RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 PPP2R2CQ9Y2T4 447 aa10.48□□□□□ -0.73
CDH23-203ENST00000398788 PHLPP2Q6ZVD8 1323 aa10.48□□□□□ -0.73
CDH23-203ENST00000398788 EIF4E1BA6NMX2 242 aaKnown RBP10.47□□□□□ -0.73
CDH23-203ENST00000398788 N4BP3O15049 544 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 RNMTO43148 476 aaKnown RBP10.47□□□□□ -0.73
CDH23-203ENST00000398788 PRC1O43663 620 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 GCFC2P16383 781 aaKnown RBP10.47□□□□□ -0.73
CDH23-203ENST00000398788 CCDC152Q4G0S7 254 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 DZIP3Q86Y13 1208 aaKnown RBP10.47□□□□□ -0.73
CDH23-203ENST00000398788 MMRN2Q9H8L6 949 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 HMG20BQ9P0W2 317 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 PCDH11XQ9BZA7 1347 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 PCDH11YQ9BZA8 1340 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 BAG3O95817 575 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 IFT88Q13099 833 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 RNF17Q9BXT8 1623 aaKnown RBP10.47□□□□□ -0.73
CDH23-203ENST00000398788 A0A1B0GVL5 298 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 HSF2BPO75031 334 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 A1BGP04217 495 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 NBPF7P0C2Y1 421 aaPredicted RBP10.47□□□□□ -0.73
CDH23-203ENST00000398788 CCZ1BP86790 482 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 CCZ1P86791 482 aaPredicted RBP10.47□□□□□ -0.73
CDH23-203ENST00000398788 TTLL12Q14166 644 aaPredicted RBP10.47□□□□□ -0.73
CDH23-203ENST00000398788 TPTE2Q6XPS3 522 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 ZNF594Q96JF6 807 aaPredicted RBP10.47□□□□□ -0.73
CDH23-203ENST00000398788 PSMD1Q99460 953 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 TMEM94Q12767 1356 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 ZMYND10O75800 440 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 LDHCP07864 332 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 STX17P56962 302 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 FAM98CQ17RN3 349 aaKnown RBP10.47□□□□□ -0.73
CDH23-203ENST00000398788 TMEM266Q2M3C6 531 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 GRIPAP1Q4V328 841 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 NBPF14Q5TI25 921 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 NAA16Q6N069 864 aaPredicted RBP10.47□□□□□ -0.73
CDH23-203ENST00000398788 TMEM87AQ8NBN3 555 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 RAB34Q9BZG1 259 aa10.47□□□□□ -0.73
CDH23-203ENST00000398788 ARHGEF10O15013 1369 aa10.46□□□□□ -0.73
CDH23-203ENST00000398788 PNMA6EA0A0J9YXQ4 647 aa10.46□□□□□ -0.73
CDH23-203ENST00000398788 AP1G2O75843 785 aa10.46□□□□□ -0.73
CDH23-203ENST00000398788 SEPT7Q16181 437 aaKnown RBP10.46□□□□□ -0.73
CDH23-203ENST00000398788 CCDC40Q4G0X9 1142 aa10.46□□□□□ -0.73
CDH23-203ENST00000398788 CREB3L3Q68CJ9 461 aa10.46□□□□□ -0.73
CDH23-203ENST00000398788 MAATS1Q7Z4T9 603 aa10.46□□□□□ -0.73
CDH23-203ENST00000398788 MIEF2Q96C03 454 aa10.46□□□□□ -0.73
CDH23-203ENST00000398788 ZSCAN16Q9H4T2 348 aaPredicted RBP10.46□□□□□ -0.73
CDH23-203ENST00000398788 BIN2Q9UBW5 565 aaPredicted RBP10.46□□□□□ -0.73
CDH23-203ENST00000398788 EDC4Q6P2E9 1401 aaKnown RBP10.46□□□□□ -0.73
CDH23-203ENST00000398788 REREQ9P2R6 1566 aa10.46□□□□□ -0.73
CDH23-203ENST00000398788 IRS4O14654 1257 aaPredicted RBP10.46□□□□□ -0.74
CDH23-203ENST00000398788 ARHGAP6O43182 974 aa10.46□□□□□ -0.74
CDH23-203ENST00000398788 ADKP55263 362 aaKnown RBP10.46□□□□□ -0.74
CDH23-203ENST00000398788 SWT1Q5T5J6 900 aaKnown RBP10.46□□□□□ -0.74
CDH23-203ENST00000398788 PLIN2Q99541 437 aa10.46□□□□□ -0.74
CDH23-203ENST00000398788 DBNDD2Q9BQY9 259 aa10.46□□□□□ -0.74
CDH23-203ENST00000398788 CEP152O94986 1710 aa10.46□□□□□ -0.74
CDH23-203ENST00000398788 AGLP35573 1532 aa10.46□□□□□ -0.74
CDH23-203ENST00000398788 OPA1O60313 960 aa10.46□□□□□ -0.74
CDH23-203ENST00000398788 HPDP32754 393 aaPredicted RBP10.46□□□□□ -0.74
CDH23-203ENST00000398788 KIF5BP33176 963 aa10.46□□□□□ -0.74
CDH23-203ENST00000398788 MTX1Q13505 466 aa10.46□□□□□ -0.74
CDH23-203ENST00000398788 RTN1Q16799 776 aa10.46□□□□□ -0.74
CDH23-203ENST00000398788 IFIT1BQ5T764 474 aaKnown RBP10.46□□□□□ -0.74
CDH23-203ENST00000398788 FUT8Q9BYC5 575 aa10.46□□□□□ -0.74
CDH23-203ENST00000398788 TRIM35Q9UPQ4 493 aa10.46□□□□□ -0.74
CDH23-203ENST00000398788 MAP3K5Q99683 1374 aa10.46□□□□□ -0.74
CDH23-203ENST00000398788 PRPF4BQ13523 1007 aaKnown RBP10.45□□□□□ -0.74
CDH23-203ENST00000398788 EDC3Q96F86 508 aaKnown RBP10.45□□□□□ -0.74
CDH23-203ENST00000398788 GOPCQ9HD26 462 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 JADE2Q9NQC1 790 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 USP21Q9UK80 565 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 UQCRFS1P1P0C7P4 283 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 IL13P35225 146 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 OTUD7BQ6GQQ9 843 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 HEATR3Q7Z4Q2 680 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 SRGAP1Q7Z6B7 1085 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 SLF2Q8IX21 1173 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 SIRT2Q8IXJ6 389 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 SMARCC2Q8TAQ2 1214 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 ESR2Q92731 530 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 CRNKL1Q9BZJ0 848 aaKnown RBP10.45□□□□□ -0.74
CDH23-203ENST00000398788 SNX14Q9Y5W7 946 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 SOS1Q07889 1333 aaPredicted RBP10.45□□□□□ -0.74
CDH23-203ENST00000398788 SBNO1A3KN83 1393 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 VWDEQ8N2E2 1590 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 IRF6O14896 467 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 TSPY3P0CV98 308 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 TSPY8P0CW00 308 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 ARMC3Q5W041 872 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 RUFY3Q7L099 469 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 TRIM47Q96LD4 638 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 ABCC3O15438 1527 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 ZFYVE9O95405 1425 aa10.45□□□□□ -0.74
CDH23-203ENST00000398788 SMIM24O75264 130 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 PRDM1O75626 825 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 ZRANB2O95218 330 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDH23-203ENST00000398788 LONRF3Q496Y0 759 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 CCDC50Q8IVM0 306 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 REXO1L1PQ8IX06 675 aa10.44□□□□□ -0.74
CDH23-203ENST00000398788 CTNNBL1Q8WYA6 563 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms