RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 CNKSR2Q8WXI2 1034 aa25.28■■□□□ 1.64
MAP1LC3A-202ENST00000374837 OPTNQ96CV9 577 aa25.28■■□□□ 1.64
MAP1LC3A-202ENST00000374837 ZBTB48P10074 688 aaPredicted RBP25.27■■□□□ 1.64
MAP1LC3A-202ENST00000374837 SLC4A8Q2Y0W8 1093 aa25.27■■□□□ 1.64
MAP1LC3A-202ENST00000374837 FOXP4Q8IVH2 680 aaPredicted RBP25.27■■□□□ 1.64
MAP1LC3A-202ENST00000374837 DCP1AQ9NPI6 582 aaPredicted RBP25.27■■□□□ 1.64
MAP1LC3A-202ENST00000374837 MLLT1Q03111 559 aaPredicted RBP25.26■■□□□ 1.63
MAP1LC3A-202ENST00000374837 NOL9Q5SY16 702 aaKnown RBP25.26■■□□□ 1.63
MAP1LC3A-202ENST00000374837 METTL16Q86W50 562 aaKnown RBP25.26■■□□□ 1.63
MAP1LC3A-202ENST00000374837 STRBPQ96SI9 672 aaKnown RBP25.26■■□□□ 1.63
MAP1LC3A-202ENST00000374837 BEGAINQ9BUH8 593 aa25.26■■□□□ 1.63
MAP1LC3A-202ENST00000374837 HERC5Q9UII4 1024 aaKnown RBP25.26■■□□□ 1.63
MAP1LC3A-202ENST00000374837 SPDYE5A6NIY4 337 aa25.25■■□□□ 1.63
MAP1LC3A-202ENST00000374837 TRIM6-TRIM34B2RNG4 842 aa25.25■■□□□ 1.63
MAP1LC3A-202ENST00000374837 HLA-DOAP06340 250 aa25.25■■□□□ 1.63
MAP1LC3A-202ENST00000374837 ZMYM1Q5SVZ6 1142 aa25.25■■□□□ 1.63
MAP1LC3A-202ENST00000374837 ERO1BQ86YB8 467 aa25.25■■□□□ 1.63
MAP1LC3A-202ENST00000374837 REM2Q8IYK8 340 aaPredicted RBP25.25■■□□□ 1.63
MAP1LC3A-202ENST00000374837 SLC4A4Q9Y6R1 1079 aa25.25■■□□□ 1.63
MAP1LC3A-202ENST00000374837 THSD7BQ9C0I4 1608 aa25.25■■□□□ 1.63
MAP1LC3A-202ENST00000374837 M0R2C6 588 aa25.24■■□□□ 1.63
MAP1LC3A-202ENST00000374837 TTC6Q86TZ1 520 aa25.24■■□□□ 1.63
MAP1LC3A-202ENST00000374837 OTUD5Q96G74 571 aa25.24■■□□□ 1.63
MAP1LC3A-202ENST00000374837 SEC62Q99442 399 aaKnown RBP25.24■■□□□ 1.63
MAP1LC3A-202ENST00000374837 ATP8A2Q9NTI2 1148 aa25.24■■□□□ 1.63
MAP1LC3A-202ENST00000374837 MCM9Q9NXL9 1143 aa25.24■■□□□ 1.63
MAP1LC3A-202ENST00000374837 CTNND1O60716 968 aaKnown RBP25.23■■□□□ 1.63
MAP1LC3A-202ENST00000374837 POLR3DP05423 398 aaPredicted RBP25.23■■□□□ 1.63
MAP1LC3A-202ENST00000374837 TM4SF4P48230 202 aa25.23■■□□□ 1.63
MAP1LC3A-202ENST00000374837 RRP1BQ14684 758 aaKnown RBP25.23■■□□□ 1.63
MAP1LC3A-202ENST00000374837 CENPQQ7L2Z9 268 aaPredicted RBP25.23■■□□□ 1.63
MAP1LC3A-202ENST00000374837 SCYL3Q8IZE3 742 aa25.23■■□□□ 1.63
MAP1LC3A-202ENST00000374837 CRACR2BQ8N4Y2 399 aaPredicted RBP25.23■■□□□ 1.63
MAP1LC3A-202ENST00000374837 RILPL2Q969X0 211 aa25.23■■□□□ 1.63
MAP1LC3A-202ENST00000374837 DNAJC18Q9H819 358 aa25.23■■□□□ 1.63
MAP1LC3A-202ENST00000374837 MANSC4A6NHS7 340 aaPredicted RBP25.22■■□□□ 1.63
MAP1LC3A-202ENST00000374837 GPAA1O43292 621 aa25.22■■□□□ 1.63
MAP1LC3A-202ENST00000374837 PLCD1P51178 756 aa25.22■■□□□ 1.63
MAP1LC3A-202ENST00000374837 AK9Q5TCS8 1911 aa25.22■■□□□ 1.63
MAP1LC3A-202ENST00000374837 PPATQ06203 517 aa25.21■■□□□ 1.63
MAP1LC3A-202ENST00000374837 TRIM34Q9BYJ4 488 aa25.21■■□□□ 1.63
MAP1LC3A-202ENST00000374837 EHD4Q9H223 541 aa25.21■■□□□ 1.63
MAP1LC3A-202ENST00000374837 CYP2D6P10635 497 aa25.2■■□□□ 1.62
MAP1LC3A-202ENST00000374837 INHBEP58166 350 aa25.2■■□□□ 1.62
MAP1LC3A-202ENST00000374837 EVX2Q03828 476 aa25.2■■□□□ 1.62
MAP1LC3A-202ENST00000374837 SREBF2Q12772 1141 aa25.2■■□□□ 1.62
MAP1LC3A-202ENST00000374837 PPIL2Q13356 520 aa25.2■■□□□ 1.62
MAP1LC3A-202ENST00000374837 TICAM2Q86XR7 235 aa25.2■■□□□ 1.62
MAP1LC3A-202ENST00000374837 CCDC136Q96JN2 1154 aa25.2■■□□□ 1.62
MAP1LC3A-202ENST00000374837 MS4A4AQ96JQ5 239 aa25.2■■□□□ 1.62
MAP1LC3A-202ENST00000374837 PICK1Q9NRD5 415 aa25.2■■□□□ 1.62
MAP1LC3A-202ENST00000374837 RNF186Q9NXI6 227 aa25.2■■□□□ 1.62
MAP1LC3A-202ENST00000374837 SERPINB13Q9UIV8 391 aa25.2■■□□□ 1.62
MAP1LC3A-202ENST00000374837 GSG1L2A8MUP6 293 aa25.19■■□□□ 1.62
MAP1LC3A-202ENST00000374837 IRF6O14896 467 aa25.19■■□□□ 1.62
MAP1LC3A-202ENST00000374837 PTPRAP18433 802 aa25.19■■□□□ 1.62
MAP1LC3A-202ENST00000374837 CAP2P40123 477 aa25.19■■□□□ 1.62
MAP1LC3A-202ENST00000374837 RGS19P49795 217 aa25.19■■□□□ 1.62
MAP1LC3A-202ENST00000374837 OTOFQ9HC10 1997 aa25.18■■□□□ 1.62
MAP1LC3A-202ENST00000374837 USP17L12C9JPN9 530 aa25.18■■□□□ 1.62
MAP1LC3A-202ENST00000374837 USP17L21D6R901 530 aa25.18■■□□□ 1.62
MAP1LC3A-202ENST00000374837 GTF2A2P52657 109 aa25.18■■□□□ 1.62
MAP1LC3A-202ENST00000374837 TTC22Q5TAA0 569 aa25.18■■□□□ 1.62
MAP1LC3A-202ENST00000374837 DDRGK1Q96HY6 314 aa25.18■■□□□ 1.62
MAP1LC3A-202ENST00000374837 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.18■■□□□ 1.62
MAP1LC3A-202ENST00000374837 ZHX2Q9Y6X8 837 aa25.18■■□□□ 1.62
MAP1LC3A-202ENST00000374837 CDK5RAP2Q96SN8 1893 aa25.17■■□□□ 1.62
MAP1LC3A-202ENST00000374837 TESPA1A2RU30 521 aaPredicted RBP25.17■■□□□ 1.62
MAP1LC3A-202ENST00000374837 CA12O43570 354 aa25.17■■□□□ 1.62
MAP1LC3A-202ENST00000374837 TRPA1O75762 1119 aa25.17■■□□□ 1.62
MAP1LC3A-202ENST00000374837 GNAT2P19087 354 aa25.17■■□□□ 1.62
MAP1LC3A-202ENST00000374837 GABPAQ06546 454 aa25.17■■□□□ 1.62
MAP1LC3A-202ENST00000374837 FAM227BQ96M60 508 aa25.17■■□□□ 1.62
MAP1LC3A-202ENST00000374837 HELLSQ9NRZ9 838 aa25.17■■□□□ 1.62
MAP1LC3A-202ENST00000374837 TSKSQ9UJT2 592 aa25.17■■□□□ 1.62
MAP1LC3A-202ENST00000374837 FOCADQ5VW36 1801 aa25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 CYP2D7A0A087X1C5 515 aa25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 PATL2C9JE40 543 aaKnown RBP25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 GSPT1P15170 499 aaKnown RBP25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 SDSP20132 328 aa25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 JAG1P78504 1218 aa25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 C12orf60Q5U649 245 aa25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 TATDN1Q6P1N9 297 aa25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 GIMAP6Q6P9H5 292 aa25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 CTR9Q6PD62 1173 aa25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 CCDC129Q6ZRS4 1044 aa25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 CCDC84Q86UT8 332 aaPredicted RBP25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 PTPN18Q99952 460 aa25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 KCNH4Q9UQ05 1017 aa25.16■■□□□ 1.62
MAP1LC3A-202ENST00000374837 CCL15-CCL14A0A0B4J2E2 113 aa25.15■■□□□ 1.62
MAP1LC3A-202ENST00000374837 A0A0D9SFI3 127 aa25.15■■□□□ 1.62
MAP1LC3A-202ENST00000374837 SMIM22K7EJ46 135 aa25.15■■□□□ 1.62
MAP1LC3A-202ENST00000374837 NMIQ13287 307 aaPredicted RBP25.15■■□□□ 1.62
MAP1LC3A-202ENST00000374837 SNAPC2Q13487 334 aa25.15■■□□□ 1.62
MAP1LC3A-202ENST00000374837 CCL15Q16663 113 aa25.15■■□□□ 1.62
MAP1LC3A-202ENST00000374837 IFNL1Q8IU54 200 aa25.15■■□□□ 1.62
MAP1LC3A-202ENST00000374837 BRI3BPQ8WY22 251 aa25.15■■□□□ 1.62
MAP1LC3A-202ENST00000374837 EPB41L4AQ9HCS5 686 aaPredicted RBP25.15■■□□□ 1.62
MAP1LC3A-202ENST00000374837 MYH7P12883 1935 aa25.15■■□□□ 1.62
MAP1LC3A-202ENST00000374837 IGF2BP3O00425 579 aaKnown RBP eCLIP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms