RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 FAM107BQ9H098 131 aa16.56■□□□□ 0.24
SFXN3-202ENST00000393459 ZPR1O75312 459 aa16.56■□□□□ 0.24
SFXN3-202ENST00000393459 SLC4A8Q2Y0W8 1093 aa16.56■□□□□ 0.24
SFXN3-202ENST00000393459 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
SFXN3-202ENST00000393459 HDXQ7Z353 690 aa16.56■□□□□ 0.24
SFXN3-202ENST00000393459 SRGAP1Q7Z6B7 1085 aa16.56■□□□□ 0.24
SFXN3-202ENST00000393459 MTMR7Q9Y216 660 aa16.56■□□□□ 0.24
SFXN3-202ENST00000393459 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
SFXN3-202ENST00000393459 RNF113AO15541 343 aaKnown RBP16.55■□□□□ 0.24
SFXN3-202ENST00000393459 YEATS4O95619 227 aa16.55■□□□□ 0.24
SFXN3-202ENST00000393459 NOP2P46087 812 aaKnown RBP16.55■□□□□ 0.24
SFXN3-202ENST00000393459 HSPA2P54652 639 aa16.55■□□□□ 0.24
SFXN3-202ENST00000393459 TTLL7Q6ZT98 887 aa16.55■□□□□ 0.24
SFXN3-202ENST00000393459 AKR1B15C9JRZ8 316 aaPredicted RBP16.55■□□□□ 0.24
SFXN3-202ENST00000393459 CCT5P48643 541 aa16.55■□□□□ 0.24
SFXN3-202ENST00000393459 FXR1P51114 621 aaKnown RBP eCLIP16.55■□□□□ 0.24
SFXN3-202ENST00000393459 FBXW10Q5XX13 1052 aa16.55■□□□□ 0.24
SFXN3-202ENST00000393459 CYB5R4Q7L1T6 521 aa16.55■□□□□ 0.24
SFXN3-202ENST00000393459 TTC5Q8N0Z6 440 aa16.55■□□□□ 0.24
SFXN3-202ENST00000393459 HELBQ8NG08 1087 aaPredicted RBP16.55■□□□□ 0.24
SFXN3-202ENST00000393459 ANKRD24Q8TF21 1146 aa16.55■□□□□ 0.24
SFXN3-202ENST00000393459 EPSTI1Q96J88 318 aa16.55■□□□□ 0.24
SFXN3-202ENST00000393459 MED15Q96RN5 788 aa16.55■□□□□ 0.24
SFXN3-202ENST00000393459 PLIN2Q99541 437 aa16.55■□□□□ 0.24
SFXN3-202ENST00000393459 HOOK1Q9UJC3 728 aaKnown RBP16.55■□□□□ 0.24
SFXN3-202ENST00000393459 PALLDQ8WX93 1383 aa16.55■□□□□ 0.24
SFXN3-202ENST00000393459 RNF225M0QZC1 329 aaPredicted RBP16.54■□□□□ 0.24
SFXN3-202ENST00000393459 RNF40O75150 1001 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 TPM1P09493 284 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 CTDSPL2Q05D32 466 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 POSTNQ15063 836 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 ZNF790Q6PG37 636 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 EXOC4Q96A65 974 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 PCDHB6Q9Y5E3 794 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 SALL1Q9NSC2 1324 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 STRCP1A6NGW2 1772 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 CEMIPQ8WUJ3 1361 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 A0A0G2JS52 829 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 LRRC31Q6UY01 552 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 ZNF274Q96GC6 653 aaPredicted RBP16.54■□□□□ 0.24
SFXN3-202ENST00000393459 TAB2Q9NYJ8 693 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 HDAC5Q9UQL6 1122 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 NCAPD2Q15021 1401 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 CTAGE15A4D2H0 777 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 CTAGE9A4FU28 777 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 CCDC151A5D8V7 595 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 CTAGE8P0CG41 777 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 IARSP41252 1262 aaKnown RBP16.54■□□□□ 0.24
SFXN3-202ENST00000393459 CTAGE6Q86UF2 777 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 CTAGE4Q8IX94 777 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 CAGE1Q8TC20 777 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 TSPYL1Q9H0U9 437 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 CABP5Q9NP86 173 aa16.54■□□□□ 0.24
SFXN3-202ENST00000393459 GOLGA8AA7E2F4 631 aa16.53■□□□□ 0.24
SFXN3-202ENST00000393459 GPAA1O43292 621 aa16.53■□□□□ 0.24
SFXN3-202ENST00000393459 PRDM1O75626 825 aa16.53■□□□□ 0.24
SFXN3-202ENST00000393459 RFX5P48382 616 aaPredicted RBP16.53■□□□□ 0.24
SFXN3-202ENST00000393459 ZMYM1Q5SVZ6 1142 aa16.53■□□□□ 0.24
SFXN3-202ENST00000393459 OXER1Q8TDS5 423 aa16.53■□□□□ 0.24
SFXN3-202ENST00000393459 METTL22Q9BUU2 404 aaPredicted RBP16.53■□□□□ 0.24
SFXN3-202ENST00000393459 SMARCAL1Q9NZC9 954 aa16.53■□□□□ 0.24
SFXN3-202ENST00000393459 ALS2Q96Q42 1657 aa16.53■□□□□ 0.24
SFXN3-202ENST00000393459 IKBKBO14920 756 aa16.53■□□□□ 0.24
SFXN3-202ENST00000393459 ZNF185O15231 689 aa16.53■□□□□ 0.24
SFXN3-202ENST00000393459 ECM2O94769 699 aaPredicted RBP16.53■□□□□ 0.24
SFXN3-202ENST00000393459 ICE2Q659A1 982 aa16.53■□□□□ 0.24
SFXN3-202ENST00000393459 NCOA7Q8NI08 942 aa16.53■□□□□ 0.24
SFXN3-202ENST00000393459 DDX17Q92841 729 aaKnown RBP16.53■□□□□ 0.24
SFXN3-202ENST00000393459 ADGRG1Q9Y653 693 aa16.53■□□□□ 0.24
SFXN3-202ENST00000393459 MNAT1P51948 309 aa16.52■□□□□ 0.24
SFXN3-202ENST00000393459 MUM1L1Q5H9M0 696 aa16.52■□□□□ 0.24
SFXN3-202ENST00000393459 CHP1Q99653 195 aa16.52■□□□□ 0.24
SFXN3-202ENST00000393459 STX10O60499 249 aa16.52■□□□□ 0.23
SFXN3-202ENST00000393459 EIF3JO75822 258 aaKnown RBP16.52■□□□□ 0.23
SFXN3-202ENST00000393459 PPARAQ07869 468 aa16.52■□□□□ 0.23
SFXN3-202ENST00000393459 SMARCC1Q92922 1105 aaPredicted RBP16.52■□□□□ 0.23
SFXN3-202ENST00000393459 ALDH8A1Q9H2A2 487 aaPredicted RBP16.52■□□□□ 0.23
SFXN3-202ENST00000393459 COPRSQ9NQ92 184 aa16.52■□□□□ 0.23
SFXN3-202ENST00000393459 ATG3Q9NT62 314 aa16.52■□□□□ 0.23
SFXN3-202ENST00000393459 IQSEC3Q9UPP2 1182 aaPredicted RBP16.52■□□□□ 0.23
SFXN3-202ENST00000393459 N4BP3O15049 544 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 ERLIN1O75477 346 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 CHRNA2Q15822 529 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 NOM1Q5C9Z4 860 aaKnown RBP16.51■□□□□ 0.23
SFXN3-202ENST00000393459 TBC1D10CQ8IV04 446 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 CABLES1Q8TDN4 633 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 CDC23Q9UJX2 597 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 SMIM22K7EJ46 135 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
SFXN3-202ENST00000393459 PDE6BP35913 854 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 KCTD16Q68DU8 428 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 CTR9Q6PD62 1173 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 DIS3L2Q8IYB7 885 aaKnown RBP16.51■□□□□ 0.23
SFXN3-202ENST00000393459 CENPHQ9H3R5 247 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 CTNND2Q9UQB3 1225 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 MACROD2A1Z1Q3 448 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 TMEM67Q5HYA8 995 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 JMYQ8N9B5 988 aa16.51■□□□□ 0.23
SFXN3-202ENST00000393459 ATP1A2P50993 1020 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms