RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 TCP11L1Q9NUJ3 509 aa15.82■□□□□ 0.12
SEC13-203ENST00000383801 DLEC1Q9Y238 1755 aa15.81■□□□□ 0.12
SEC13-203ENST00000383801 TNKSO95271 1327 aa15.81■□□□□ 0.12
SEC13-203ENST00000383801 DDAH1O94760 285 aa15.81■□□□□ 0.12
SEC13-203ENST00000383801 GTF2IP78347 998 aa15.81■□□□□ 0.12
SEC13-203ENST00000383801 HDLBPQ00341 1268 aaKnown RBP15.81■□□□□ 0.12
SEC13-203ENST00000383801 SSRP1Q08945 709 aaKnown RBP15.81■□□□□ 0.12
SEC13-203ENST00000383801 ZSCAN23Q3MJ62 389 aa15.81■□□□□ 0.12
SEC13-203ENST00000383801 HHIPL2Q6UWX4 724 aa15.81■□□□□ 0.12
SEC13-203ENST00000383801 DGKHQ86XP1 1220 aa15.81■□□□□ 0.12
SEC13-203ENST00000383801 TRIM22Q8IYM9 498 aa15.81■□□□□ 0.12
SEC13-203ENST00000383801 FANCBQ8NB91 859 aa15.81■□□□□ 0.12
SEC13-203ENST00000383801 INCENPQ9NQS7 918 aa15.81■□□□□ 0.12
SEC13-203ENST00000383801 FMNL1O95466 1100 aaPredicted RBP15.8■□□□□ 0.12
SEC13-203ENST00000383801 ADD1P35611 737 aaKnown RBP15.8■□□□□ 0.12
SEC13-203ENST00000383801 BTDP43251 543 aa15.8■□□□□ 0.12
SEC13-203ENST00000383801 RTN1Q16799 776 aa15.8■□□□□ 0.12
SEC13-203ENST00000383801 IFIT1BQ5T764 474 aaKnown RBP15.8■□□□□ 0.12
SEC13-203ENST00000383801 MSL1Q68DK7 614 aa15.8■□□□□ 0.12
SEC13-203ENST00000383801 CATIPQ7Z7H3 387 aa15.8■□□□□ 0.12
SEC13-203ENST00000383801 MICU3Q86XE3 530 aa15.8■□□□□ 0.12
SEC13-203ENST00000383801 ZNF654Q8IZM8 581 aa15.8■□□□□ 0.12
SEC13-203ENST00000383801 SH3RF3Q8TEJ3 882 aaPredicted RBP15.8■□□□□ 0.12
SEC13-203ENST00000383801 C7orf43Q8WVR3 580 aa15.8■□□□□ 0.12
SEC13-203ENST00000383801 SPATA32Q96LK8 384 aa15.8■□□□□ 0.12
SEC13-203ENST00000383801 GPR101Q96P66 508 aaPredicted RBP15.8■□□□□ 0.12
SEC13-203ENST00000383801 FAM217BQ9NTX9 383 aaPredicted RBP15.8■□□□□ 0.12
SEC13-203ENST00000383801 FIBPO43427 364 aa15.79■□□□□ 0.12
SEC13-203ENST00000383801 RANBP6O60518 1105 aaKnown RBP15.79■□□□□ 0.12
SEC13-203ENST00000383801 CDC27P30260 824 aa15.79■□□□□ 0.12
SEC13-203ENST00000383801 STRIP1Q5VSL9 837 aa15.79■□□□□ 0.12
SEC13-203ENST00000383801 FERMT3Q86UX7 667 aa15.79■□□□□ 0.12
SEC13-203ENST00000383801 NKX2-3Q8TAU0 364 aa15.79■□□□□ 0.12
SEC13-203ENST00000383801 RNF26Q9BY78 433 aaPredicted RBP15.79■□□□□ 0.12
SEC13-203ENST00000383801 RCOR1Q9UKL0 485 aa15.79■□□□□ 0.12
SEC13-203ENST00000383801 MYH15Q9Y2K3 1946 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 RIMBP2O15034 1052 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 DEXIO95424 95 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 TRIM29Q14134 588 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 DIXDC1Q155Q3 683 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 FOXD4L6Q3SYB3 417 aaPredicted RBP15.78■□□□□ 0.12
SEC13-203ENST00000383801 CCDC183Q5T5S1 534 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 LRSAM1Q6UWE0 723 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 FOXD4L3Q6VB84 417 aaPredicted RBP15.78■□□□□ 0.12
SEC13-203ENST00000383801 ENAHQ8N8S7 591 aaPredicted RBP15.78■□□□□ 0.12
SEC13-203ENST00000383801 LEO1Q8WVC0 666 aaPredicted RBP15.78■□□□□ 0.12
SEC13-203ENST00000383801 ALG1Q9BT22 464 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 GDPD2Q9HCC8 539 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 TMEM63CQ9P1W3 806 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 JAG2Q9Y219 1238 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 C10orf71Q711Q0 1435 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 GOLGA6L4A6NEF3 574 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 TSPY2A6NKD2 308 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 GADD45BO75293 160 aaPredicted RBP15.78■□□□□ 0.12
SEC13-203ENST00000383801 RHBDL3P58872 404 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 GRIK5Q16478 980 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 TTC6Q86TZ1 520 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 TEX11Q8IYF3 940 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 ZNF444Q8N0Y2 327 aaPredicted RBP15.78■□□□□ 0.12
SEC13-203ENST00000383801 CRACR2BQ8N4Y2 399 aaPredicted RBP15.78■□□□□ 0.12
SEC13-203ENST00000383801 TGFBRAP1Q8WUH2 860 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 CHAMP1Q96JM3 812 aa15.78■□□□□ 0.12
SEC13-203ENST00000383801 RBM27Q9P2N5 1060 aaKnown RBP15.78■□□□□ 0.12
SEC13-203ENST00000383801 NAV1Q8NEY1 1877 aa15.77■□□□□ 0.12
SEC13-203ENST00000383801 FOCADQ5VW36 1801 aa15.77■□□□□ 0.11
SEC13-203ENST00000383801 NPM3O75607 178 aaKnown RBP15.77■□□□□ 0.11
SEC13-203ENST00000383801 POLR3DP05423 398 aaPredicted RBP15.77■□□□□ 0.11
SEC13-203ENST00000383801 XBP1P17861 261 aa15.77■□□□□ 0.11
SEC13-203ENST00000383801 TROAPQ12815 778 aa15.77■□□□□ 0.11
SEC13-203ENST00000383801 RTKN2Q8IZC4 609 aa15.77■□□□□ 0.11
SEC13-203ENST00000383801 GRPEL1Q9HAV7 217 aa15.77■□□□□ 0.11
SEC13-203ENST00000383801 MKNK2Q9HBH9 465 aa15.77■□□□□ 0.11
SEC13-203ENST00000383801 SENP2Q9HC62 589 aa15.77■□□□□ 0.11
SEC13-203ENST00000383801 RTEL1Q9NZ71 1219 aa15.77■□□□□ 0.11
SEC13-203ENST00000383801 CDK5RAP2Q96SN8 1893 aa15.76■□□□□ 0.11
SEC13-203ENST00000383801 CYP2D7A0A087X1C5 515 aa15.76■□□□□ 0.11
SEC13-203ENST00000383801 USP17L8P0C7I0 530 aa15.76■□□□□ 0.11
SEC13-203ENST00000383801 KIAA2012Q0VF49 1180 aa15.76■□□□□ 0.11
SEC13-203ENST00000383801 SOGA3Q5TF21 947 aa15.76■□□□□ 0.11
SEC13-203ENST00000383801 C16orf86Q6ZW13 317 aa15.76■□□□□ 0.11
SEC13-203ENST00000383801 SLC51AQ86UW1 340 aa15.76■□□□□ 0.11
SEC13-203ENST00000383801 FAM177A1Q8N128 213 aaPredicted RBP15.76■□□□□ 0.11
SEC13-203ENST00000383801 ZKSCAN3Q9BRR0 538 aa15.76■□□□□ 0.11
SEC13-203ENST00000383801 POLR3EQ9NVU0 708 aa15.76■□□□□ 0.11
SEC13-203ENST00000383801 DAGLAQ9Y4D2 1042 aa15.76■□□□□ 0.11
SEC13-203ENST00000383801 SLX4Q8IY92 1834 aa15.76■□□□□ 0.11
SEC13-203ENST00000383801 SNED1Q8TER0 1413 aa15.75■□□□□ 0.11
SEC13-203ENST00000383801 MYO3BQ8WXR4 1341 aa15.75■□□□□ 0.11
SEC13-203ENST00000383801 PRPF3O43395 683 aaKnown RBP15.75■□□□□ 0.11
SEC13-203ENST00000383801 YEATS4O95619 227 aa15.75■□□□□ 0.11
SEC13-203ENST00000383801 U2AF2P26368 475 aaKnown RBP eCLIP15.75■□□□□ 0.115e-11■■□□□ 11.9
SEC13-203ENST00000383801 KIF5BP33176 963 aa15.75■□□□□ 0.11
SEC13-203ENST00000383801 GNAQP50148 359 aa15.75■□□□□ 0.11
SEC13-203ENST00000383801 AKAP17AQ02040 695 aaKnown RBP15.75■□□□□ 0.11
SEC13-203ENST00000383801 SAFBQ15424 915 aaKnown RBP eCLIP15.75■□□□□ 0.116e-6■□□□□ 10.6
SEC13-203ENST00000383801 NBPF11Q86T75 865 aa15.75■□□□□ 0.11
SEC13-203ENST00000383801 TTLL6Q8N841 843 aa15.75■□□□□ 0.11
SEC13-203ENST00000383801 TEKT1Q969V4 418 aa15.75■□□□□ 0.11
SEC13-203ENST00000383801 TTF2Q9UNY4 1162 aaKnown RBP15.75■□□□□ 0.11
SEC13-203ENST00000383801 FLT1P17948 1338 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms