RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 DHX8Q14562 1220 aaKnown RBP17.24■□□□□ 0.35
SCFD2-201ENST00000388940 NCAPHQ15003 741 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 CAVIN4Q5BKX8 364 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 RILPL1Q5EBL4 403 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 ZNF654Q8IZM8 581 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 BRIP1Q9BX63 1249 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 KCND1Q9NSA2 647 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 RAI14Q9P0K7 980 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 MINPP1Q9UNW1 487 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 DLEC1Q9Y238 1755 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 CNTNAP4Q9C0A0 1308 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 UBE2Q2LH0YL09 131 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 SEMA3EO15041 775 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 KCNQ2O43526 872 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 PCP11498 1178 aaKnown RBP17.24■□□□□ 0.35
SCFD2-201ENST00000388940 GUCY1A2P33402 732 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 GYG1P46976 350 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 KRI1Q8N9T8 703 aaKnown RBP17.24■□□□□ 0.35
SCFD2-201ENST00000388940 LINC00116Q8NCU8 138 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 ZKSCAN3Q9BRR0 538 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 UBAC1Q9BSL1 405 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 ABCF2Q9UG63 623 aa17.24■□□□□ 0.35
SCFD2-201ENST00000388940 LTBP4Q8N2S1 1624 aa17.23■□□□□ 0.35
SCFD2-201ENST00000388940 PDS5AQ29RF7 1337 aaKnown RBP17.23■□□□□ 0.35
SCFD2-201ENST00000388940 BTBD18B2RXH4 712 aa17.23■□□□□ 0.35
SCFD2-201ENST00000388940 FGRP09769 529 aa17.23■□□□□ 0.35
SCFD2-201ENST00000388940 C3orf67Q6ZVT6 689 aa17.23■□□□□ 0.35
SCFD2-201ENST00000388940 DIS3L2Q8IYB7 885 aaKnown RBP17.23■□□□□ 0.35
SCFD2-201ENST00000388940 FBXW7Q969H0 707 aa17.23■□□□□ 0.35
SCFD2-201ENST00000388940 MORC2Q9Y6X9 1032 aaPredicted RBP17.23■□□□□ 0.35
SCFD2-201ENST00000388940 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
SCFD2-201ENST00000388940 MYH2Q9UKX2 1941 aa17.23■□□□□ 0.35
SCFD2-201ENST00000388940 RIOK3O14730 519 aaKnown RBP17.23■□□□□ 0.35
SCFD2-201ENST00000388940 TOB1P50616 345 aaPredicted RBP17.23■□□□□ 0.35
SCFD2-201ENST00000388940 CCZ1BP86790 482 aa17.23■□□□□ 0.35
SCFD2-201ENST00000388940 CCZ1P86791 482 aaPredicted RBP17.23■□□□□ 0.35
SCFD2-201ENST00000388940 RNF26Q9BY78 433 aaPredicted RBP17.23■□□□□ 0.35
SCFD2-201ENST00000388940 KCNH3Q9ULD8 1083 aa17.23■□□□□ 0.35
SCFD2-201ENST00000388940 BIN1O00499 593 aa17.22■□□□□ 0.35
SCFD2-201ENST00000388940 SKILP12757 684 aa17.22■□□□□ 0.35
SCFD2-201ENST00000388940 KRBA2Q6ZNG9 492 aa17.22■□□□□ 0.35
SCFD2-201ENST00000388940 FBXO33Q7Z6M2 555 aa17.22■□□□□ 0.35
SCFD2-201ENST00000388940 STK11IPQ8N1F8 1099 aa17.22■□□□□ 0.35
SCFD2-201ENST00000388940 SDR42E1Q8WUS8 393 aa17.22■□□□□ 0.35
SCFD2-201ENST00000388940 FAM84BQ96KN1 310 aaPredicted RBP17.22■□□□□ 0.35
SCFD2-201ENST00000388940 CLIC6Q96NY7 704 aa17.22■□□□□ 0.35
SCFD2-201ENST00000388940 IQSEC3Q9UPP2 1182 aaPredicted RBP17.22■□□□□ 0.35
SCFD2-201ENST00000388940 ZBTB22O15209 634 aa17.21■□□□□ 0.35
SCFD2-201ENST00000388940 CTIFO43310 598 aaKnown RBP17.21■□□□□ 0.35
SCFD2-201ENST00000388940 MYO1BO43795 1136 aa17.21■□□□□ 0.35
SCFD2-201ENST00000388940 PTPREP23469 700 aa17.21■□□□□ 0.35
SCFD2-201ENST00000388940 ARID5BQ14865 1188 aa17.21■□□□□ 0.35
SCFD2-201ENST00000388940 ZNF579Q8NAF0 562 aaKnown RBP17.21■□□□□ 0.35
SCFD2-201ENST00000388940 PRDM4Q9UKN5 801 aa17.21■□□□□ 0.35
SCFD2-201ENST00000388940 PAXBP1Q9Y5B6 917 aa17.21■□□□□ 0.35
SCFD2-201ENST00000388940 BAZ2AQ9UIF9 1905 aaKnown RBP17.21■□□□□ 0.35
SCFD2-201ENST00000388940 MYH13Q9UKX3 1938 aa17.21■□□□□ 0.35
SCFD2-201ENST00000388940 TNKSO95271 1327 aa17.21■□□□□ 0.35
SCFD2-201ENST00000388940 MINDY4BA8MYZ0 360 aa17.21■□□□□ 0.35
SCFD2-201ENST00000388940 TNNT1P13805 278 aa17.21■□□□□ 0.35
SCFD2-201ENST00000388940 TMED8Q6PL24 325 aaPredicted RBP17.21■□□□□ 0.35
SCFD2-201ENST00000388940 FILIP1Q7Z7B0 1213 aa17.21■□□□□ 0.35
SCFD2-201ENST00000388940 NOL10Q9BSC4 688 aaKnown RBP17.21■□□□□ 0.35
SCFD2-201ENST00000388940 KCNJ14Q9UNX9 436 aa17.21■□□□□ 0.35
SCFD2-201ENST00000388940 COL24A1Q17RW2 1714 aa17.2■□□□□ 0.34
SCFD2-201ENST00000388940 TPD52L1Q16890 204 aaPredicted RBP17.2■□□□□ 0.34
SCFD2-201ENST00000388940 LONRF3Q496Y0 759 aa17.2■□□□□ 0.34
SCFD2-201ENST00000388940 METTL16Q86W50 562 aaKnown RBP17.2■□□□□ 0.34
SCFD2-201ENST00000388940 C16orf45Q96MC5 204 aaPredicted RBP17.2■□□□□ 0.34
SCFD2-201ENST00000388940 ZSCAN10Q96SZ4 725 aaPredicted RBP17.2■□□□□ 0.34
SCFD2-201ENST00000388940 XPO4Q9C0E2 1151 aaKnown RBP17.2■□□□□ 0.34
SCFD2-201ENST00000388940 NYXQ9GZU5 481 aa17.2■□□□□ 0.34
SCFD2-201ENST00000388940 FBXO2Q9UK22 296 aaPredicted RBP17.2■□□□□ 0.34
SCFD2-201ENST00000388940 RC3H1Q5TC82 1133 aaKnown RBP17.2■□□□□ 0.34
SCFD2-201ENST00000388940 CNNM3Q8NE01 707 aa17.2■□□□□ 0.34
SCFD2-201ENST00000388940 NUP133Q8WUM0 1156 aa17.2■□□□□ 0.34
SCFD2-201ENST00000388940 BCL2L12Q9HB09 334 aa17.2■□□□□ 0.34
SCFD2-201ENST00000388940 IFNKQ9P0W0 207 aa17.2■□□□□ 0.34
SCFD2-201ENST00000388940 CEP131Q9UPN4 1083 aa17.2■□□□□ 0.34
SCFD2-201ENST00000388940 MDM2Q00987 491 aaPredicted RBP17.19■□□□□ 0.34
SCFD2-201ENST00000388940 PNOCQ13519 176 aa17.19■□□□□ 0.34
SCFD2-201ENST00000388940 CCDC150Q8NCX0 1101 aa17.19■□□□□ 0.34
SCFD2-201ENST00000388940 CELF1Q92879 486 aaKnown RBP17.19■□□□□ 0.34
SCFD2-201ENST00000388940 HSD3B7Q9H2F3 369 aa17.19■□□□□ 0.34
SCFD2-201ENST00000388940 HOOK1Q9UJC3 728 aaKnown RBP17.19■□□□□ 0.34
SCFD2-201ENST00000388940 NUTM2BA6NNL0 878 aaPredicted RBP17.19■□□□□ 0.34
SCFD2-201ENST00000388940 NUTM2EB1AL46 878 aaPredicted RBP17.19■□□□□ 0.34
SCFD2-201ENST00000388940 PRPF3O43395 683 aaKnown RBP17.19■□□□□ 0.34
SCFD2-201ENST00000388940 TBC1D9BQ66K14 1250 aa17.19■□□□□ 0.34
SCFD2-201ENST00000388940 NUTM2AQ8IVF1 878 aaPredicted RBP17.19■□□□□ 0.34
SCFD2-201ENST00000388940 ZNF710Q8N1W2 664 aa17.19■□□□□ 0.34
SCFD2-201ENST00000388940 ENAHQ8N8S7 591 aaPredicted RBP17.19■□□□□ 0.34
SCFD2-201ENST00000388940 ZNF384Q8TF68 577 aa17.19■□□□□ 0.34
SCFD2-201ENST00000388940 RBM28Q9NW13 759 aaKnown RBP17.19■□□□□ 0.34
SCFD2-201ENST00000388940 NARFQ9UHQ1 456 aa17.19■□□□□ 0.34
SCFD2-201ENST00000388940 SRPRBQ9Y5M8 271 aaKnown RBP17.19■□□□□ 0.34
SCFD2-201ENST00000388940 WTIPA6NIX2 430 aaPredicted RBP17.18■□□□□ 0.34
SCFD2-201ENST00000388940 SMC2O95347 1197 aa17.18■□□□□ 0.34
SCFD2-201ENST00000388940 CALM1P0DP23 149 aa17.18■□□□□ 0.34
SCFD2-201ENST00000388940 CALM2P0DP24 149 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms