RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 IRX3P78415 501 aaPredicted RBP20.71■□□□□ 0.91
HERPUD2-202ENST00000396081 NR1I3Q14994 352 aa20.71■□□□□ 0.91
HERPUD2-202ENST00000396081 APOA5Q6Q788 366 aa20.71■□□□□ 0.91
HERPUD2-202ENST00000396081 ARHGEF25Q86VW2 580 aa20.71■□□□□ 0.91
HERPUD2-202ENST00000396081 AKAP17AQ02040 695 aaKnown RBP20.7■□□□□ 0.9
HERPUD2-202ENST00000396081 HNRNPLLQ8WVV9 542 aaKnown RBP20.7■□□□□ 0.9
HERPUD2-202ENST00000396081 MED15Q96RN5 788 aa20.7■□□□□ 0.9
HERPUD2-202ENST00000396081 ZBTB3Q9H5J0 574 aa20.7■□□□□ 0.9
HERPUD2-202ENST00000396081 ABL1P00519 1130 aa20.7■□□□□ 0.9
HERPUD2-202ENST00000396081 MDM2Q00987 491 aaPredicted RBP20.7■□□□□ 0.9
HERPUD2-202ENST00000396081 APPBP2Q92624 585 aa20.7■□□□□ 0.9
HERPUD2-202ENST00000396081 INCENPQ9NQS7 918 aa20.7■□□□□ 0.9
HERPUD2-202ENST00000396081 AKAP2Q9Y2D5 859 aa20.7■□□□□ 0.9
HERPUD2-202ENST00000396081 CASP14P31944 242 aa20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 NOP2P46087 812 aaKnown RBP20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 SAFBQ15424 915 aaKnown RBP eCLIP20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 PAXIP1Q6ZW49 1069 aaPredicted RBP20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 PLBD2Q8NHP8 589 aa20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 XAGE2Q96GT9 111 aa20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 CASP1P29466 404 aa20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 TTC31Q49AM3 519 aaPredicted RBP20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 USP49Q70CQ1 688 aa20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 PANX2Q96RD6 677 aa20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 FAM204AQ9H8W3 233 aa20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 CWC25Q9NXE8 425 aaPredicted RBP20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 EIF3CLB5ME19 914 aaKnown RBP20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 TBC1D10CQ8IV04 446 aa20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 NOA1Q8NC60 698 aaKnown RBP20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 GDAP1L1Q96MZ0 367 aa20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 EIF3CQ99613 913 aaKnown RBP20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 GPR108Q9NPR9 543 aa20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 SEC31BQ9NQW1 1179 aa20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 TOMM22Q9NS69 142 aa20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 ZNF330Q9Y3S2 320 aaPredicted RBP20.69■□□□□ 0.9
HERPUD2-202ENST00000396081 ZFYP08048 801 aaPredicted RBP20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 CCT6AP40227 531 aaKnown RBP20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 TAF7LQ5H9L4 462 aa20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 AEBP2Q6ZN18 517 aaPredicted RBP20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 TTLL7Q6ZT98 887 aa20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 LRP10Q7Z4F1 713 aa20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 SMYD4Q8IYR2 804 aaPredicted RBP20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 RAB21Q9UL25 225 aa20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 FAM237AA0A1B0GTK4 181 aa20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 MORC3Q14149 939 aa20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 NCAPH2Q6IBW4 605 aa20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 IQUBQ8NA54 791 aa20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 MSANTD4Q8NCY6 345 aa20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 NAPGQ99747 312 aaPredicted RBP20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 LMO7Q8WWI1 1683 aa20.68■□□□□ 0.9
HERPUD2-202ENST00000396081 RANBP6O60518 1105 aaKnown RBP20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 SSRP1Q08945 709 aaKnown RBP20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 TMEM67Q5HYA8 995 aa20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 NOSTRINQ8IVI9 506 aa20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 DIS3L2Q8IYB7 885 aaKnown RBP20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 GBP3Q9H0R5 595 aa20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 MARF1Q9Y4F3 1742 aaKnown RBP20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 A0A1B0GTH6 734 aa20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 H7C1W4 665 aa20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 LRRIQ3A6PVS8 624 aaPredicted RBP20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 SH2B2O14492 632 aaPredicted RBP20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 USP5P45974 858 aa20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 PLCD1P51178 756 aa20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 FILIP1LQ4L180 1135 aa20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 ACBD3Q9H3P7 528 aa20.67■□□□□ 0.9
HERPUD2-202ENST00000396081 UBN2Q6ZU65 1347 aa20.66■□□□□ 0.9
HERPUD2-202ENST00000396081 PLEKHG2Q9H7P9 1386 aa20.66■□□□□ 0.9
HERPUD2-202ENST00000396081 CCDC57Q2TAC2 916 aa20.66■□□□□ 0.9
HERPUD2-202ENST00000396081 CMTR1Q8N1G2 835 aaKnown RBP20.66■□□□□ 0.9
HERPUD2-202ENST00000396081 IDH1O75874 414 aaKnown RBP20.66■□□□□ 0.9
HERPUD2-202ENST00000396081 GUCY1A2P33402 732 aa20.66■□□□□ 0.9
HERPUD2-202ENST00000396081 PACS2Q86VP3 889 aa20.66■□□□□ 0.9
HERPUD2-202ENST00000396081 FAM71BQ8TC56 605 aa20.66■□□□□ 0.9
HERPUD2-202ENST00000396081 PCDHB6Q9Y5E3 794 aa20.66■□□□□ 0.9
HERPUD2-202ENST00000396081 CPDO75976 1380 aa20.65■□□□□ 0.9
HERPUD2-202ENST00000396081 MAGEA9P43362 315 aa20.65■□□□□ 0.9
HERPUD2-202ENST00000396081 LRRC31Q6UY01 552 aa20.65■□□□□ 0.9
HERPUD2-202ENST00000396081 SLF1Q9BQI6 1058 aa20.65■□□□□ 0.9
HERPUD2-202ENST00000396081 MFAP3LO75121 409 aa20.65■□□□□ 0.9
HERPUD2-202ENST00000396081 CDC25AP30304 524 aa20.65■□□□□ 0.9
HERPUD2-202ENST00000396081 FXR1P51114 621 aaKnown RBP eCLIP20.65■□□□□ 0.9
HERPUD2-202ENST00000396081 NR5A1Q13285 461 aa20.65■□□□□ 0.9
HERPUD2-202ENST00000396081 SLC12A7Q9Y666 1083 aa20.65■□□□□ 0.9
HERPUD2-202ENST00000396081 CSB-PGBD3P0DP91 1061 aa20.64■□□□□ 0.9
HERPUD2-202ENST00000396081 TOB1P50616 345 aaPredicted RBP20.64■□□□□ 0.9
HERPUD2-202ENST00000396081 RRP12Q5JTH9 1297 aaKnown RBP20.64■□□□□ 0.9
HERPUD2-202ENST00000396081 ICE2Q659A1 982 aa20.64■□□□□ 0.9
HERPUD2-202ENST00000396081 THEMISQ8N1K5 641 aaPredicted RBP20.64■□□□□ 0.9
HERPUD2-202ENST00000396081 NBPF3Q9H094 633 aa20.64■□□□□ 0.9
HERPUD2-202ENST00000396081 IFIT3O14879 490 aaKnown RBP20.64■□□□□ 0.89
HERPUD2-202ENST00000396081 TATP17735 454 aaPredicted RBP20.64■□□□□ 0.89
HERPUD2-202ENST00000396081 PIP4K2BP78356 416 aa20.64■□□□□ 0.89
HERPUD2-202ENST00000396081 STAMQ92783 540 aa20.64■□□□□ 0.89
HERPUD2-202ENST00000396081 NAA15Q9BXJ9 866 aaKnown RBP20.64■□□□□ 0.89
HERPUD2-202ENST00000396081 FBXO2Q9UK22 296 aaPredicted RBP20.64■□□□□ 0.89
HERPUD2-202ENST00000396081 SYNRGQ9UMZ2 1314 aa20.64■□□□□ 0.89
HERPUD2-202ENST00000396081 RNF40O75150 1001 aa20.64■□□□□ 0.89
HERPUD2-202ENST00000396081 PHKG2P15735 406 aa20.64■□□□□ 0.89
HERPUD2-202ENST00000396081 PTPREP23469 700 aa20.64■□□□□ 0.89
HERPUD2-202ENST00000396081 RASGRP2Q7LDG7 609 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms