RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 COL25A1Q9BXS0 654 aaPredicted RBP16.8■□□□□ 0.28
CHCHD2-201ENST00000395422 ASCC2Q9H1I8 757 aaPredicted RBP16.8■□□□□ 0.28
CHCHD2-201ENST00000395422 CEP126Q9P2H0 1117 aa16.8■□□□□ 0.28
CHCHD2-201ENST00000395422 PTPRFP10586 1907 aa16.8■□□□□ 0.28
CHCHD2-201ENST00000395422 ZBTB22O15209 634 aa16.79■□□□□ 0.28
CHCHD2-201ENST00000395422 GCLCP48506 637 aaPredicted RBP16.79■□□□□ 0.28
CHCHD2-201ENST00000395422 HMGCS2P54868 508 aa16.79■□□□□ 0.28
CHCHD2-201ENST00000395422 MAP3K21Q5TCX8 1036 aa16.79■□□□□ 0.28
CHCHD2-201ENST00000395422 ZNF280CQ8ND82 737 aa16.79■□□□□ 0.28
CHCHD2-201ENST00000395422 SSH1Q8WYL5 1049 aa16.79■□□□□ 0.28
CHCHD2-201ENST00000395422 UBE2OQ9C0C9 1292 aaKnown RBP16.79■□□□□ 0.28
CHCHD2-201ENST00000395422 ABCF2Q9UG63 623 aa16.79■□□□□ 0.28
CHCHD2-201ENST00000395422 PA2G4Q9UQ80 394 aaKnown RBP16.79■□□□□ 0.28
CHCHD2-201ENST00000395422 DOCK3Q8IZD9 2030 aa16.79■□□□□ 0.28
CHCHD2-201ENST00000395422 SPTBN5Q9NRC6 3674 aaKnown RBP16.78■□□□□ 0.28
CHCHD2-201ENST00000395422 DOCK1Q14185 1865 aa16.78■□□□□ 0.28
CHCHD2-201ENST00000395422 MROH7-TTC4A0A0A0MT08 1334 aa16.78■□□□□ 0.28
CHCHD2-201ENST00000395422 ZGPATQ8N5A5 531 aaKnown RBP16.78■□□□□ 0.28
CHCHD2-201ENST00000395422 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.78■□□□□ 0.28
CHCHD2-201ENST00000395422 FBXO3Q9UK99 471 aa16.78■□□□□ 0.28
CHCHD2-201ENST00000395422 LAMA2P24043 3122 aaKnown RBP16.78■□□□□ 0.28
CHCHD2-201ENST00000395422 EYSQ5T1H1 3165 aa16.77■□□□□ 0.28
CHCHD2-201ENST00000395422 ZNF521Q96K83 1311 aa16.77■□□□□ 0.28
CHCHD2-201ENST00000395422 MYH13Q9UKX3 1938 aa16.77■□□□□ 0.28
CHCHD2-201ENST00000395422 GPR75-ASB3A0A0A6YYF3 556 aa16.77■□□□□ 0.28
CHCHD2-201ENST00000395422 COL6A1P12109 1028 aa16.77■□□□□ 0.28
CHCHD2-201ENST00000395422 PRKAR2AP13861 404 aaKnown RBP16.77■□□□□ 0.28
CHCHD2-201ENST00000395422 CYP2B6P20813 491 aa16.77■□□□□ 0.28
CHCHD2-201ENST00000395422 MECOMQ03112 1051 aa16.77■□□□□ 0.28
CHCHD2-201ENST00000395422 OSBPL5Q9H0X9 879 aaPredicted RBP16.77■□□□□ 0.28
CHCHD2-201ENST00000395422 MORF4L1Q9UBU8 362 aa16.77■□□□□ 0.28
CHCHD2-201ENST00000395422 DDX60LQ5H9U9 1706 aaKnown RBP16.76■□□□□ 0.27
CHCHD2-201ENST00000395422 IL15P40933 162 aaPredicted RBP16.76■□□□□ 0.27
CHCHD2-201ENST00000395422 SH3D19Q5HYK7 790 aa16.76■□□□□ 0.27
CHCHD2-201ENST00000395422 TXNRD2Q9NNW7 524 aa16.76■□□□□ 0.27
CHCHD2-201ENST00000395422 PDS5AQ29RF7 1337 aaKnown RBP16.75■□□□□ 0.27
CHCHD2-201ENST00000395422 NPM3O75607 178 aaKnown RBP16.75■□□□□ 0.27
CHCHD2-201ENST00000395422 CAP2P40123 477 aa16.75■□□□□ 0.27
CHCHD2-201ENST00000395422 TIMM10P62072 90 aa16.75■□□□□ 0.27
CHCHD2-201ENST00000395422 MDM2Q00987 491 aaPredicted RBP16.75■□□□□ 0.27
CHCHD2-201ENST00000395422 LRRC26Q2I0M4 334 aa16.75■□□□□ 0.27
CHCHD2-201ENST00000395422 SLF2Q8IX21 1173 aa16.75■□□□□ 0.27
CHCHD2-201ENST00000395422 GUCD1Q96NT3 240 aa16.75■□□□□ 0.27
CHCHD2-201ENST00000395422 LOC285556D6RIA3 1793 aa16.74■□□□□ 0.27
CHCHD2-201ENST00000395422 USP17L5A8MUK1 530 aa16.74■□□□□ 0.27
CHCHD2-201ENST00000395422 JAG1P78504 1218 aa16.74■□□□□ 0.27
CHCHD2-201ENST00000395422 CACNB2Q08289 660 aaPredicted RBP16.74■□□□□ 0.27
CHCHD2-201ENST00000395422 PABPC4Q13310 644 aaKnown RBP eCLIP16.74■□□□□ 0.272e-19■■■□□ 18.8
CHCHD2-201ENST00000395422 LHX8Q68G74 356 aa16.74■□□□□ 0.27
CHCHD2-201ENST00000395422 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.74■□□□□ 0.278e-8■□□□□ 10.3
CHCHD2-201ENST00000395422 P2RX7Q99572 595 aaKnown RBP16.74■□□□□ 0.27
CHCHD2-201ENST00000395422 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.74■□□□□ 0.27
CHCHD2-201ENST00000395422 PLXNB2O15031 1838 aa16.73■□□□□ 0.27
CHCHD2-201ENST00000395422 MYH2Q9UKX2 1941 aa16.73■□□□□ 0.27
CHCHD2-201ENST00000395422 POTEB2H3BUK9 544 aa16.73■□□□□ 0.27
CHCHD2-201ENST00000395422 UBTFL1P0CB47 393 aaPredicted RBP16.73■□□□□ 0.27
CHCHD2-201ENST00000395422 CCND3P30281 292 aaPredicted RBP16.73■□□□□ 0.27
CHCHD2-201ENST00000395422 MTMR2Q13614 643 aa16.73■□□□□ 0.27
CHCHD2-201ENST00000395422 CCL14Q16627 93 aa16.73■□□□□ 0.27
CHCHD2-201ENST00000395422 SHROOM1Q2M3G4 852 aaPredicted RBP16.73■□□□□ 0.27
CHCHD2-201ENST00000395422 SPTY2D1Q68D10 685 aaPredicted RBP16.73■□□□□ 0.27
CHCHD2-201ENST00000395422 POTEEQ6S8J3 1075 aa16.73■□□□□ 0.27
CHCHD2-201ENST00000395422 PI16Q6UXB8 463 aa16.73■□□□□ 0.27
CHCHD2-201ENST00000395422 NUDT12Q9BQG2 462 aa16.73■□□□□ 0.27
CHCHD2-201ENST00000395422 CDH23Q9H251 3354 aa16.72■□□□□ 0.27
CHCHD2-201ENST00000395422 XRCC5P13010 732 aaKnown RBP16.72■□□□□ 0.27
CHCHD2-201ENST00000395422 Q3C1V9 767 aa16.72■□□□□ 0.27
CHCHD2-201ENST00000395422 TBC1D9Q6ZT07 1266 aa16.72■□□□□ 0.27
CHCHD2-201ENST00000395422 ERICH6Q7L0X2 663 aa16.72■□□□□ 0.27
CHCHD2-201ENST00000395422 FAM9BQ8IZU0 186 aa16.72■□□□□ 0.27
CHCHD2-201ENST00000395422 USP6NLQ92738 828 aa16.72■□□□□ 0.27
CHCHD2-201ENST00000395422 NSUN4Q96CB9 384 aaKnown RBP16.72■□□□□ 0.27
CHCHD2-201ENST00000395422 XAGE2Q96GT9 111 aa16.72■□□□□ 0.27
CHCHD2-201ENST00000395422 TBC1D2Q9BYX2 928 aa16.72■□□□□ 0.27
CHCHD2-201ENST00000395422 COPRSQ9NQ92 184 aa16.72■□□□□ 0.27
CHCHD2-201ENST00000395422 COL2A1P02458 1487 aaPredicted RBP16.72■□□□□ 0.27
CHCHD2-201ENST00000395422 A0A1B0GUL7 405 aa16.71■□□□□ 0.27
CHCHD2-201ENST00000395422 HOXA7P31268 230 aaPredicted RBP16.71■□□□□ 0.27
CHCHD2-201ENST00000395422 BACE1P56817 501 aa16.71■□□□□ 0.27
CHCHD2-201ENST00000395422 HERVK_113P62684 666 aa16.71■□□□□ 0.27
CHCHD2-201ENST00000395422 IRX3P78415 501 aaPredicted RBP16.71■□□□□ 0.27
CHCHD2-201ENST00000395422 GPRC5AQ8NFJ5 357 aa16.71■□□□□ 0.27
CHCHD2-201ENST00000395422 SOCS4Q8WXH5 440 aa16.71■□□□□ 0.27
CHCHD2-201ENST00000395422 FAM161BQ96MY7 647 aa16.71■□□□□ 0.27
CHCHD2-201ENST00000395422 WDR18Q9BV38 432 aa16.71■□□□□ 0.27
CHCHD2-201ENST00000395422 PORCNQ9H237 461 aa16.71■□□□□ 0.27
CHCHD2-201ENST00000395422 HMG20BQ9P0W2 317 aa16.71■□□□□ 0.27
CHCHD2-201ENST00000395422 RBPJLQ9UBG7 517 aa16.71■□□□□ 0.27
CHCHD2-201ENST00000395422 ZKSCAN1P17029 563 aaPredicted RBP16.7■□□□□ 0.26
CHCHD2-201ENST00000395422 DNAJC18Q9H819 358 aa16.7■□□□□ 0.26
CHCHD2-201ENST00000395422 AS3MTQ9HBK9 375 aa16.7■□□□□ 0.26
CHCHD2-201ENST00000395422 TFCP2Q12800 502 aa16.69■□□□□ 0.26
CHCHD2-201ENST00000395422 MORN1Q5T089 497 aa16.69■□□□□ 0.26
CHCHD2-201ENST00000395422 FAM109BQ6ICB4 259 aaPredicted RBP16.69■□□□□ 0.26
CHCHD2-201ENST00000395422 GPR142Q7Z601 462 aa16.69■□□□□ 0.26
CHCHD2-201ENST00000395422 SH3RF3Q8TEJ3 882 aaPredicted RBP16.69■□□□□ 0.26
CHCHD2-201ENST00000395422 HERC5Q9UII4 1024 aaKnown RBP16.69■□□□□ 0.26
CHCHD2-201ENST00000395422 DNAH12Q6ZR08 3092 aa16.69■□□□□ 0.26
CHCHD2-201ENST00000395422 MAPK4P31152 587 aa16.68■□□□□ 0.26
CHCHD2-201ENST00000395422 ERVK-9P63128 1117 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms