RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 EYA1Q99502 592 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 CDHR2Q9BYE9 1310 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 A0A0G2JLW4 131 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 HGSO14964 777 aaPredicted RBP11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 SYF2O95926 243 aaKnown RBP11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 TUBB2AQ13885 445 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 MYL10Q9BUA6 226 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 TUBB2BQ9BVA1 445 aa11.87□□□□□ -0.51
ARHGEF39-201ENST00000378387 PPP1R12AO14974 1030 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 ZNF185O15231 689 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 CDC27P30260 824 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 PIP4K2AP48426 406 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 ENOX2Q16206 610 aaKnown RBP11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 SLC9C2Q5TAH2 1124 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 RRAGBQ5VZM2 374 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 FAM43BQ6ZT52 329 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 STOX1Q6ZVD7 989 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 CPLX4Q7Z7G2 160 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 TMTC1Q8IUR5 882 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 MSANTD4Q8NCY6 345 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 NUP133Q8WUM0 1156 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 SUCLG2Q96I99 432 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 CCDC85AQ96PX6 553 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 ADCY9O60503 1353 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 EIF3HO15372 352 aaKnown RBP eCLIP11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 MEFVO15553 781 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 KCNQ3O43525 872 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 IARSP41252 1262 aaKnown RBP11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 METAP2P50579 478 aaKnown RBP eCLIP11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 BEND3Q5T5X7 828 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 FBXO31Q5XUX0 539 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 KCNV1Q6PIU1 500 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 CYP26C1Q6V0L0 522 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 SPDL1Q96EA4 605 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 THOC1Q96FV9 657 aaKnown RBP11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 GRM8O00222 908 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 KRT86O43790 486 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 RPS6KA5O75582 802 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 CLTAP09496 248 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 PPP1R7Q15435 360 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 KRI1Q8N9T8 703 aaKnown RBP11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 MLKLQ8NB16 471 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 MIEF2Q96C03 454 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 UBAC1Q9BSL1 405 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 SPATS2LQ9NUQ6 558 aaKnown RBP11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 MAN1B1Q9UKM7 699 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 RAB21Q9UL25 225 aa11.86□□□□□ -0.51
ARHGEF39-201ENST00000378387 KIF28PB7ZC32 967 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 ALDH1L1O75891 902 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 USP14P54578 494 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 NNTQ13423 1086 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 SLC39A14Q15043 492 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 SPA17Q15506 151 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 KRT40Q6A162 431 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 TAX1BP1Q86VP1 789 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 SBNO1A3KN83 1393 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 ABCA6Q8N139 1617 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 PDHBP11177 359 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 TRIM21P19474 475 aaKnown RBP11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 TIMM10P62072 90 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 TCP11Q8WWU5 503 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 CTNND2Q9UQB3 1225 aa11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 EPN1Q9Y6I3 576 aaPredicted RBP11.85□□□□□ -0.51
ARHGEF39-201ENST00000378387 KRT14P02533 472 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 VAV2P52735 878 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 GSCP56915 257 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 PPARAQ07869 468 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 SHC4Q6S5L8 630 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 TEX11Q8IYF3 940 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 IL17REQ8NFR9 667 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 ZKSCAN4Q969J2 545 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 LUC7L2Q9Y383 392 aaKnown RBP11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 UNC13BO14795 1591 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 ATP1A1P05023 1023 aaKnown RBP11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 ARHGEF25Q86VW2 580 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 METTL16Q86W50 562 aaKnown RBP11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 MYD88Q99836 296 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 INTS13Q9NVM9 706 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 MAGEC2Q9UBF1 373 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 MROH7-TTC4A0A0A0MT08 1334 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 SYNRGQ9UMZ2 1314 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 ATP5J2-PTCD1G3V325 749 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 PTCD1O75127 700 aaKnown RBP11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 IFIT1P09914 478 aaKnown RBP11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 CDC25CP30307 473 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 USP5P45974 858 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 FXR1P51114 621 aaKnown RBP eCLIP11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 RRP36Q96EU6 259 aaKnown RBP11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 CTAGE1Q96RT6 745 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 DBF4Q9UBU7 674 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 MAP3K4Q9Y6R4 1608 aa11.84□□□□□ -0.51
ARHGEF39-201ENST00000378387 ZNF213O14771 459 aa11.83□□□□□ -0.51
ARHGEF39-201ENST00000378387 GPTP24298 496 aa11.83□□□□□ -0.51
ARHGEF39-201ENST00000378387 KIF5AQ12840 1032 aa11.83□□□□□ -0.51
ARHGEF39-201ENST00000378387 ILDR1Q86SU0 546 aaPredicted RBP11.83□□□□□ -0.51
ARHGEF39-201ENST00000378387 ARL8AQ96BM9 186 aa11.83□□□□□ -0.51
ARHGEF39-201ENST00000378387 CCDC43Q96MW1 224 aaKnown RBP11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms