RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 POLR3DP05423 398 aaPredicted RBP22.84■■□□□ 1.25
PDLIM7-204ENST00000393546 CRACR2BQ8N4Y2 399 aaPredicted RBP22.84■■□□□ 1.25
PDLIM7-204ENST00000393546 OPTNQ96CV9 577 aa22.84■■□□□ 1.25
PDLIM7-204ENST00000393546 DDRGK1Q96HY6 314 aa22.84■■□□□ 1.25
PDLIM7-204ENST00000393546 STRBPQ96SI9 672 aaKnown RBP22.84■■□□□ 1.25
PDLIM7-204ENST00000393546 MCM9Q9NXL9 1143 aa22.84■■□□□ 1.25
PDLIM7-204ENST00000393546 SNCAIPQ9Y6H5 919 aa22.84■■□□□ 1.25
PDLIM7-204ENST00000393546 SLC4A4Q9Y6R1 1079 aa22.84■■□□□ 1.25
PDLIM7-204ENST00000393546 MYH1P12882 1939 aa22.84■■□□□ 1.25
PDLIM7-204ENST00000393546 CTNND1O60716 968 aaKnown RBP22.83■■□□□ 1.25
PDLIM7-204ENST00000393546 SLURP2P0DP57 97 aa22.83■■□□□ 1.25
PDLIM7-204ENST00000393546 ZMYM1Q5SVZ6 1142 aa22.83■■□□□ 1.25
PDLIM7-204ENST00000393546 NOL9Q5SY16 702 aaKnown RBP22.83■■□□□ 1.25
PDLIM7-204ENST00000393546 ERO1BQ86YB8 467 aa22.83■■□□□ 1.25
PDLIM7-204ENST00000393546 DCP1AQ9NPI6 582 aaPredicted RBP22.83■■□□□ 1.25
PDLIM7-204ENST00000393546 OTOFQ9HC10 1997 aa22.83■■□□□ 1.24
PDLIM7-204ENST00000393546 FAM196BA6NMK8 535 aa22.82■■□□□ 1.24
PDLIM7-204ENST00000393546 HSPA1AP0DMV8 641 aaKnown RBP22.82■■□□□ 1.24
PDLIM7-204ENST00000393546 HSPA1BP0DMV9 641 aaKnown RBP22.82■■□□□ 1.24
PDLIM7-204ENST00000393546 SLC4A8Q2Y0W8 1093 aa22.82■■□□□ 1.24
PDLIM7-204ENST00000393546 METTL16Q86W50 562 aaKnown RBP22.82■■□□□ 1.24
PDLIM7-204ENST00000393546 THSD7BQ9C0I4 1608 aa22.82■■□□□ 1.24
PDLIM7-204ENST00000393546 MANSC4A6NHS7 340 aaPredicted RBP22.81■■□□□ 1.24
PDLIM7-204ENST00000393546 SPDYE5A6NIY4 337 aa22.81■■□□□ 1.24
PDLIM7-204ENST00000393546 GPAA1O43292 621 aa22.81■■□□□ 1.24
PDLIM7-204ENST00000393546 GNAT2P19087 354 aa22.81■■□□□ 1.24
PDLIM7-204ENST00000393546 INHBEP58166 350 aa22.81■■□□□ 1.24
PDLIM7-204ENST00000393546 OTUD5Q96G74 571 aa22.81■■□□□ 1.24
PDLIM7-204ENST00000393546 PICK1Q9NRD5 415 aa22.81■■□□□ 1.24
PDLIM7-204ENST00000393546 M0R2C6 588 aa22.8■■□□□ 1.24
PDLIM7-204ENST00000393546 GJA5P36382 358 aa22.8■■□□□ 1.24
PDLIM7-204ENST00000393546 PPATQ06203 517 aa22.8■■□□□ 1.24
PDLIM7-204ENST00000393546 SREBF2Q12772 1141 aa22.8■■□□□ 1.24
PDLIM7-204ENST00000393546 ERICH6BQ5W0A0 696 aa22.8■■□□□ 1.24
PDLIM7-204ENST00000393546 AMOTL1Q8IY63 956 aa22.8■■□□□ 1.24
PDLIM7-204ENST00000393546 SCYL3Q8IZE3 742 aa22.8■■□□□ 1.24
PDLIM7-204ENST00000393546 CNKSR2Q8WXI2 1034 aa22.8■■□□□ 1.24
PDLIM7-204ENST00000393546 SEC62Q99442 399 aaKnown RBP22.8■■□□□ 1.24
PDLIM7-204ENST00000393546 EHD4Q9H223 541 aa22.8■■□□□ 1.24
PDLIM7-204ENST00000393546 TM4SF4P48230 202 aa22.79■■□□□ 1.24
PDLIM7-204ENST00000393546 PLCD1P51178 756 aa22.79■■□□□ 1.24
PDLIM7-204ENST00000393546 HELLSQ9NRZ9 838 aa22.79■■□□□ 1.24
PDLIM7-204ENST00000393546 SERPINB13Q9UIV8 391 aa22.79■■□□□ 1.24
PDLIM7-204ENST00000393546 CAP2P40123 477 aa22.78■■□□□ 1.24
PDLIM7-204ENST00000393546 PPIL2Q13356 520 aa22.78■■□□□ 1.24
PDLIM7-204ENST00000393546 TTC22Q5TAA0 569 aa22.78■■□□□ 1.24
PDLIM7-204ENST00000393546 GIMAP6Q6P9H5 292 aa22.78■■□□□ 1.24
PDLIM7-204ENST00000393546 PCNTO95613 3336 aa22.77■■□□□ 1.24
PDLIM7-204ENST00000393546 NAV1Q8NEY1 1877 aa22.77■■□□□ 1.24
PDLIM7-204ENST00000393546 GSG1L2A8MUP6 293 aa22.77■■□□□ 1.24
PDLIM7-204ENST00000393546 PATL2C9JE40 543 aaKnown RBP22.77■■□□□ 1.24
PDLIM7-204ENST00000393546 CA12O43570 354 aa22.77■■□□□ 1.24
PDLIM7-204ENST00000393546 APPP05067 770 aa22.77■■□□□ 1.24
PDLIM7-204ENST00000393546 GTF2A2P52657 109 aa22.77■■□□□ 1.24
PDLIM7-204ENST00000393546 DNAJC18Q9H819 358 aa22.77■■□□□ 1.24
PDLIM7-204ENST00000393546 SIPA1L1O43166 1804 aa22.76■■□□□ 1.23
PDLIM7-204ENST00000393546 USP17L12C9JPN9 530 aa22.76■■□□□ 1.23
PDLIM7-204ENST00000393546 USP17L21D6R901 530 aa22.76■■□□□ 1.23
PDLIM7-204ENST00000393546 PTPRAP18433 802 aa22.76■■□□□ 1.23
PDLIM7-204ENST00000393546 SDSP20132 328 aa22.76■■□□□ 1.23
PDLIM7-204ENST00000393546 HIP1O00291 1037 aa22.75■■□□□ 1.23
PDLIM7-204ENST00000393546 IRF6O14896 467 aa22.75■■□□□ 1.23
PDLIM7-204ENST00000393546 CYP2D6P10635 497 aa22.75■■□□□ 1.23
PDLIM7-204ENST00000393546 SNAPC2Q13487 334 aa22.75■■□□□ 1.23
PDLIM7-204ENST00000393546 RRP1BQ14684 758 aaKnown RBP22.75■■□□□ 1.23
PDLIM7-204ENST00000393546 MCMDC2Q4G0Z9 681 aa22.75■■□□□ 1.23
PDLIM7-204ENST00000393546 C12orf60Q5U649 245 aa22.75■■□□□ 1.23
PDLIM7-204ENST00000393546 TATDN1Q6P1N9 297 aa22.75■■□□□ 1.23
PDLIM7-204ENST00000393546 NACAP1Q9BZK3 213 aa22.75■■□□□ 1.23
PDLIM7-204ENST00000393546 GINM1Q9NU53 330 aa22.75■■□□□ 1.23
PDLIM7-204ENST00000393546 TAOK2Q9UL54 1235 aa22.75■■□□□ 1.23
PDLIM7-204ENST00000393546 ZHX2Q9Y6X8 837 aa22.75■■□□□ 1.23
PDLIM7-204ENST00000393546 TESPA1A2RU30 521 aaPredicted RBP22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 FOXN1O15353 648 aa22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 CTCFP49711 727 aaPredicted RBP22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 GABPAQ06546 454 aa22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 NMIQ13287 307 aaPredicted RBP22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 OTUD7BQ6GQQ9 843 aa22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 CTR9Q6PD62 1173 aa22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 MS4A4AQ96JQ5 239 aa22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 FAM227BQ96M60 508 aa22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 DIAPH3Q9NSV4 1193 aa22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 RNF186Q9NXI6 227 aa22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 PPP4R2Q9NY27 417 aa22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 ARPP21Q9UBL0 812 aaPredicted RBP22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 BAZ2AQ9UIF9 1905 aaKnown RBP22.74■■□□□ 1.23
PDLIM7-204ENST00000393546 CXCL11O14625 94 aa22.73■■□□□ 1.23
PDLIM7-204ENST00000393546 TRPA1O75762 1119 aa22.73■■□□□ 1.23
PDLIM7-204ENST00000393546 ASNSP08243 561 aa22.73■■□□□ 1.23
PDLIM7-204ENST00000393546 CETPP11597 493 aa22.73■■□□□ 1.23
PDLIM7-204ENST00000393546 GSPT1P15170 499 aaKnown RBP22.73■■□□□ 1.23
PDLIM7-204ENST00000393546 TDO2P48775 406 aa22.73■■□□□ 1.23
PDLIM7-204ENST00000393546 CERKLQ49MI3 558 aaPredicted RBP22.73■■□□□ 1.23
PDLIM7-204ENST00000393546 SBK1Q52WX2 424 aa22.73■■□□□ 1.23
PDLIM7-204ENST00000393546 CCDC129Q6ZRS4 1044 aa22.73■■□□□ 1.23
PDLIM7-204ENST00000393546 IFNL3Q8IZI9 196 aa22.73■■□□□ 1.23
PDLIM7-204ENST00000393546 SAGE1Q9NXZ1 904 aa22.73■■□□□ 1.23
PDLIM7-204ENST00000393546 SWAP70Q9UH65 585 aa22.73■■□□□ 1.23
PDLIM7-204ENST00000393546 DDX60LQ5H9U9 1706 aaKnown RBP22.72■■□□□ 1.23
PDLIM7-204ENST00000393546 CYP2D7A0A087X1C5 515 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms