RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 DDRGK1Q96HY6 314 aa25.14■■□□□ 1.62
SEC13-207ENST00000397105 STRBPQ96SI9 672 aaKnown RBP25.14■■□□□ 1.62
SEC13-207ENST00000397105 DCP1AQ9NPI6 582 aaPredicted RBP25.14■■□□□ 1.62
SEC13-207ENST00000397105 MCM9Q9NXL9 1143 aa25.14■■□□□ 1.62
SEC13-207ENST00000397105 AK9Q5TCS8 1911 aa25.14■■□□□ 1.61
SEC13-207ENST00000397105 CTNND1O60716 968 aaKnown RBP25.13■■□□□ 1.61
SEC13-207ENST00000397105 POLR3DP05423 398 aaPredicted RBP25.13■■□□□ 1.61
SEC13-207ENST00000397105 SLURP2P0DP57 97 aa25.13■■□□□ 1.61
SEC13-207ENST00000397105 NOL9Q5SY16 702 aaKnown RBP25.13■■□□□ 1.61
SEC13-207ENST00000397105 METTL16Q86W50 562 aaKnown RBP25.13■■□□□ 1.61
SEC13-207ENST00000397105 ERO1BQ86YB8 467 aa25.13■■□□□ 1.61
SEC13-207ENST00000397105 SPDYE5A6NIY4 337 aa25.12■■□□□ 1.61
SEC13-207ENST00000397105 FAM196BA6NMK8 535 aa25.12■■□□□ 1.61
SEC13-207ENST00000397105 HSPA1AP0DMV8 641 aaKnown RBP25.12■■□□□ 1.61
SEC13-207ENST00000397105 HSPA1BP0DMV9 641 aaKnown RBP25.12■■□□□ 1.61
SEC13-207ENST00000397105 SLC4A8Q2Y0W8 1093 aa25.12■■□□□ 1.61
SEC13-207ENST00000397105 ZMYM1Q5SVZ6 1142 aa25.12■■□□□ 1.61
SEC13-207ENST00000397105 SCYL3Q8IZE3 742 aa25.12■■□□□ 1.61
SEC13-207ENST00000397105 PICK1Q9NRD5 415 aa25.12■■□□□ 1.61
SEC13-207ENST00000397105 MANSC4A6NHS7 340 aaPredicted RBP25.11■■□□□ 1.61
SEC13-207ENST00000397105 M0R2C6 588 aa25.11■■□□□ 1.61
SEC13-207ENST00000397105 GPAA1O43292 621 aa25.11■■□□□ 1.61
SEC13-207ENST00000397105 GNAT2P19087 354 aa25.11■■□□□ 1.61
SEC13-207ENST00000397105 INHBEP58166 350 aa25.11■■□□□ 1.61
SEC13-207ENST00000397105 SREBF2Q12772 1141 aa25.11■■□□□ 1.61
SEC13-207ENST00000397105 OTUD5Q96G74 571 aa25.11■■□□□ 1.61
SEC13-207ENST00000397105 EHD4Q9H223 541 aa25.11■■□□□ 1.61
SEC13-207ENST00000397105 SERPINB13Q9UIV8 391 aa25.11■■□□□ 1.61
SEC13-207ENST00000397105 GJA5P36382 358 aa25.1■■□□□ 1.61
SEC13-207ENST00000397105 TM4SF4P48230 202 aa25.1■■□□□ 1.61
SEC13-207ENST00000397105 PPATQ06203 517 aa25.1■■□□□ 1.61
SEC13-207ENST00000397105 ERICH6BQ5W0A0 696 aa25.1■■□□□ 1.61
SEC13-207ENST00000397105 AMOTL1Q8IY63 956 aa25.1■■□□□ 1.61
SEC13-207ENST00000397105 CNKSR2Q8WXI2 1034 aa25.1■■□□□ 1.61
SEC13-207ENST00000397105 PLCD1P51178 756 aa25.09■■□□□ 1.61
SEC13-207ENST00000397105 SEC62Q99442 399 aaKnown RBP25.09■■□□□ 1.61
SEC13-207ENST00000397105 THSD7BQ9C0I4 1608 aa25.08■■□□□ 1.61
SEC13-207ENST00000397105 CA12O43570 354 aa25.08■■□□□ 1.61
SEC13-207ENST00000397105 PPIL2Q13356 520 aa25.08■■□□□ 1.61
SEC13-207ENST00000397105 TTC22Q5TAA0 569 aa25.08■■□□□ 1.61
SEC13-207ENST00000397105 GIMAP6Q6P9H5 292 aa25.08■■□□□ 1.61
SEC13-207ENST00000397105 HELLSQ9NRZ9 838 aa25.08■■□□□ 1.61
SEC13-207ENST00000397105 PATL2C9JE40 543 aaKnown RBP25.07■■□□□ 1.6
SEC13-207ENST00000397105 CAP2P40123 477 aa25.07■■□□□ 1.6
SEC13-207ENST00000397105 GTF2A2P52657 109 aa25.07■■□□□ 1.6
SEC13-207ENST00000397105 DNAJC18Q9H819 358 aa25.07■■□□□ 1.6
SEC13-207ENST00000397105 TAOK2Q9UL54 1235 aa25.07■■□□□ 1.6
SEC13-207ENST00000397105 GSG1L2A8MUP6 293 aa25.06■■□□□ 1.6
SEC13-207ENST00000397105 USP17L12C9JPN9 530 aa25.06■■□□□ 1.6
SEC13-207ENST00000397105 USP17L21D6R901 530 aa25.06■■□□□ 1.6
SEC13-207ENST00000397105 IRF6O14896 467 aa25.06■■□□□ 1.6
SEC13-207ENST00000397105 APPP05067 770 aa25.06■■□□□ 1.6
SEC13-207ENST00000397105 PTPRAP18433 802 aa25.06■■□□□ 1.6
SEC13-207ENST00000397105 SDSP20132 328 aa25.06■■□□□ 1.6
SEC13-207ENST00000397105 MYH7P12883 1935 aa25.06■■□□□ 1.6
SEC13-207ENST00000397105 FOCADQ5VW36 1801 aa25.05■■□□□ 1.6
SEC13-207ENST00000397105 HIP1O00291 1037 aa25.05■■□□□ 1.6
SEC13-207ENST00000397105 SNAPC2Q13487 334 aa25.05■■□□□ 1.6
SEC13-207ENST00000397105 MCMDC2Q4G0Z9 681 aa25.05■■□□□ 1.6
SEC13-207ENST00000397105 C12orf60Q5U649 245 aa25.05■■□□□ 1.6
SEC13-207ENST00000397105 TATDN1Q6P1N9 297 aa25.05■■□□□ 1.6
SEC13-207ENST00000397105 MS4A4AQ96JQ5 239 aa25.05■■□□□ 1.6
SEC13-207ENST00000397105 NACAP1Q9BZK3 213 aa25.05■■□□□ 1.6
SEC13-207ENST00000397105 ZHX2Q9Y6X8 837 aa25.05■■□□□ 1.6
SEC13-207ENST00000397105 TESPA1A2RU30 521 aaPredicted RBP25.04■■□□□ 1.6
SEC13-207ENST00000397105 FOXN1O15353 648 aa25.04■■□□□ 1.6
SEC13-207ENST00000397105 CYP2D6P10635 497 aa25.04■■□□□ 1.6
SEC13-207ENST00000397105 RRP1BQ14684 758 aaKnown RBP25.04■■□□□ 1.6
SEC13-207ENST00000397105 CTR9Q6PD62 1173 aa25.04■■□□□ 1.6
SEC13-207ENST00000397105 FAM227BQ96M60 508 aa25.04■■□□□ 1.6
SEC13-207ENST00000397105 GINM1Q9NU53 330 aa25.04■■□□□ 1.6
SEC13-207ENST00000397105 RNF186Q9NXI6 227 aa25.04■■□□□ 1.6
SEC13-207ENST00000397105 SAGE1Q9NXZ1 904 aa25.04■■□□□ 1.6
SEC13-207ENST00000397105 ARPP21Q9UBL0 812 aaPredicted RBP25.04■■□□□ 1.6
SEC13-207ENST00000397105 CDK5RAP2Q96SN8 1893 aa25.04■■□□□ 1.6
SEC13-207ENST00000397105 OTOFQ9HC10 1997 aa25.04■■□□□ 1.6
SEC13-207ENST00000397105 CETPP11597 493 aa25.03■■□□□ 1.6
SEC13-207ENST00000397105 GSPT1P15170 499 aaKnown RBP25.03■■□□□ 1.6
SEC13-207ENST00000397105 CTCFP49711 727 aaPredicted RBP25.03■■□□□ 1.6
SEC13-207ENST00000397105 GABPAQ06546 454 aa25.03■■□□□ 1.6
SEC13-207ENST00000397105 NMIQ13287 307 aaPredicted RBP25.03■■□□□ 1.6
SEC13-207ENST00000397105 OTUD7BQ6GQQ9 843 aa25.03■■□□□ 1.6
SEC13-207ENST00000397105 DIAPH3Q9NSV4 1193 aa25.03■■□□□ 1.6
SEC13-207ENST00000397105 CCL15-CCL14A0A0B4J2E2 113 aa25.02■■□□□ 1.6
SEC13-207ENST00000397105 CXCL11O14625 94 aa25.02■■□□□ 1.6
SEC13-207ENST00000397105 TRPA1O75762 1119 aa25.02■■□□□ 1.6
SEC13-207ENST00000397105 ALDH1A1P00352 501 aa25.02■■□□□ 1.6
SEC13-207ENST00000397105 ASNSP08243 561 aa25.02■■□□□ 1.6
SEC13-207ENST00000397105 TDO2P48775 406 aa25.02■■□□□ 1.6
SEC13-207ENST00000397105 CCL15Q16663 113 aa25.02■■□□□ 1.6
SEC13-207ENST00000397105 SBK1Q52WX2 424 aa25.02■■□□□ 1.6
SEC13-207ENST00000397105 CCDC129Q6ZRS4 1044 aa25.02■■□□□ 1.6
SEC13-207ENST00000397105 IFNL1Q8IU54 200 aa25.02■■□□□ 1.6
SEC13-207ENST00000397105 PPP4R2Q9NY27 417 aa25.02■■□□□ 1.6
SEC13-207ENST00000397105 SWAP70Q9UH65 585 aa25.02■■□□□ 1.6
SEC13-207ENST00000397105 KCNH4Q9UQ05 1017 aa25.02■■□□□ 1.6
SEC13-207ENST00000397105 CYP2D7A0A087X1C5 515 aa25.01■■□□□ 1.59
SEC13-207ENST00000397105 A0A0D9SFI3 127 aa25.01■■□□□ 1.59
SEC13-207ENST00000397105 CERKLQ49MI3 558 aaPredicted RBP25.01■■□□□ 1.59
SEC13-207ENST00000397105 IFNL3Q8IZI9 196 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms