RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 SLC10A4Q96EP9 437 aa14.78□□□□□ -0.04
VRK3-202ENST00000377011 WRNIP1Q96S55 665 aa14.78□□□□□ -0.04
VRK3-202ENST00000377011 RNF186Q9NXI6 227 aa14.78□□□□□ -0.04
VRK3-202ENST00000377011 TCRBV5S4A2TA0A5A2 114 aa14.77□□□□□ -0.05
VRK3-202ENST00000377011 ERC2O15083 957 aa14.77□□□□□ -0.05
VRK3-202ENST00000377011 EPB41L2O43491 1005 aaKnown RBP14.77□□□□□ -0.05
VRK3-202ENST00000377011 IREB2P48200 963 aaKnown RBP14.77□□□□□ -0.05
VRK3-202ENST00000377011 GSTO1P78417 241 aa14.77□□□□□ -0.05
VRK3-202ENST00000377011 MAP3K9P80192 1104 aa14.77□□□□□ -0.05
VRK3-202ENST00000377011 SHROOM1Q2M3G4 852 aaPredicted RBP14.77□□□□□ -0.05
VRK3-202ENST00000377011 CCDC84Q86UT8 332 aaPredicted RBP14.77□□□□□ -0.05
VRK3-202ENST00000377011 MAPKAPK5Q8IW41 473 aa14.77□□□□□ -0.05
VRK3-202ENST00000377011 TEX11Q8IYF3 940 aa14.77□□□□□ -0.05
VRK3-202ENST00000377011 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.77□□□□□ -0.05
VRK3-202ENST00000377011 TGFBRAP1Q8WUH2 860 aa14.77□□□□□ -0.05
VRK3-202ENST00000377011 HAUS7Q99871 368 aa14.77□□□□□ -0.05
VRK3-202ENST00000377011 HTTP42858 3142 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 CENPFP49454 3210 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 PHF20L1A8MW92 1017 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 ENTPD3O75355 529 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 TRPA1O75762 1119 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 LDHCP07864 332 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 PDE6AP16499 860 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 PPP4CP60510 307 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 ANKRD13AQ8IZ07 590 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 OPTNQ96CV9 577 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 PTPN18Q99952 460 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 PAG1Q9NWQ8 432 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 LAMB1P07942 1786 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 SALL3Q9BXA9 1300 aa14.76□□□□□ -0.05
VRK3-202ENST00000377011 IGF2BP3O00425 579 aaKnown RBP eCLIP14.75□□□□□ -0.05
VRK3-202ENST00000377011 PDE1AP54750 535 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 ZSCAN29Q8IWY8 852 aaPredicted RBP14.75□□□□□ -0.05
VRK3-202ENST00000377011 SLF2Q8IX21 1173 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 RIOK1Q9BRS2 568 aaKnown RBP14.75□□□□□ -0.05
VRK3-202ENST00000377011 OSBPL5Q9H0X9 879 aaPredicted RBP14.75□□□□□ -0.05
VRK3-202ENST00000377011 GRPEL1Q9HAV7 217 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 SAP30BPQ9UHR5 308 aaKnown RBP14.75□□□□□ -0.05
VRK3-202ENST00000377011 ZNF112Q9UJU3 913 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 ZNF532Q9HCE3 1301 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 SMIM22K7EJ46 135 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 JAG1P78504 1218 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 SLC9C2Q5TAH2 1124 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 PI4K2BQ8TCG2 481 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 AIDAQ96BJ3 306 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 DNAJC18Q9H819 358 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 ECHDC1Q9NTX5 307 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 MYH7P12883 1935 aa14.75□□□□□ -0.05
VRK3-202ENST00000377011 FLT1P17948 1338 aa14.74□□□□□ -0.05
VRK3-202ENST00000377011 CTCFP49711 727 aaPredicted RBP14.74□□□□□ -0.05
VRK3-202ENST00000377011 MCM2P49736 904 aa14.74□□□□□ -0.05
VRK3-202ENST00000377011 LCORLQ8N3X6 602 aa14.74□□□□□ -0.05
VRK3-202ENST00000377011 IL17RAQ96F46 866 aa14.74□□□□□ -0.05
VRK3-202ENST00000377011 MS4A4AQ96JQ5 239 aa14.74□□□□□ -0.05
VRK3-202ENST00000377011 GZF1Q9H116 711 aaPredicted RBP14.74□□□□□ -0.05
VRK3-202ENST00000377011 PALD1Q9ULE6 856 aa14.74□□□□□ -0.05
VRK3-202ENST00000377011 PRKAB2O43741 272 aa14.73□□□□□ -0.05
VRK3-202ENST00000377011 TBC1D8O95759 1140 aa14.73□□□□□ -0.05
VRK3-202ENST00000377011 TM4SF4P48230 202 aa14.73□□□□□ -0.05
VRK3-202ENST00000377011 MAP3K10Q02779 954 aa14.73□□□□□ -0.05
VRK3-202ENST00000377011 MAP3K12Q12852 859 aa14.73□□□□□ -0.05
VRK3-202ENST00000377011 KLHL40Q2TBA0 621 aa14.73□□□□□ -0.05
VRK3-202ENST00000377011 ZNF341Q9BYN7 854 aa14.73□□□□□ -0.05
VRK3-202ENST00000377011 STAP2Q9UGK3 403 aa14.73□□□□□ -0.05
VRK3-202ENST00000377011 PHIPQ8WWQ0 1821 aa14.73□□□□□ -0.05
VRK3-202ENST00000377011 MYH1P12882 1939 aa14.73□□□□□ -0.05
VRK3-202ENST00000377011 IRF6O14896 467 aa14.72□□□□□ -0.05
VRK3-202ENST00000377011 ANAPC15P60006 121 aa14.72□□□□□ -0.05
VRK3-202ENST00000377011 DDX60LQ5H9U9 1706 aaKnown RBP14.72□□□□□ -0.05
VRK3-202ENST00000377011 SPDYE5A6NIY4 337 aa14.72□□□□□ -0.05
VRK3-202ENST00000377011 BAG4O95429 457 aaKnown RBP14.72□□□□□ -0.05
VRK3-202ENST00000377011 ADD2P35612 726 aa14.72□□□□□ -0.05
VRK3-202ENST00000377011 BRI3BPQ8WY22 251 aa14.72□□□□□ -0.05
VRK3-202ENST00000377011 ARMT1Q9H993 441 aa14.72□□□□□ -0.05
VRK3-202ENST00000377011 NPM3O75607 178 aaKnown RBP14.71□□□□□ -0.05
VRK3-202ENST00000377011 BAG3O95817 575 aa14.71□□□□□ -0.05
VRK3-202ENST00000377011 ZBTB48P10074 688 aaPredicted RBP14.71□□□□□ -0.05
VRK3-202ENST00000377011 MCCP23508 829 aa14.71□□□□□ -0.05
VRK3-202ENST00000377011 CLCN1P35523 988 aa14.71□□□□□ -0.05
VRK3-202ENST00000377011 CAP1Q01518 475 aa14.71□□□□□ -0.05
VRK3-202ENST00000377011 DCAF15Q66K64 600 aa14.71□□□□□ -0.05
VRK3-202ENST00000377011 SDR42E1Q8WUS8 393 aa14.71□□□□□ -0.05
VRK3-202ENST00000377011 PUS7LQ9H0K6 701 aaKnown RBP14.71□□□□□ -0.05
VRK3-202ENST00000377011 BAZ2AQ9UIF9 1905 aaKnown RBP14.71□□□□□ -0.06
VRK3-202ENST00000377011 CYP2D6P10635 497 aa14.7□□□□□ -0.06
VRK3-202ENST00000377011 DGKZQ13574 1117 aa14.7□□□□□ -0.06
VRK3-202ENST00000377011 DOCK1Q14185 1865 aa14.7□□□□□ -0.06
VRK3-202ENST00000377011 TTF1Q15361 905 aaPredicted RBP14.7□□□□□ -0.06
VRK3-202ENST00000377011 IFNL1Q8IU54 200 aa14.7□□□□□ -0.06
VRK3-202ENST00000377011 ATAD5Q96QE3 1844 aa14.7□□□□□ -0.06
VRK3-202ENST00000377011 BEGAINQ9BUH8 593 aa14.7□□□□□ -0.06
VRK3-202ENST00000377011 CSADQ9Y600 493 aa14.7□□□□□ -0.06
VRK3-202ENST00000377011 MAGEB6P1A0A0J9YX57 407 aa14.69□□□□□ -0.06
VRK3-202ENST00000377011 MX1P20591 662 aa14.69□□□□□ -0.06
VRK3-202ENST00000377011 PLCD1P51178 756 aa14.69□□□□□ -0.06
VRK3-202ENST00000377011 MOGSQ13724 837 aa14.69□□□□□ -0.06
VRK3-202ENST00000377011 RRAGDQ9NQL2 400 aaPredicted RBP14.69□□□□□ -0.06
VRK3-202ENST00000377011 NAV1Q8NEY1 1877 aa14.69□□□□□ -0.06
VRK3-202ENST00000377011 BRCA2P51587 3418 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms