RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 PRR5LQ6MZQ0 368 aa19.94■□□□□ 0.78
PDX1-201ENST00000381033 CTR9Q6PD62 1173 aa19.94■□□□□ 0.78
PDX1-201ENST00000381033 RBM43Q6ZSC3 357 aaKnown RBP19.94■□□□□ 0.78
PDX1-201ENST00000381033 ENGASEQ8NFI3 743 aa19.94■□□□□ 0.78
PDX1-201ENST00000381033 CERKQ8TCT0 537 aa19.94■□□□□ 0.78
PDX1-201ENST00000381033 NOL7Q9UMY1 257 aaKnown RBP19.94■□□□□ 0.78
PDX1-201ENST00000381033 NMT2O60551 498 aa19.94■□□□□ 0.78
PDX1-201ENST00000381033 STK38Q15208 465 aa19.94■□□□□ 0.78
PDX1-201ENST00000381033 UVSSAQ2YD98 709 aa19.94■□□□□ 0.78
PDX1-201ENST00000381033 KCNJ14Q9UNX9 436 aa19.94■□□□□ 0.78
PDX1-201ENST00000381033 CLSTN1O94985 981 aa19.93■□□□□ 0.78
PDX1-201ENST00000381033 MSNP26038 577 aaKnown RBP19.93■□□□□ 0.78
PDX1-201ENST00000381033 NDUFA8P51970 172 aa19.93■□□□□ 0.78
PDX1-201ENST00000381033 CBX8Q9HC52 389 aa19.93■□□□□ 0.78
PDX1-201ENST00000381033 TRPC5Q9UL62 973 aaPredicted RBP19.93■□□□□ 0.78
PDX1-201ENST00000381033 BAZ2BQ9UIF8 2168 aaKnown RBP19.93■□□□□ 0.78
PDX1-201ENST00000381033 TNKSO95271 1327 aa19.93■□□□□ 0.78
PDX1-201ENST00000381033 IRS2Q9Y4H2 1338 aa19.93■□□□□ 0.78
PDX1-201ENST00000381033 GYS1P13807 737 aa19.93■□□□□ 0.78
PDX1-201ENST00000381033 DMTNQ08495 405 aa19.93■□□□□ 0.78
PDX1-201ENST00000381033 CHMP4CQ96CF2 233 aa19.92■□□□□ 0.78
PDX1-201ENST00000381033 PLCD4Q9BRC7 762 aa19.92■□□□□ 0.78
PDX1-201ENST00000381033 ANKRD2Q9GZV1 360 aa19.92■□□□□ 0.78
PDX1-201ENST00000381033 WDHD1O75717 1129 aaPredicted RBP19.92■□□□□ 0.78
PDX1-201ENST00000381033 SF3A1Q15459 793 aaKnown RBP19.92■□□□□ 0.78
PDX1-201ENST00000381033 TIAM2Q8IVF5 1701 aa19.92■□□□□ 0.78
PDX1-201ENST00000381033 FAM200AQ8TCP9 573 aa19.92■□□□□ 0.78
PDX1-201ENST00000381033 ECM29Q5VYK3 1845 aa19.91■□□□□ 0.78
PDX1-201ENST00000381033 MYCNP04198 464 aaPredicted RBP19.91■□□□□ 0.78
PDX1-201ENST00000381033 DIXDC1Q155Q3 683 aa19.91■□□□□ 0.78
PDX1-201ENST00000381033 FAM47AQ5JRC9 791 aa19.91■□□□□ 0.78
PDX1-201ENST00000381033 SYNE3Q6ZMZ3 975 aa19.91■□□□□ 0.78
PDX1-201ENST00000381033 ZNF654Q8IZM8 581 aa19.91■□□□□ 0.78
PDX1-201ENST00000381033 ENAHQ8N8S7 591 aaPredicted RBP19.91■□□□□ 0.78
PDX1-201ENST00000381033 ZNF622Q969S3 477 aaKnown RBP eCLIP19.91■□□□□ 0.78
PDX1-201ENST00000381033 UBAC1Q9BSL1 405 aa19.91■□□□□ 0.78
PDX1-201ENST00000381033 RGL2O15211 777 aa19.91■□□□□ 0.78
PDX1-201ENST00000381033 SPTLC2O15270 562 aa19.91■□□□□ 0.78
PDX1-201ENST00000381033 SEC23AQ15436 765 aa19.91■□□□□ 0.78
PDX1-201ENST00000381033 RTN1Q16799 776 aa19.91■□□□□ 0.78
PDX1-201ENST00000381033 CCDC73Q6ZRK6 1079 aa19.91■□□□□ 0.78
PDX1-201ENST00000381033 C11orf57Q6ZUT1 292 aaPredicted RBP19.91■□□□□ 0.78
PDX1-201ENST00000381033 SPC24Q8NBT2 197 aa19.91■□□□□ 0.78
PDX1-201ENST00000381033 TTC12Q9H892 705 aaPredicted RBP19.91■□□□□ 0.78
PDX1-201ENST00000381033 DCP1AQ9NPI6 582 aaPredicted RBP19.91■□□□□ 0.78
PDX1-201ENST00000381033 ERICH2A1L162 156 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 BTBD18B2RXH4 712 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 CDKL5O76039 1030 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 SSRP1Q08945 709 aaKnown RBP19.9■□□□□ 0.78
PDX1-201ENST00000381033 GRAPQ13588 217 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 ANO1Q5XXA6 986 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 CPLX2Q6PUV4 134 aaKnown RBP19.9■□□□□ 0.78
PDX1-201ENST00000381033 SASS6Q6UVJ0 657 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 NBPF11Q86T75 865 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 GRAPLQ8TC17 118 aaPredicted RBP19.9■□□□□ 0.78
PDX1-201ENST00000381033 POLR3EQ9NVU0 708 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 ZKSCAN5Q9Y2L8 839 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.9■□□□□ 0.78
PDX1-201ENST00000381033 FAM160A1Q05DH4 1040 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 SART3Q15020 963 aaKnown RBP19.9■□□□□ 0.78
PDX1-201ENST00000381033 ADALQ6DHV7 355 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 PROM2Q8N271 834 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 FANCBQ8NB91 859 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 SHISA4Q96DD7 197 aa19.9■□□□□ 0.78
PDX1-201ENST00000381033 GNL2Q13823 731 aaKnown RBP19.89■□□□□ 0.77
PDX1-201ENST00000381033 ATL3Q6DD88 541 aa19.89■□□□□ 0.77
PDX1-201ENST00000381033 BRAPQ7Z569 592 aa19.89■□□□□ 0.77
PDX1-201ENST00000381033 FMR1NBQ8N0W7 255 aaPredicted RBP19.89■□□□□ 0.77
PDX1-201ENST00000381033 ESR2Q92731 530 aa19.89■□□□□ 0.77
PDX1-201ENST00000381033 MAP7D2Q96T17 732 aa19.89■□□□□ 0.77
PDX1-201ENST00000381033 RNF41Q9H4P4 317 aaPredicted RBP19.89■□□□□ 0.77
PDX1-201ENST00000381033 ANAPC4Q9UJX5 808 aa19.89■□□□□ 0.77
PDX1-201ENST00000381033 FMNL1O95466 1100 aaPredicted RBP19.89■□□□□ 0.77
PDX1-201ENST00000381033 SERPINB2P05120 415 aa19.89■□□□□ 0.77
PDX1-201ENST00000381033 USP17L8P0C7I0 530 aa19.89■□□□□ 0.77
PDX1-201ENST00000381033 IFNAR1P17181 557 aa19.89■□□□□ 0.77
PDX1-201ENST00000381033 ZNF165P49910 485 aa19.89■□□□□ 0.77
PDX1-201ENST00000381033 GPSM2P81274 684 aa19.89■□□□□ 0.77
PDX1-201ENST00000381033 HS1BP3Q53T59 392 aa19.89■□□□□ 0.77
PDX1-201ENST00000381033 CCDC39Q9UFE4 941 aa19.89■□□□□ 0.77
PDX1-201ENST00000381033 MROH7-TTC4A0A0A0MT08 1334 aa19.88■□□□□ 0.77
PDX1-201ENST00000381033 KINO60870 393 aaKnown RBP19.88■□□□□ 0.77
PDX1-201ENST00000381033 NR5A1Q13285 461 aa19.88■□□□□ 0.77
PDX1-201ENST00000381033 AXDND1Q5T1B0 1012 aaPredicted RBP19.88■□□□□ 0.77
PDX1-201ENST00000381033 MRPS27Q92552 414 aaKnown RBP19.88■□□□□ 0.77
PDX1-201ENST00000381033 CLIC6Q96NY7 704 aa19.88■□□□□ 0.77
PDX1-201ENST00000381033 BRIP1Q9BX63 1249 aa19.88■□□□□ 0.77
PDX1-201ENST00000381033 C17orf53Q8N3J3 647 aaPredicted RBP19.87■□□□□ 0.77
PDX1-201ENST00000381033 ZSCAN10Q96SZ4 725 aaPredicted RBP19.87■□□□□ 0.77
PDX1-201ENST00000381033 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.87■□□□□ 0.77
PDX1-201ENST00000381033 SEMA3EO15041 775 aa19.87■□□□□ 0.77
PDX1-201ENST00000381033 DDR1Q08345 913 aa19.87■□□□□ 0.77
PDX1-201ENST00000381033 DZIP1Q86YF9 867 aaKnown RBP19.87■□□□□ 0.77
PDX1-201ENST00000381033 CRACR2BQ8N4Y2 399 aaPredicted RBP19.87■□□□□ 0.77
PDX1-201ENST00000381033 OXER1Q8TDS5 423 aa19.87■□□□□ 0.77
PDX1-201ENST00000381033 PLEKHA8P1O95397 391 aa19.86■□□□□ 0.77
PDX1-201ENST00000381033 PSEN1P49768 467 aa19.86■□□□□ 0.77
PDX1-201ENST00000381033 SPECC1Q5M775 1068 aa19.86■□□□□ 0.77
PDX1-201ENST00000381033 RPGRQ92834 1020 aaKnown RBP19.86■□□□□ 0.77
PDX1-201ENST00000381033 YEATS4O95619 227 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms