RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 FAM237AA0A1B0GTK4 181 aa16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 GSG1L2A8MUP6 293 aa16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 MMP1P03956 469 aa16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 RTN1Q16799 776 aa16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 INTS13Q9NVM9 706 aa16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 MAN1B1Q9UKM7 699 aa16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 IQSEC3Q9UPP2 1182 aaPredicted RBP16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 SLC4A4Q9Y6R1 1079 aa16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 SLC5A1P13866 664 aa16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 PCDHB6Q9Y5E3 794 aa16.01■□□□□ 0.15
GAPVD1-205ENST00000394084 URI1O94763 535 aaPredicted RBP16■□□□□ 0.15
GAPVD1-205ENST00000394084 IFNAR1P17181 557 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 CDK11BP21127 795 aaKnown RBP16■□□□□ 0.15
GAPVD1-205ENST00000394084 FGFR2P21802 821 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 FMR1Q06787 632 aaKnown RBP eCLIP16■□□□□ 0.153e-11■■□□□ 12.1
GAPVD1-205ENST00000394084 WTAPQ15007 396 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 TRIM22Q8IYM9 498 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 KRT222Q8N1A0 295 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 ZNF446Q9NWS9 450 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 ECM29Q5VYK3 1845 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 KCNJ6P48051 423 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 BCAMP50895 628 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 POSTNQ15063 836 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 ALX1Q15699 326 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 CCDC93Q567U6 631 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 OXER1Q8TDS5 423 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 MPHOSPH8Q99549 860 aa16■□□□□ 0.15
GAPVD1-205ENST00000394084 FANCGO15287 622 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 DHX8Q14562 1220 aaKnown RBP15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 ARHGAP29Q52LW3 1261 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 USP49Q70CQ1 688 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 ST7Q9NRC1 585 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 FBXO2Q9UK22 296 aaPredicted RBP15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 WASF1Q92558 559 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 KRT23Q9C075 422 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 SLAIN2Q9P270 581 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 NFE2L3Q9Y4A8 694 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 SOS2Q07890 1332 aaPredicted RBP15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 STK36Q9NRP7 1315 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 SMIM22K7EJ46 135 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 ADKP55263 362 aaKnown RBP15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 MDM2Q00987 491 aaPredicted RBP15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 TRIM65Q6PJ69 517 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 REXO1L1PQ8IX06 675 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 CNNM2Q9H8M5 875 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 MROH5Q6ZUA9 1318 aa15.99■□□□□ 0.15
GAPVD1-205ENST00000394084 ERICH2A1L162 156 aa15.98■□□□□ 0.15
GAPVD1-205ENST00000394084 CABP5Q9NP86 173 aa15.98■□□□□ 0.15
GAPVD1-205ENST00000394084 hCG_1642624A0A1W2PR95 340 aa15.98■□□□□ 0.15
GAPVD1-205ENST00000394084 MINDY4BA8MYZ0 360 aa15.98■□□□□ 0.15
GAPVD1-205ENST00000394084 SART3Q15020 963 aaKnown RBP15.98■□□□□ 0.15
GAPVD1-205ENST00000394084 RGS22Q8NE09 1264 aa15.98■□□□□ 0.15
GAPVD1-205ENST00000394084 SMARCE1Q969G3 411 aa15.98■□□□□ 0.15
GAPVD1-205ENST00000394084 BTG4Q9NY30 223 aa15.98■□□□□ 0.15
GAPVD1-205ENST00000394084 FAM205CA6NFA0 338 aa15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 CCP110O43303 1012 aa15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 PTPREP23469 700 aa15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 NACAP1Q9BZK3 213 aa15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 LRP2BPQ9P2M1 347 aa15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 HOOK1Q9UJC3 728 aaKnown RBP15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 SUSD4Q5VX71 490 aa15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 MNS1Q8NEH6 495 aa15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 CARD6Q9BX69 1037 aa15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 PPP2R2CQ9Y2T4 447 aa15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 CLCN6P51797 869 aa15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 TMEM139Q8IV31 216 aa15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 CRACR2BQ8N4Y2 399 aaPredicted RBP15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 SDR42E1Q8WUS8 393 aa15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 SAMSN1Q9NSI8 373 aaKnown RBP15.97■□□□□ 0.15
GAPVD1-205ENST00000394084 PHLPP2Q6ZVD8 1323 aa15.96■□□□□ 0.15
GAPVD1-205ENST00000394084 GABPB1Q06547 395 aaPredicted RBP15.96■□□□□ 0.15
GAPVD1-205ENST00000394084 RILPL1Q5EBL4 403 aa15.96■□□□□ 0.15
GAPVD1-205ENST00000394084 ZNF654Q8IZM8 581 aa15.96■□□□□ 0.15
GAPVD1-205ENST00000394084 UBXN4Q92575 508 aa15.96■□□□□ 0.15
GAPVD1-205ENST00000394084 BAG1Q99933 345 aaPredicted RBP15.96■□□□□ 0.15
GAPVD1-205ENST00000394084 CSRNP2Q9H175 543 aa15.96■□□□□ 0.15
GAPVD1-205ENST00000394084 MYH3P11055 1940 aa15.96■□□□□ 0.15
GAPVD1-205ENST00000394084 DEXIO95424 95 aa15.96■□□□□ 0.15
GAPVD1-205ENST00000394084 H2AFXP16104 143 aaPredicted RBP15.96■□□□□ 0.15
GAPVD1-205ENST00000394084 VWA3AA6NCI4 1184 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 KIF20AO95235 890 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 SLFN14P0C7P3 912 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 CASP1P29466 404 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 TOGARAM2Q6ZUX3 1019 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 ZNF34Q8IZ26 560 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 FANCBQ8NB91 859 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 STAG1Q8WVM7 1258 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 UBAC1Q9BSL1 405 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 DESI2Q9BSY9 194 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 EPC1Q9H2F5 836 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 FOXP1Q9H334 677 aaPredicted RBP15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 ABCF2Q9UG63 623 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 ARHGAP6O43182 974 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 ZSCAN12O43309 604 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 AFMP43652 599 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 KLHL10Q6JEL2 608 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 DHX58Q96C10 678 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 MED15Q96RN5 788 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 VPS54Q9P1Q0 977 aa15.95■□□□□ 0.14
GAPVD1-205ENST00000394084 PRDM1O75626 825 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms