RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 NAPBQ9H115 298 aa12.81□□□□□ -0.36
PDGFD-202ENST00000393158 PPP1R1BQ9UD71 204 aaPredicted RBP12.81□□□□□ -0.36
PDGFD-202ENST00000393158 CTNNA3Q9UI47 895 aa12.81□□□□□ -0.36
PDGFD-202ENST00000393158 DDTLA6NHG4 134 aaPredicted RBP12.81□□□□□ -0.36
PDGFD-202ENST00000393158 NPM3O75607 178 aaKnown RBP12.81□□□□□ -0.36
PDGFD-202ENST00000393158 MAPKAPK5Q8IW41 473 aa12.81□□□□□ -0.36
PDGFD-202ENST00000393158 PDIA3P30101 505 aaKnown RBP12.8□□□□□ -0.36
PDGFD-202ENST00000393158 GSTO1P78417 241 aa12.8□□□□□ -0.36
PDGFD-202ENST00000393158 C16orf86Q6ZW13 317 aa12.8□□□□□ -0.36
PDGFD-202ENST00000393158 SGMS1Q86VZ5 419 aa12.8□□□□□ -0.36
PDGFD-202ENST00000393158 LIMCH1Q9UPQ0 1083 aa12.8□□□□□ -0.36
PDGFD-202ENST00000393158 IGKV6D-41A0A0C4DH26 115 aa12.8□□□□□ -0.36
PDGFD-202ENST00000393158 NTRK3Q16288 839 aa12.8□□□□□ -0.36
PDGFD-202ENST00000393158 SLC35G1Q2M3R5 365 aa12.8□□□□□ -0.36
PDGFD-202ENST00000393158 NECAB1Q8N987 351 aa12.8□□□□□ -0.36
PDGFD-202ENST00000393158 OSBPL5Q9H0X9 879 aaPredicted RBP12.8□□□□□ -0.36
PDGFD-202ENST00000393158 SPRYD3Q8NCJ5 442 aa12.8□□□□□ -0.36
PDGFD-202ENST00000393158 GTF3C6Q969F1 213 aa12.8□□□□□ -0.36
PDGFD-202ENST00000393158 INTS4Q96HW7 963 aaKnown RBP12.8□□□□□ -0.36
PDGFD-202ENST00000393158 ARPP21Q9UBL0 812 aaPredicted RBP12.8□□□□□ -0.36
PDGFD-202ENST00000393158 FDPSP14324 419 aaKnown RBP12.79□□□□□ -0.36
PDGFD-202ENST00000393158 RASA1P20936 1047 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 APOBRQ0VD83 1088 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 AGBL3Q8NEM8 1001 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 LOC285556D6RIA3 1793 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 UBE2Q2LH0YL09 131 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 ST18O60284 1047 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 SLC4A8Q2Y0W8 1093 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 ENAHQ8N8S7 591 aaPredicted RBP12.79□□□□□ -0.36
PDGFD-202ENST00000393158 SMARCC2Q8TAQ2 1214 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 BRF1Q92994 677 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 TEKT1Q969V4 418 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 CRNKL1Q9BZJ0 848 aaKnown RBP12.79□□□□□ -0.36
PDGFD-202ENST00000393158 BAZ2BQ9UIF8 2168 aaKnown RBP12.79□□□□□ -0.36
PDGFD-202ENST00000393158 PRC1O43663 620 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 PRDM1O75626 825 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 PDIA4P13667 645 aaKnown RBP12.79□□□□□ -0.36
PDGFD-202ENST00000393158 SHMT1P34896 483 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 CFAP100Q494V2 611 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 NCOA7Q8NI08 942 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 TEPSINQ96N21 525 aa12.79□□□□□ -0.36
PDGFD-202ENST00000393158 WNT10BO00744 389 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 PFKFB2O60825 505 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 KDM4AO75164 1064 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 FUT2Q10981 343 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 NBPF9Q3BBW0 867 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 PSMA5P28066 241 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 CDC27P30260 824 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 NOL8Q76FK4 1167 aaKnown RBP12.78□□□□□ -0.36
PDGFD-202ENST00000393158 SIAH1Q8IUQ4 282 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 SAP30BPQ9UHR5 308 aaKnown RBP12.78□□□□□ -0.36
PDGFD-202ENST00000393158 HTTP42858 3142 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 APPP05067 770 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 HMGB1P09429 215 aaKnown RBP12.78□□□□□ -0.36
PDGFD-202ENST00000393158 TDO2P48775 406 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 HIRAP54198 1017 aaPredicted RBP12.78□□□□□ -0.36
PDGFD-202ENST00000393158 MAP3K10Q02779 954 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 SPDYE2Q495Y8 402 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 RASGRP2Q7LDG7 609 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 HSCBQ8IWL3 235 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 TDRD3Q9H7E2 651 aaKnown RBP12.78□□□□□ -0.36
PDGFD-202ENST00000393158 MCM9Q9NXL9 1143 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 MYO3BQ8WXR4 1341 aa12.78□□□□□ -0.36
PDGFD-202ENST00000393158 GUCY1A2P33402 732 aa12.77□□□□□ -0.36
PDGFD-202ENST00000393158 NBPF11Q86T75 865 aa12.77□□□□□ -0.36
PDGFD-202ENST00000393158 TEX11Q8IYF3 940 aa12.77□□□□□ -0.36
PDGFD-202ENST00000393158 CHAMP1Q96JM3 812 aa12.77□□□□□ -0.36
PDGFD-202ENST00000393158 FOXD4L1Q9NU39 408 aa12.77□□□□□ -0.37
PDGFD-202ENST00000393158 USP40Q9NVE5 1235 aa12.77□□□□□ -0.37
PDGFD-202ENST00000393158 POTECB2RU33 542 aa12.77□□□□□ -0.37
PDGFD-202ENST00000393158 LIFRP42702 1097 aa12.77□□□□□ -0.37
PDGFD-202ENST00000393158 MCM2P49736 904 aa12.77□□□□□ -0.37
PDGFD-202ENST00000393158 ZNF274Q96GC6 653 aaPredicted RBP12.77□□□□□ -0.37
PDGFD-202ENST00000393158 ZKSCAN3Q9BRR0 538 aa12.77□□□□□ -0.37
PDGFD-202ENST00000393158 NCOA5Q9HCD5 579 aaKnown RBP12.77□□□□□ -0.37
PDGFD-202ENST00000393158 RANBP6O60518 1105 aaKnown RBP12.76□□□□□ -0.37
PDGFD-202ENST00000393158 MCM5P33992 734 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 RAB3GAP1Q15042 981 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 TATDN1Q6P1N9 297 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 CLEC17AQ6ZS10 378 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 STK11IPQ8N1F8 1099 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 NSUN7Q8NE18 718 aaKnown RBP12.76□□□□□ -0.37
PDGFD-202ENST00000393158 ANKS1AQ92625 1134 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 SLKQ9H2G2 1235 aaPredicted RBP12.76□□□□□ -0.37
PDGFD-202ENST00000393158 MINDY4BA8MYZ0 360 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 JAK2O60674 1132 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 TROAPQ12815 778 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 APOA5Q6Q788 366 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 NIM1KQ8IY84 436 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 BAG3O95817 575 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 LDHCP07864 332 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 FBXW7Q969H0 707 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 MTA3Q9BTC8 594 aa12.76□□□□□ -0.37
PDGFD-202ENST00000393158 SCAF8Q9UPN6 1271 aaKnown RBP12.76□□□□□ -0.37
PDGFD-202ENST00000393158 RBM10P98175 930 aaKnown RBP12.75□□□□□ -0.37
PDGFD-202ENST00000393158 MFSD6Q6ZSS7 791 aa12.75□□□□□ -0.37
PDGFD-202ENST00000393158 CERS3Q8IU89 383 aa12.75□□□□□ -0.37
PDGFD-202ENST00000393158 EHD4Q9H223 541 aa12.75□□□□□ -0.37
PDGFD-202ENST00000393158 ANGEL1Q9UNK9 670 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms