22.43■■□□□ 1.18
COL13A1-205ENST00000398978 VSTM4Q8IW00 320 aa22.43■■□□□ 1.18
COL13A1-205ENST00000398978 MPHOSPH8Q99549 860 aa22.43■■□□□ 1.18
COL13A1-205ENST00000398978 SLAIN2Q9P270 581 aa22.43■■□□□ 1.18
COL13A1-205ENST00000398978 PSDA5PKW4 1024 aaPredicted RBP22.43■■□□□ 1.18
COL13A1-205ENST00000398978 NRDCO43847 1150 aa22.43■■□□□ 1.18
COL13A1-205ENST00000398978 RTN1Q16799 776 aa22.43■■□□□ 1.18
COL13A1-205ENST00000398978 SGMS1Q86VZ5 419 aa22.43■■□□□ 1.18
COL13A1-205ENST00000398978 CABP5Q9NP86 173 aa22.43■■□□□ 1.18
COL13A1-205ENST00000398978 PRDM1O75626 825 aa22.42■■□□□ 1.18
COL13A1-205ENST00000398978 FMNL1O95466 1100 aaPredicted RBP22.42■■□□□ 1.18
COL13A1-205ENST00000398978 ARHGAP29Q52LW3 1261 aa22.42■■□□□ 1.18
COL13A1-205ENST00000398978 TEX13AQ9BXU3 409 aaPredicted RBP22.42■■□□□ 1.18
COL13A1-205ENST00000398978 NFE2L3Q9Y4A8 694 aa22.42■■□□□ 1.18
COL13A1-205ENST00000398978 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.42■■□□□ 1.18
COL13A1-205ENST00000398978 MMP1P03956 469 aa22.42■■□□□ 1.18
COL13A1-205ENST00000398978 WTAPQ15007 396 aa22.42■■□□□ 1.18
COL13A1-205ENST00000398978 SUSD4Q5VX71 490 aa22.42■■□□□ 1.18
COL13A1-205ENST00000398978 SAMSN1Q9NSI8 373 aaKnown RBP22.42■■□□□ 1.18
COL13A1-205ENST00000398978 ABCF2Q9UG63 623 aa22.42■■□□□ 1.18
COL13A1-205ENST00000398978 MORC2Q9Y6X9 1032 aaPredicted RBP22.42■■□□□ 1.18
COL13A1-205ENST00000398978 CYP2D7A0A087X1C5 515 aa22.42■■□□□ 1.18
COL13A1-205ENST00000398978 ABCC12Q96J65 1359 aa22.42■■□□□ 1.18
COL13A1-205ENST00000398978 DESI2Q9BSY9 194 aa22.42■■□□□ 1.18
COL13A1-205ENST00000398978 SHANK3Q9BYB0 1731 aa22.42■■□□□ 1.18
COL13A1-205ENST00000398978 UQCRFS1P1P0C7P4 283 aa22.41■■□□□ 1.18
COL13A1-205ENST00000398978 ETF1P62495 437 aaKnown RBP22.41■■□□□ 1.18
COL13A1-205ENST00000398978 KLHL10Q6JEL2 608 aa22.41■■□□□ 1.18
COL13A1-205ENST00000398978 TRIM65Q6PJ69 517 aa22.41■■□□□ 1.18
COL13A1-205ENST00000398978 PAPPAQ13219 1627 aa22.41■■□□□ 1.18
COL13A1-205ENST00000398978 DCCP43146 1447 aa22.41■■□□□ 1.18
COL13A1-205ENST00000398978 FGFR2P21802 821 aa22.41■■□□□ 1.18
COL13A1-205ENST00000398978 STX17P56962 302 aa22.41■■□□□ 1.18
COL13A1-205ENST00000398978 POSTNQ15063 836 aa22.41■■□□□ 1.18
COL13A1-205ENST00000398978 SAFBQ15424 915 aaKnown RBP eCLIP22.41■■□□□ 1.18
COL13A1-205ENST00000398978 ADGRA1Q86SQ6 560 aa22.41■■□□□ 1.18
COL13A1-205ENST00000398978 L2HGDHQ9H9P8 463 aa22.41■■□□□ 1.18
COL13A1-205ENST00000398978 KCND1Q9NSA2 647 aa22.41■■□□□ 1.18
COL13A1-205ENST00000398978 LRP2BPQ9P2M1 347 aa22.41■■□□□ 1.18
COL13A1-205ENST00000398978 DDX60Q8IY21 1712 aaKnown RBP22.41■■□□□ 1.18
COL13A1-205ENST00000398978 ECM29Q5VYK3 1845 aa22.4■■□□□ 1.18
COL13A1-205ENST00000398978 SLC5A1P13866 664 aa22.4■■□□□ 1.18
COL13A1-205ENST00000398978 AFMP43652 599 aa22.4■■□□□ 1.18
COL13A1-205ENST00000398978 MDM2Q00987 491 aaPredicted RBP22.4■■□□□ 1.18
COL13A1-205ENST00000398978 REXO1L1PQ8IX06 675 aa22.4■■□□□ 1.18
COL13A1-205ENST00000398978 MED15Q96RN5 788 aa22.4■■□□□ 1.18
COL13A1-205ENST00000398978 FBXO2Q9UK22 296 aaPredicted RBP22.4■■□□□ 1.18
COL13A1-205ENST00000398978 KIF2AO00139 706 aaPredicted RBP22.4■■□□□ 1.18
COL13A1-205ENST00000398978 CCDC93Q567U6 631 aa22.4■■□□□ 1.18
COL13A1-205ENST00000398978 NOM1Q5C9Z4 860 aaKnown RBP22.4■■□□□ 1.18
COL13A1-205ENST00000398978 STAMQ92783 540 aa22.4■■□□□ 1.18
COL13A1-205ENST00000398978 SHISA4Q96DD7 197 aa22.4■■□□□ 1.18
COL13A1-205ENST00000398978 CARD6Q9BX69 1037 aa22.4■■□□□ 1.18
COL13A1-205ENST00000398978 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.4■■□□□ 1.18
COL13A1-205ENST00000398978 VPS54Q9P1Q0 977 aa22.4■■□□□ 1.18
COL13A1-205ENST00000398978 EARS2Q5JPH6 523 aaKnown RBP22.39■■□□□ 1.18
COL13A1-205ENST00000398978 TOGARAM2Q6ZUX3 1019 aa22.39■■□□□ 1.18
COL13A1-205ENST00000398978 ZNF512BQ96KM6 892 aaPredicted RBP22.39■■□□□ 1.18
COL13A1-205ENST00000398978 IFNAR1P17181 557 aa22.39■■□□□ 1.17
COL13A1-205ENST00000398978 LIFRP42702 1097 aa22.39■■□□□ 1.17
COL13A1-205ENST00000398978 TRIM22Q8IYM9 498 aa22.39■■□□□ 1.17
COL13A1-205ENST00000398978 SMYD4Q8IYR2 804 aaPredicted RBP22.39■■□□□ 1.17
COL13A1-205ENST00000398978 CSRNP2Q9H175 543 aa22.39■■□□□ 1.17
COL13A1-205ENST00000398978 CBFA2T2O43439 604 aa22.39■■□□□ 1.17
COL13A1-205ENST00000398978 CLCN6P51797 869 aa22.39■■□□□ 1.17
COL13A1-205ENST00000398978 KRT222Q8N1A0 295 aa22.39■■□□□ 1.17
COL13A1-205ENST00000398978 ATRNO75882 1429 aa22.39■■□□□ 1.17
COL13A1-205ENST00000398978 WNT7AO00755 349 aa22.38■■□□□ 1.17
COL13A1-205ENST00000398978 EVX2Q03828 476 aa22.38■■□□□ 1.17
COL13A1-205ENST00000398978 CPLX3Q8WVH0 158 aa22.38■■□□□ 1.17
COL13A1-205ENST00000398978 DHX58Q96C10 678 aa22.38■■□□□ 1.17
COL13A1-205ENST00000398978 MTF1Q14872 753 aa22.38■■□□□ 1.17
COL13A1-205ENST00000398978 KARSQ15046 597 aaKnown RBP22.38■■□□□ 1.17
COL13A1-205ENST00000398978 EPSTI1Q96J88 318 aa22.38■■□□□ 1.17
COL13A1-205ENST00000398978 WDR24Q96S15 920 aa22.38■■□□□ 1.17
COL13A1-205ENST00000398978 SOS2Q07890 1332 aaPredicted RBP22.38■■□□□ 1.17
COL13A1-205ENST00000398978 TMEM139Q8IV31 216 aa22.37■■□□□ 1.17
COL13A1-205ENST00000398978 VWA3AA6NCI4 1184 aa22.37■■□□□ 1.17
COL13A1-205ENST00000398978 ZNF654Q8IZM8 581 aa22.37■■□□□ 1.17
COL13A1-205ENST00000398978 CRACR2BQ8N4Y2 399 aaPredicted RBP22.37■■□□□ 1.17
COL13A1-205ENST00000398978 SMARCE1Q969G3 411 aa22.37■■□□□ 1.17
COL13A1-205ENST00000398978 IRX2Q9BZI1 471 aaPredicted RBP22.37■■□□□ 1.17
COL13A1-205ENST00000398978 PPP2R2CQ9Y2T4 447 aa22.37■■□□□ 1.17
COL13A1-205ENST00000398978 PLEKHG2Q9H7P9 1386 aa22.37■■□□□ 1.17
COL13A1-205ENST00000398978 A0A087X0B3 334 aa22.37■■□□□ 1.17
COL13A1-205ENST00000398978 A0A0U1RQJ8 604 aa22.37■■□□□ 1.17
COL13A1-205ENST00000398978 ERICH2A1L162 156 aa22.37■■□□□ 1.17
COL13A1-205ENST00000398978 PTPREP23469 700 aa22.37■■□□□ 1.17
COL13A1-205ENST00000398978 ATRIPQ8WXE1 791 aa22.37■■□□□ 1.17
COL13A1-205ENST00000398978 ACSBG1Q96GR2 724 aa22.37■■□□□ 1.17
COL13A1-205ENST00000398978 FAM237AA0A1B0GTK4 181 aa22.36■■□□□ 1.17
COL13A1-205ENST00000398978 SEC31AO94979 1220 aaKnown RBP22.36■■□□□ 1.17
COL13A1-205ENST00000398978 CYP7A1P22680 504 aa22.36■■□□□ 1.17
COL13A1-205ENST00000398978 SLC4A8Q2Y0W8 1093 aa22.36■■□□□ 1.17
COL13A1-205ENST00000398978 KRT23Q9C075 422 aa22.36■■□□□ 1.17
COL13A1-205ENST00000398978 SLFN14P0C7P3 912 aa22.36■■□□□ 1.17
COL13A1-205ENST00000398978 FANCBQ8NB91 859 aa22.36■■□□□ 1.17
COL13A1-205ENST00000398978 MNS1Q8NEH6 495 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms