RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 AHCYL1O43865 530 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 BRD1O95696 1058 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 FESP07332 822 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 KCNQ4P56696 695 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 PRPF4BQ13523 1007 aaKnown RBP10.12□□□□□ -0.79
MSH5-205ENST00000395853 SNW1Q13573 536 aaKnown RBP10.12□□□□□ -0.79
MSH5-205ENST00000395853 SLC30A9Q6PML9 568 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 ARHGAP22Q7Z5H3 698 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 GPR161Q8N6U8 529 aaKnown RBP10.12□□□□□ -0.79
MSH5-205ENST00000395853 IL17REQ8NFR9 667 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 SMCR8Q8TEV9 937 aaPredicted RBP10.12□□□□□ -0.79
MSH5-205ENST00000395853 LNPKQ9C0E8 428 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 KCND1Q9NSA2 647 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 FAN1Q9Y2M0 1017 aa10.12□□□□□ -0.79
MSH5-205ENST00000395853 GNAT3A8MTJ3 354 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 OPA1O60313 960 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 TADA3O75528 432 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 TUBB4AP04350 444 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 SLC4A2P04920 1241 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 GBP2P32456 591 aaPredicted RBP10.11□□□□□ -0.79
MSH5-205ENST00000395853 MAP3K9P80192 1104 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 NUCB1Q02818 461 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 FOXD4Q12950 439 aaPredicted RBP10.11□□□□□ -0.79
MSH5-205ENST00000395853 CEP85LQ5SZL2 805 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 TLDC1Q6P9B6 456 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 MICALCLQ6ZW33 695 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 SDCCAG8Q86SQ7 713 aaPredicted RBP10.11□□□□□ -0.79
MSH5-205ENST00000395853 USP48Q86UV5 1035 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 FAM200AQ8TCP9 573 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 TRIM5Q9C035 493 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 PHACTR1Q9C0D0 580 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 ATP6V0A4Q9HBG4 840 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 PDE11AQ9HCR9 933 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 CCDC192P0DO97 292 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 PDE6BP35913 854 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 DEUP1Q05D60 604 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 TSNAXIP1Q2TAA8 658 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 BMP2KLQ5H9B9 411 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 G2E3Q7L622 706 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 ARMC9Q7Z3E5 817 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 ELOA2Q8IYF1 753 aaPredicted RBP10.11□□□□□ -0.79
MSH5-205ENST00000395853 NBPF15Q8N660 670 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 MIPOL1Q8TD10 442 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 SPATA7Q9P0W8 599 aa10.11□□□□□ -0.79
MSH5-205ENST00000395853 PCDH11XQ9BZA7 1347 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 PCDH11YQ9BZA8 1340 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 SMARCA5O60264 1052 aaPredicted RBP10.1□□□□□ -0.79
MSH5-205ENST00000395853 ST18O60284 1047 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 ATP6V1G1O75348 118 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 IBSPP21815 317 aaPredicted RBP10.1□□□□□ -0.79
MSH5-205ENST00000395853 APLP1P51693 650 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 ZNF75DP51815 510 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 LONRF2Q1L5Z9 754 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 LRRC23Q53EV4 343 aaPredicted RBP10.1□□□□□ -0.79
MSH5-205ENST00000395853 PLA2G4DQ86XP0 818 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 CEP57Q86XR8 500 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 RAPGEF4Q8WZA2 1011 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 XAGE2Q96GT9 111 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 TRIM4Q9C037 500 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 C4BP0C0L5 1744 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 MYO1FO00160 1098 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 ZEB2O60315 1214 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 MCM2P49736 904 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 MPP3Q13368 585 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 INTS3Q68E01 1043 aaKnown RBP10.1□□□□□ -0.79
MSH5-205ENST00000395853 CWF19L1Q69YN2 538 aaKnown RBP10.1□□□□□ -0.79
MSH5-205ENST00000395853 CAPRIN2Q6IMN6 1127 aaKnown RBP10.1□□□□□ -0.79
MSH5-205ENST00000395853 GIMAP6Q6P9H5 292 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 TEKT1Q969V4 418 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 RSRC1Q96IZ7 334 aaKnown RBP10.1□□□□□ -0.79
MSH5-205ENST00000395853 OSBPL9Q96SU4 736 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 GDPD2Q9HCC8 539 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 DDX20Q9UHI6 824 aaKnown RBP10.1□□□□□ -0.79
MSH5-205ENST00000395853 PALLDQ8WX93 1383 aa10.1□□□□□ -0.79
MSH5-205ENST00000395853 CAVIN2O95810 425 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 TATP17735 454 aaPredicted RBP10.09□□□□□ -0.79
MSH5-205ENST00000395853 CYP11B2P19099 503 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 VCAM1P19320 739 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 SKIDA1Q1XH10 827 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 PUS10Q3MIT2 529 aaKnown RBP10.09□□□□□ -0.79
MSH5-205ENST00000395853 RBM26Q5T8P6 1007 aaKnown RBP10.09□□□□□ -0.79
MSH5-205ENST00000395853 MSL1Q68DK7 614 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 TTLL7Q6ZT98 887 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 CHD1LQ86WJ1 897 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 RTEL1Q9NZ71 1219 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 FNTAP49354 379 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 EVCP57679 992 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 GORABQ5T7V8 394 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 IQCF2Q8IXL9 164 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 CLIC6Q96NY7 704 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 PARD6BQ9BYG5 372 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 KLC4Q9NSK0 619 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 PCDHGC5Q9Y5F6 944 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 UBR3Q6ZT12 1888 aa10.09□□□□□ -0.79
MSH5-205ENST00000395853 CCDC151A5D8V7 595 aa10.08□□□□□ -0.8
MSH5-205ENST00000395853 GOLGA6L19H0YKK7 550 aa10.08□□□□□ -0.8
MSH5-205ENST00000395853 FSBPO95073 299 aa10.08□□□□□ -0.8
MSH5-205ENST00000395853 NBPF7P0C2Y1 421 aaPredicted RBP10.08□□□□□ -0.8
MSH5-205ENST00000395853 PAPOLAP51003 745 aaKnown RBP10.08□□□□□ -0.8
MSH5-205ENST00000395853 ROR2Q01974 943 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms