RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 AKR1B15C9JRZ8 316 aaPredicted RBP16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 SLC27A2O14975 620 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 SESTD1Q86VW0 696 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 ZBED2Q9BTP6 218 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 VAMP4O75379 141 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 FMNL3Q8IVF7 1028 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 IGSF22Q8N9C0 903 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 NSD2O96028 1365 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 CALCOCO2Q13137 446 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 CASC4Q6P4E1 433 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 KLHL7Q8IXQ5 586 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 TAB3Q8N5C8 712 aaPredicted RBP16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 MYCT1Q8N699 235 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 DDX12PQ92771 950 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 FRMPD2Q68DX3 1309 aaPredicted RBP16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 GCNT3O95395 438 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 GTF2A1P52655 376 aaPredicted RBP16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 DOK7Q18PE1 504 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 RBM28Q9NW13 759 aaKnown RBP16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 GGA1Q9UJY5 639 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 DENND2AQ9ULE3 1009 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 TRAF1Q13077 416 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 MSANTD4Q8NCY6 345 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 PRIMPOLQ96LW4 560 aa16.44■□□□□ 0.22
NOTCH4-201ENST00000375023 GAS8O95995 478 aa16.43■□□□□ 0.22
NOTCH4-201ENST00000375023 ATP2A2P16615 1042 aaKnown RBP16.43■□□□□ 0.22
NOTCH4-201ENST00000375023 ASIC2Q16515 512 aa16.43■□□□□ 0.22
NOTCH4-201ENST00000375023 ARHGAP44Q17R89 818 aa16.43■□□□□ 0.22
NOTCH4-201ENST00000375023 KIAA0586Q9BVV6 1533 aa16.43■□□□□ 0.22
NOTCH4-201ENST00000375023 ARHGEF35A5YM69 484 aa16.43■□□□□ 0.22
NOTCH4-201ENST00000375023 SULF1Q8IWU6 871 aa16.43■□□□□ 0.22
NOTCH4-201ENST00000375023 TRMT44Q8IYL2 757 aaKnown RBP16.43■□□□□ 0.22
NOTCH4-201ENST00000375023 RPS6KB1P23443 525 aa16.43■□□□□ 0.22
NOTCH4-201ENST00000375023 TTC6Q86TZ1 520 aa16.43■□□□□ 0.22
NOTCH4-201ENST00000375023 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.43■□□□□ 0.22
NOTCH4-201ENST00000375023 TAB2Q9NYJ8 693 aa16.43■□□□□ 0.22
NOTCH4-201ENST00000375023 MTRF1LQ9UGC7 380 aaKnown RBP16.43■□□□□ 0.22
NOTCH4-201ENST00000375023 PPP2R3AQ06190 1150 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 TNNI3KQ59H18 835 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 C10orf67Q8IYJ2 551 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 GDAP1L1Q96MZ0 367 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 FPGT-TNNI3KV9GXZ4 949 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 GPAA1O43292 621 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 ASXL1Q8IXJ9 1541 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 SPDYE16A6NNV3 312 aaPredicted RBP16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 MAN1A1P33908 653 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 SPDYE2Q495Y8 402 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 STMN4Q9H169 189 aaPredicted RBP16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 ARHGEF10LQ9HCE6 1279 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 TBC1D10BQ4KMP7 808 aaPredicted RBP16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 EDC3Q96F86 508 aaKnown RBP16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 IFT74Q96LB3 600 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 FAM193BQ96PV7 902 aaPredicted RBP16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 MTUS1Q9ULD2 1270 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 DNMBPQ6XZF7 1577 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 RIOK3O14730 519 aaKnown RBP16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 SMTNP53814 917 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 IGBP1P78318 339 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 TSTA3Q13630 321 aaPredicted RBP16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 JAKMIP2Q96AA8 810 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 KDM5BQ9UGL1 1544 aa16.42■□□□□ 0.22
NOTCH4-201ENST00000375023 NCAPG2Q86XI2 1143 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 MGARPQ8TDB4 240 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 TTC41PQ6P2S7 1318 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 RIMS2Q9UQ26 1411 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 CCDC14Q49A88 953 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 CSGALNACT2Q8N6G5 542 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 KIF9Q9HAQ2 790 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 PCDH11XQ9BZA7 1347 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 PCDH11YQ9BZA8 1340 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 CCDC157Q569K6 752 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 ARHGAP45Q92619 1136 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 VAV2P52735 878 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 KIFAP3Q92845 792 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 USP26Q9BXU7 913 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 ELP1O95163 1332 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 GOLGA6CA6NDK9 693 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 GOLGA6BA6NDN3 693 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 GOLGA6DP0CG33 693 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 RPL13P26373 211 aaKnown RBP16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 GOLGA6AQ9NYA3 693 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 COBLO75128 1261 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 PUM3Q15397 648 aaKnown RBP16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 RPUSD2Q8IZ73 545 aaKnown RBP16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 SNX29Q8TEQ0 813 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 MRPL44Q9H9J2 332 aaKnown RBP16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 SAMD15Q9P1V8 674 aa16.41■□□□□ 0.22
NOTCH4-201ENST00000375023 CD19P15391 556 aa16.4■□□□□ 0.22
NOTCH4-201ENST00000375023 CEP85LQ5SZL2 805 aa16.4■□□□□ 0.22
NOTCH4-201ENST00000375023 TPH2Q8IWU9 490 aa16.4■□□□□ 0.22
NOTCH4-201ENST00000375023 DCAF5Q96JK2 942 aa16.4■□□□□ 0.22
NOTCH4-201ENST00000375023 VPS54Q9P1Q0 977 aa16.4■□□□□ 0.22
NOTCH4-201ENST00000375023 POLIQ9UNA4 740 aa16.4■□□□□ 0.22
NOTCH4-201ENST00000375023 TTC36A6NLP5 189 aa16.4■□□□□ 0.22
NOTCH4-201ENST00000375023 EVCP57679 992 aa16.4■□□□□ 0.22
NOTCH4-201ENST00000375023 CAVIN2O95810 425 aa16.4■□□□□ 0.22
NOTCH4-201ENST00000375023 SYNRGQ9UMZ2 1314 aa16.4■□□□□ 0.22
NOTCH4-201ENST00000375023 ABCC1P33527 1531 aa16.4■□□□□ 0.22
NOTCH4-201ENST00000375023 TNNC1P63316 161 aa16.4■□□□□ 0.22
NOTCH4-201ENST00000375023 PPFIA1Q13136 1202 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms