RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 BTBD18B2RXH4 712 aa14.34□□□□□ -0.11
DNMT3A-204ENST00000380756 SSR1P43307 286 aaKnown RBP14.34□□□□□ -0.11
DNMT3A-204ENST00000380756 PCDHA5Q9Y5H7 936 aa14.34□□□□□ -0.11
DNMT3A-204ENST00000380756 SETBP1Q9Y6X0 1596 aa14.34□□□□□ -0.11
DNMT3A-204ENST00000380756 CARMIL3Q8ND23 1372 aa14.34□□□□□ -0.11
DNMT3A-204ENST00000380756 hCG_1642624A0A1W2PR95 340 aa14.33□□□□□ -0.11
DNMT3A-204ENST00000380756 PDE6AP16499 860 aa14.33□□□□□ -0.11
DNMT3A-204ENST00000380756 PTPN12Q05209 780 aaKnown RBP14.33□□□□□ -0.11
DNMT3A-204ENST00000380756 CETN1Q12798 172 aa14.33□□□□□ -0.11
DNMT3A-204ENST00000380756 ZNF827Q17R98 1081 aa14.33□□□□□ -0.11
DNMT3A-204ENST00000380756 TMEM132AQ24JP5 1023 aa14.33□□□□□ -0.11
DNMT3A-204ENST00000380756 CLIC6Q96NY7 704 aa14.33□□□□□ -0.11
DNMT3A-204ENST00000380756 TAB2Q9NYJ8 693 aa14.33□□□□□ -0.11
DNMT3A-204ENST00000380756 MACROD2A1Z1Q3 448 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 SLC39A14Q15043 492 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 KRBA2Q6ZNG9 492 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 NEK11Q8NG66 645 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 GPR108Q9NPR9 543 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 POLR3EQ9NVU0 708 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 VPS54Q9P1Q0 977 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 MAST3O60307 1309 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 ZMYM6O95789 1325 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 VAV2P52735 878 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 DESI2Q9BSY9 194 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 ADGRB3O60242 1522 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 PLCD1P51178 756 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 ZNF654Q8IZM8 581 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 LINC00301Q8NCQ3 95 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 PUS3Q9BZE2 481 aaKnown RBP14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 DENND2AQ9ULE3 1009 aa14.33□□□□□ -0.12
DNMT3A-204ENST00000380756 QRICH2Q9H0J4 1663 aa14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 TULP4Q9NRJ4 1543 aa14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 EBAG9O00559 213 aa14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 DDB1Q16531 1140 aa14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 LETM2Q2VYF4 491 aa14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 CSGALNACT2Q8N6G5 542 aa14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 GPR161Q8N6U8 529 aaKnown RBP14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 PPP2R2CQ9Y2T4 447 aa14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 CETN2P41208 172 aa14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 C10orf67Q8IYJ2 551 aa14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 JAG2Q9Y219 1238 aa14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 TBCAO75347 108 aaKnown RBP14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 TNNI2P48788 182 aa14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 RRP36Q96EU6 259 aaKnown RBP14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 SLF1Q9BQI6 1058 aa14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 NOC4LQ9BVI4 516 aaKnown RBP14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 FBXO3Q9UK99 471 aa14.32□□□□□ -0.12
DNMT3A-204ENST00000380756 HLA-DOAP06340 250 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 IBSPP21815 317 aaPredicted RBP14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 MAP2K1Q02750 393 aaPredicted RBP14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 PRM3Q9NNZ6 103 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 IQSEC2Q5JU85 1478 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 ERVV-2B6SEH9 535 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 OAS2P29728 719 aaKnown RBP14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 PDE4DQ08499 809 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 TNIP1Q15025 636 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 PARP10Q53GL7 1025 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 ERMNQ8TAM6 284 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 ATRIPQ8WXE1 791 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 DDX17Q92841 729 aaKnown RBP14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 GSTTP1A0A1W2PQM5 241 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 TAOK3Q9H2K8 898 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 ADORA1P30542 326 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 DNAJC21Q5F1R6 531 aaKnown RBP14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 IFNL3Q8IZI9 196 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 CMTR1Q8N1G2 835 aaKnown RBP14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 SELENOOQ9BVL4 669 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 WWC3Q9ULE0 1092 aa14.31□□□□□ -0.12
DNMT3A-204ENST00000380756 MROH5Q6ZUA9 1318 aa14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 EFCAB8A8MWE9 144 aa14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 PPP1R2P41236 205 aa14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 MNAT1P51948 309 aa14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 TOB2Q14106 344 aaPredicted RBP14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 SMC1AQ14683 1233 aaKnown RBP14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 LONRF3Q496Y0 759 aa14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 APOA5Q6Q788 366 aa14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 STXBP4Q6ZWJ1 553 aa14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 TRIML1Q8N9V2 468 aa14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 NLRP1Q9C000 1473 aa14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 DDIT3P35638 169 aa14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 FANCBQ8NB91 859 aa14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 FAM76AQ8TAV0 307 aa14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 PPP1R13BQ96KQ4 1090 aa14.3□□□□□ -0.12
DNMT3A-204ENST00000380756 LDHBP07195 334 aaKnown RBP14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 RFC4P35249 363 aa14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 TPTE2Q6XPS3 522 aa14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 GIMAP7Q8NHV1 300 aa14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 SPTLC3Q9NUV7 552 aa14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 GCOM1H8Y6P7 765 aaPredicted RBP14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 IKBKBO14920 756 aa14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 PCCAP05165 728 aaPredicted RBP14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 MYZAPP0CAP1 466 aa14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 POTEJP0CG39 1038 aa14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 CTSWP56202 376 aa14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 KIF23Q02241 960 aaPredicted RBP14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 KIAA0753Q2KHM9 967 aa14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 SYCP3Q8IZU3 236 aa14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 ZBTB38Q8NAP3 1195 aaPredicted RBP14.29□□□□□ -0.12
DNMT3A-204ENST00000380756 OSBP2Q969R2 916 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms