RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 EVX2Q03828 476 aa17.05■□□□□ 0.32
SYNGR1-204ENST00000381535 CDC42EP5Q6NZY7 148 aa17.05■□□□□ 0.32
SYNGR1-204ENST00000381535 RSBN1LQ6PCB5 846 aaPredicted RBP17.05■□□□□ 0.32
SYNGR1-204ENST00000381535 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
SYNGR1-204ENST00000381535 TMTC2Q8N394 836 aa17.05■□□□□ 0.32
SYNGR1-204ENST00000381535 ZDHHC15Q96MV8 337 aa17.05■□□□□ 0.32
SYNGR1-204ENST00000381535 LY9Q9HBG7 655 aa17.05■□□□□ 0.32
SYNGR1-204ENST00000381535 BAZ2AQ9UIF9 1905 aaKnown RBP17.05■□□□□ 0.32
SYNGR1-204ENST00000381535 PSMD14O00487 310 aa17.04■□□□□ 0.32
SYNGR1-204ENST00000381535 DTNBO60941 627 aa17.04■□□□□ 0.32
SYNGR1-204ENST00000381535 PRDM1O75626 825 aa17.04■□□□□ 0.32
SYNGR1-204ENST00000381535 BRD1O95696 1058 aa17.04■□□□□ 0.32
SYNGR1-204ENST00000381535 WTAPQ15007 396 aa17.04■□□□□ 0.32
SYNGR1-204ENST00000381535 SLC4A8Q2Y0W8 1093 aa17.04■□□□□ 0.32
SYNGR1-204ENST00000381535 ZKSCAN3Q9BRR0 538 aa17.04■□□□□ 0.32
SYNGR1-204ENST00000381535 UBAC1Q9BSL1 405 aa17.04■□□□□ 0.32
SYNGR1-204ENST00000381535 SENP2Q9HC62 589 aa17.04■□□□□ 0.32
SYNGR1-204ENST00000381535 SERPINA10Q9UK55 444 aa17.04■□□□□ 0.32
SYNGR1-204ENST00000381535 FLT1P17948 1338 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 MYO3BQ8WXR4 1341 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 SCN9AQ15858 1988 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 CCDC69A6NI79 296 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 SYT1P21579 422 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 NT5C2P49902 561 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 PLCD1P51178 756 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 SYNE3Q6ZMZ3 975 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 SGMS1Q86VZ5 419 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 JDP2Q8WYK2 163 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 DYNLL2Q96FJ2 89 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 ANP32EQ9BTT0 268 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 MKNK2Q9HBH9 465 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 RNF181Q9P0P0 153 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 HPS5Q9UPZ3 1129 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 TIAM2Q8IVF5 1701 aa17.03■□□□□ 0.32
SYNGR1-204ENST00000381535 WDR33Q9C0J8 1336 aaKnown RBP17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 GOLGA8BA8MQT2 603 aa17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 NFKBIEO00221 500 aa17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 STX6O43752 255 aa17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 DHX16O60231 1041 aaKnown RBP17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 JAK2O60674 1132 aa17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 WDHD1O75717 1129 aaPredicted RBP17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 PDIA4P13667 645 aaKnown RBP17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 MCM4P33991 863 aa17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 PICALMQ13492 652 aa17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 FOXD4L5Q5VV16 416 aaPredicted RBP17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 LARP1BQ659C4 914 aaKnown RBP17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 RAB11FIP4Q86YS3 637 aa17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 ZNF444Q8N0Y2 327 aaPredicted RBP17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 SMARCC2Q8TAQ2 1214 aa17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 FOXD4L4Q8WXT5 416 aaPredicted RBP17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 GBP4Q96PP9 640 aa17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 ZSCAN10Q96SZ4 725 aaPredicted RBP17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 NCOA5Q9HCD5 579 aaKnown RBP17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 SLC12A7Q9Y666 1083 aa17.02■□□□□ 0.32
SYNGR1-204ENST00000381535 BRCA1P38398 1863 aaKnown RBP17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 ZBTB43O43298 467 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 TOMM70O94826 608 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 CTDNEP1O95476 244 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 LMNB1P20700 586 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 PDCP20941 246 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 PRELPP51888 382 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 CFAP100Q494V2 611 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 FAM47AQ5JRC9 791 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 TTC6Q86TZ1 520 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 IQCA1Q86XH1 822 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 NSUN7Q8NE18 718 aaKnown RBP17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 GMLQ99445 158 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 ZNF287Q9HBT7 754 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 NMRK2Q9NPI5 230 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 HDAC9Q9UKV0 1011 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 PCDHAC2Q9Y5I4 1007 aa17.01■□□□□ 0.31
SYNGR1-204ENST00000381535 ZC3H4Q9UPT8 1303 aaKnown RBP17■□□□□ 0.31
SYNGR1-204ENST00000381535 HSPA6P17066 643 aa17■□□□□ 0.31
SYNGR1-204ENST00000381535 CDK8P49336 464 aa17■□□□□ 0.31
SYNGR1-204ENST00000381535 METAP2P50579 478 aaKnown RBP eCLIP17■□□□□ 0.31
SYNGR1-204ENST00000381535 HMGN5P82970 282 aaKnown RBP17■□□□□ 0.31
SYNGR1-204ENST00000381535 TFAP4Q01664 338 aa17■□□□□ 0.31
SYNGR1-204ENST00000381535 CXCL9Q07325 125 aa17■□□□□ 0.31
SYNGR1-204ENST00000381535 SEC23AQ15436 765 aa17■□□□□ 0.31
SYNGR1-204ENST00000381535 APOA5Q6Q788 366 aa17■□□□□ 0.31
SYNGR1-204ENST00000381535 CLEC17AQ6ZS10 378 aa17■□□□□ 0.31
SYNGR1-204ENST00000381535 FAM184AQ8NB25 1140 aa17■□□□□ 0.31
SYNGR1-204ENST00000381535 DDX4Q9NQI0 724 aaKnown RBP17■□□□□ 0.31
SYNGR1-204ENST00000381535 TNKSO95271 1327 aa16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 LTBP3Q9NS15 1303 aa16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 TSPY2A6NKD2 308 aa16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 CPLX1O14810 134 aa16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 BAG4O95429 457 aaKnown RBP16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 ZSCAN22P10073 491 aaPredicted RBP16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 RASSF7Q02833 373 aa16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 TNIP1Q15025 636 aa16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 CCDC178Q5BJE1 867 aa16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 CIAPIN1Q6FI81 312 aa16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 C16orf86Q6ZW13 317 aa16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 AGBL3Q8NEM8 1001 aa16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 PRMT6Q96LA8 375 aaPredicted RBP16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 MTMR6Q9Y217 621 aa16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 ZBTB12Q9Y330 459 aaPredicted RBP16.99■□□□□ 0.31
SYNGR1-204ENST00000381535 ROBO3Q96MS0 1386 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms