RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 GNL3LQ9NVN8 582 aaKnown RBP10.55□□□□□ -0.72
SCFD1-202ENST00000396629 DENND2AQ9ULE3 1009 aa10.55□□□□□ -0.72
SCFD1-202ENST00000396629 FRMPD3Q5JV73 1810 aa10.54□□□□□ -0.72
SCFD1-202ENST00000396629 SEMA3EO15041 775 aa10.54□□□□□ -0.72
SCFD1-202ENST00000396629 COL6A1P12109 1028 aa10.54□□□□□ -0.72
SCFD1-202ENST00000396629 ZSCAN29Q8IWY8 852 aaPredicted RBP10.54□□□□□ -0.72
SCFD1-202ENST00000396629 TBC1D2Q9BYX2 928 aa10.54□□□□□ -0.72
SCFD1-202ENST00000396629 USP44Q9H0E7 712 aa10.54□□□□□ -0.72
SCFD1-202ENST00000396629 MORF4L1Q9UBU8 362 aa10.54□□□□□ -0.72
SCFD1-202ENST00000396629 PABPC4Q13310 644 aaKnown RBP eCLIP10.53□□□□□ -0.723e-10■■■□□ 16.3
SCFD1-202ENST00000396629 TRIB2Q92519 343 aa10.53□□□□□ -0.72
SCFD1-202ENST00000396629 OSBPL5Q9H0X9 879 aaPredicted RBP10.53□□□□□ -0.72
SCFD1-202ENST00000396629 SALL2Q9Y467 1007 aaPredicted RBP10.53□□□□□ -0.72
SCFD1-202ENST00000396629 ATP2B3Q16720 1220 aa10.53□□□□□ -0.72
SCFD1-202ENST00000396629 SH3D19Q5HYK7 790 aa10.53□□□□□ -0.72
SCFD1-202ENST00000396629 ZGPATQ8N5A5 531 aaKnown RBP10.53□□□□□ -0.72
SCFD1-202ENST00000396629 GUCD1Q96NT3 240 aa10.53□□□□□ -0.72
SCFD1-202ENST00000396629 ASCC2Q9H1I8 757 aaPredicted RBP10.53□□□□□ -0.72
SCFD1-202ENST00000396629 FBXO3Q9UK99 471 aa10.53□□□□□ -0.72
SCFD1-202ENST00000396629 MAST2Q6P0Q8 1798 aa10.52□□□□□ -0.72
SCFD1-202ENST00000396629 XRCC5P13010 732 aaKnown RBP10.52□□□□□ -0.73
SCFD1-202ENST00000396629 PHKA1P46020 1223 aa10.52□□□□□ -0.73
SCFD1-202ENST00000396629 SPP2Q13103 211 aa10.52□□□□□ -0.73
SCFD1-202ENST00000396629 SLF2Q8IX21 1173 aa10.52□□□□□ -0.73
SCFD1-202ENST00000396629 ZNF280CQ8ND82 737 aa10.52□□□□□ -0.73
SCFD1-202ENST00000396629 UNC80Q8N2C7 3258 aa10.52□□□□□ -0.73
SCFD1-202ENST00000396629 CIAO1O76071 339 aa10.51□□□□□ -0.73
SCFD1-202ENST00000396629 LRRC26Q2I0M4 334 aa10.51□□□□□ -0.73
SCFD1-202ENST00000396629 TRMT44Q8IYL2 757 aaKnown RBP10.51□□□□□ -0.73
SCFD1-202ENST00000396629 MRPL50Q8N5N7 158 aaKnown RBP10.51□□□□□ -0.73
SCFD1-202ENST00000396629 PDS5AQ29RF7 1337 aaKnown RBP10.51□□□□□ -0.73
SCFD1-202ENST00000396629 PRKAR2AP13861 404 aaKnown RBP10.51□□□□□ -0.73
SCFD1-202ENST00000396629 CYP2B6P20813 491 aa10.51□□□□□ -0.73
SCFD1-202ENST00000396629 BTDP43251 543 aa10.51□□□□□ -0.73
SCFD1-202ENST00000396629 HMGCS2P54868 508 aa10.51□□□□□ -0.73
SCFD1-202ENST00000396629 RHBDL3P58872 404 aa10.51□□□□□ -0.73
SCFD1-202ENST00000396629 PICALMQ13492 652 aa10.51□□□□□ -0.73
SCFD1-202ENST00000396629 LHX8Q68G74 356 aa10.51□□□□□ -0.73
SCFD1-202ENST00000396629 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.51□□□□□ -0.735e-6■■■□□ 17
SCFD1-202ENST00000396629 CEP126Q9P2H0 1117 aa10.51□□□□□ -0.73
SCFD1-202ENST00000396629 MROH7-TTC4A0A0A0MT08 1334 aa10.51□□□□□ -0.73
SCFD1-202ENST00000396629 PTPRCP08575 1304 aa10.51□□□□□ -0.73
SCFD1-202ENST00000396629 GPR75-ASB3A0A0A6YYF3 556 aa10.5□□□□□ -0.73
SCFD1-202ENST00000396629 USP17L5A8MUK1 530 aa10.5□□□□□ -0.73
SCFD1-202ENST00000396629 CAP2P40123 477 aa10.5□□□□□ -0.73
SCFD1-202ENST00000396629 MDM2Q00987 491 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-202ENST00000396629 CACNB2Q08289 660 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-202ENST00000396629 RRP1BQ14684 758 aaKnown RBP10.5□□□□□ -0.73
SCFD1-202ENST00000396629 DZIP1Q86YF9 867 aaKnown RBP10.5□□□□□ -0.73
SCFD1-202ENST00000396629 USP6NLQ92738 828 aa10.5□□□□□ -0.73
SCFD1-202ENST00000396629 NUDT12Q9BQG2 462 aa10.5□□□□□ -0.73
SCFD1-202ENST00000396629 LTBP2Q14767 1821 aa10.5□□□□□ -0.73
SCFD1-202ENST00000396629 FAM196BA6NMK8 535 aa10.5□□□□□ -0.73
SCFD1-202ENST00000396629 MAP4K4O95819 1239 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-202ENST00000396629 HOXA7P31268 230 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-202ENST00000396629 SPTY2D1Q68D10 685 aaPredicted RBP10.5□□□□□ -0.73
SCFD1-202ENST00000396629 CCDC102BQ68D86 513 aa10.5□□□□□ -0.73
SCFD1-202ENST00000396629 SOCS4Q8WXH5 440 aa10.5□□□□□ -0.73
SCFD1-202ENST00000396629 SIPA1L1O43166 1804 aa10.5□□□□□ -0.73
SCFD1-202ENST00000396629 ADORA1P30542 326 aa10.49□□□□□ -0.73
SCFD1-202ENST00000396629 P2RX7Q99572 595 aaKnown RBP10.49□□□□□ -0.73
SCFD1-202ENST00000396629 WDR18Q9BV38 432 aa10.49□□□□□ -0.73
SCFD1-202ENST00000396629 SIL1Q9H173 461 aa10.49□□□□□ -0.73
SCFD1-202ENST00000396629 ZKSCAN1P17029 563 aaPredicted RBP10.48□□□□□ -0.73
SCFD1-202ENST00000396629 CCND3P30281 292 aaPredicted RBP10.48□□□□□ -0.73
SCFD1-202ENST00000396629 IL15P40933 162 aaPredicted RBP10.48□□□□□ -0.73
SCFD1-202ENST00000396629 RASGRF1Q13972 1273 aa10.48□□□□□ -0.73
SCFD1-202ENST00000396629 GPRC5AQ8NFJ5 357 aa10.48□□□□□ -0.73
SCFD1-202ENST00000396629 ZNF384Q8TF68 577 aa10.48□□□□□ -0.73
SCFD1-202ENST00000396629 AS3MTQ9HBK9 375 aa10.48□□□□□ -0.73
SCFD1-202ENST00000396629 TXNRD2Q9NNW7 524 aa10.48□□□□□ -0.73
SCFD1-202ENST00000396629 ABCF2Q9UG63 623 aa10.48□□□□□ -0.73
SCFD1-202ENST00000396629 MAPK4P31152 587 aa10.48□□□□□ -0.73
SCFD1-202ENST00000396629 IRX3P78415 501 aaPredicted RBP10.48□□□□□ -0.73
SCFD1-202ENST00000396629 MECOMQ03112 1051 aa10.48□□□□□ -0.73
SCFD1-202ENST00000396629 MORN1Q5T089 497 aa10.48□□□□□ -0.73
SCFD1-202ENST00000396629 CDK5RAP2Q96SN8 1893 aa10.47□□□□□ -0.73
SCFD1-202ENST00000396629 RLFQ13129 1914 aa10.47□□□□□ -0.73
SCFD1-202ENST00000396629 RGS2P41220 211 aa10.47□□□□□ -0.73
SCFD1-202ENST00000396629 BACE1P56817 501 aa10.47□□□□□ -0.73
SCFD1-202ENST00000396629 HERVK_113P62684 666 aa10.47□□□□□ -0.73
SCFD1-202ENST00000396629 PDE3AQ14432 1141 aa10.47□□□□□ -0.73
SCFD1-202ENST00000396629 CCL14Q16627 93 aa10.47□□□□□ -0.73
SCFD1-202ENST00000396629 Q3C1V9 767 aa10.47□□□□□ -0.73
SCFD1-202ENST00000396629 ZNF697Q5TEC3 545 aa10.47□□□□□ -0.73
SCFD1-202ENST00000396629 ERICH6Q7L0X2 663 aa10.47□□□□□ -0.73
SCFD1-202ENST00000396629 FAM161BQ96MY7 647 aa10.47□□□□□ -0.73
SCFD1-202ENST00000396629 PRDM6Q9NQX0 595 aa10.47□□□□□ -0.73
SCFD1-202ENST00000396629 RBPJLQ9UBG7 517 aa10.47□□□□□ -0.73
SCFD1-202ENST00000396629 HERC5Q9UII4 1024 aaKnown RBP10.47□□□□□ -0.73
SCFD1-202ENST00000396629 FOCADQ5VW36 1801 aa10.46□□□□□ -0.73
SCFD1-202ENST00000396629 PEX10O60683 326 aa10.46□□□□□ -0.73
SCFD1-202ENST00000396629 LDHCP07864 332 aa10.46□□□□□ -0.73
SCFD1-202ENST00000396629 LBHD1Q9BQE6 289 aaPredicted RBP10.46□□□□□ -0.73
SCFD1-202ENST00000396629 MRS2Q9HD23 443 aa10.46□□□□□ -0.73
SCFD1-202ENST00000396629 TMOD4Q9NZQ9 345 aa10.46□□□□□ -0.73
SCFD1-202ENST00000396629 C19orf81C9J6K1 198 aa10.46□□□□□ -0.74
SCFD1-202ENST00000396629 ERVK-9P63128 1117 aa10.46□□□□□ -0.74
SCFD1-202ENST00000396629 ERVK-24P63145 666 aa10.46□□□□□ -0.74
SCFD1-202ENST00000396629 MTMR2Q13614 643 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms