RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 FOCADQ5VW36 1801 aa18.2■□□□□ 0.5
PFDN6-202ENST00000374607 NAV1Q8NEY1 1877 aa18.2■□□□□ 0.5
PFDN6-202ENST00000374607 CDK5RAP2Q96SN8 1893 aa18.2■□□□□ 0.5
PFDN6-202ENST00000374607 GSG1L2A8MUP6 293 aa18.19■□□□□ 0.5
PFDN6-202ENST00000374607 USP17L12C9JPN9 530 aa18.19■□□□□ 0.5
PFDN6-202ENST00000374607 USP17L21D6R901 530 aa18.19■□□□□ 0.5
PFDN6-202ENST00000374607 KIAA1211Q6ZU35 1233 aa18.19■□□□□ 0.5
PFDN6-202ENST00000374607 IFNL3Q8IZI9 196 aa18.19■□□□□ 0.5
PFDN6-202ENST00000374607 MKRN1Q9UHC7 482 aaKnown RBP18.19■□□□□ 0.5
PFDN6-202ENST00000374607 SERPINB13Q9UIV8 391 aa18.19■□□□□ 0.5
PFDN6-202ENST00000374607 MYH1P12882 1939 aa18.19■□□□□ 0.5
PFDN6-202ENST00000374607 SSC5DA1L4H1 1573 aa18.18■□□□□ 0.5
PFDN6-202ENST00000374607 FAM196BA6NMK8 535 aa18.18■□□□□ 0.5
PFDN6-202ENST00000374607 TBC1D12O60347 775 aa18.18■□□□□ 0.5
PFDN6-202ENST00000374607 CDC45O75419 566 aa18.18■□□□□ 0.5
PFDN6-202ENST00000374607 SLC3A2P08195 630 aaKnown RBP18.18■□□□□ 0.5
PFDN6-202ENST00000374607 ECE1P42892 770 aa18.18■□□□□ 0.5
PFDN6-202ENST00000374607 RGMBQ6NW40 437 aa18.18■□□□□ 0.5
PFDN6-202ENST00000374607 ZNF589Q86UQ0 364 aaPredicted RBP18.18■□□□□ 0.5
PFDN6-202ENST00000374607 RAD50Q92878 1312 aa18.18■□□□□ 0.5
PFDN6-202ENST00000374607 UNCXA6NJT0 531 aa18.17■□□□□ 0.5
PFDN6-202ENST00000374607 PLCD1P51178 756 aa18.17■□□□□ 0.5
PFDN6-202ENST00000374607 MAP3K11Q16584 847 aa18.17■□□□□ 0.5
PFDN6-202ENST00000374607 CTR9Q6PD62 1173 aa18.17■□□□□ 0.5
PFDN6-202ENST00000374607 STK11IPQ8N1F8 1099 aa18.17■□□□□ 0.5
PFDN6-202ENST00000374607 PIAS4Q8N2W9 510 aaPredicted RBP18.17■□□□□ 0.5
PFDN6-202ENST00000374607 JMYQ8N9B5 988 aa18.17■□□□□ 0.5
PFDN6-202ENST00000374607 CCDC102AQ96A19 550 aa18.17■□□□□ 0.5
PFDN6-202ENST00000374607 HHIPL1Q96JK4 782 aa18.17■□□□□ 0.5
PFDN6-202ENST00000374607 PICK1Q9NRD5 415 aa18.17■□□□□ 0.5
PFDN6-202ENST00000374607 CYP2D6P10635 497 aa18.16■□□□□ 0.5
PFDN6-202ENST00000374607 HSPD1P10809 573 aaKnown RBP18.16■□□□□ 0.5
PFDN6-202ENST00000374607 C12orf60Q5U649 245 aa18.16■□□□□ 0.5
PFDN6-202ENST00000374607 VPS53Q5VIR6 699 aa18.16■□□□□ 0.5
PFDN6-202ENST00000374607 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.16■□□□□ 0.52e-8■■□□□ 14.5
PFDN6-202ENST00000374607 ZKSCAN4Q969J2 545 aaPredicted RBP18.16■□□□□ 0.5
PFDN6-202ENST00000374607 EHD4Q9H223 541 aa18.16■□□□□ 0.5
PFDN6-202ENST00000374607 ELP3Q9H9T3 547 aa18.16■□□□□ 0.5
PFDN6-202ENST00000374607 ZNF287Q9HBT7 754 aa18.16■□□□□ 0.5
PFDN6-202ENST00000374607 CYP2D7A0A087X1C5 515 aa18.15■□□□□ 0.5
PFDN6-202ENST00000374607 RASSF10A6NK89 507 aa18.15■□□□□ 0.5
PFDN6-202ENST00000374607 LDLRAD1Q5T700 205 aa18.15■□□□□ 0.5
PFDN6-202ENST00000374607 CYP4F22Q6NT55 531 aa18.15■□□□□ 0.5
PFDN6-202ENST00000374607 MKNK2Q9HBH9 465 aa18.15■□□□□ 0.5
PFDN6-202ENST00000374607 EPB41L4AQ9HCS5 686 aaPredicted RBP18.15■□□□□ 0.5
PFDN6-202ENST00000374607 SWAP70Q9UH65 585 aa18.15■□□□□ 0.5
PFDN6-202ENST00000374607 MPHOSPH10O00566 681 aaKnown RBP18.14■□□□□ 0.49
PFDN6-202ENST00000374607 CTNND1O60716 968 aaKnown RBP18.14■□□□□ 0.49
PFDN6-202ENST00000374607 SLURP2P0DP57 97 aa18.14■□□□□ 0.49
PFDN6-202ENST00000374607 INPP5BP32019 993 aa18.14■□□□□ 0.49
PFDN6-202ENST00000374607 MKRN3Q13064 507 aaKnown RBP18.14■□□□□ 0.49
PFDN6-202ENST00000374607 VGLL4Q14135 290 aa18.14■□□□□ 0.49
PFDN6-202ENST00000374607 CERKLQ49MI3 558 aaPredicted RBP18.14■□□□□ 0.49
PFDN6-202ENST00000374607 SBK1Q52WX2 424 aa18.14■□□□□ 0.49
PFDN6-202ENST00000374607 DYNLL2Q96FJ2 89 aa18.14■□□□□ 0.49
PFDN6-202ENST00000374607 CLMNQ96JQ2 1002 aa18.14■□□□□ 0.49
PFDN6-202ENST00000374607 CAPNS2Q96L46 248 aa18.14■□□□□ 0.49
PFDN6-202ENST00000374607 CABP5Q9NP86 173 aa18.14■□□□□ 0.49
PFDN6-202ENST00000374607 CTNNA3Q9UI47 895 aa18.14■□□□□ 0.49
PFDN6-202ENST00000374607 BAZ2AQ9UIF9 1905 aaKnown RBP18.13■□□□□ 0.49
PFDN6-202ENST00000374607 SGSM2O43147 1006 aa18.13■□□□□ 0.49
PFDN6-202ENST00000374607 FGAP02671 866 aa18.13■□□□□ 0.49
PFDN6-202ENST00000374607 MAP3K10Q02779 954 aa18.13■□□□□ 0.49
PFDN6-202ENST00000374607 PDE4BQ07343 736 aa18.13■□□□□ 0.49
PFDN6-202ENST00000374607 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.13■□□□□ 0.49
PFDN6-202ENST00000374607 SCYL3Q8IZE3 742 aa18.13■□□□□ 0.49
PFDN6-202ENST00000374607 DSCC1Q9BVC3 393 aa18.13■□□□□ 0.49
PFDN6-202ENST00000374607 ZNF112Q9UJU3 913 aa18.13■□□□□ 0.49
PFDN6-202ENST00000374607 PHF20L1A8MW92 1017 aa18.12■□□□□ 0.49
PFDN6-202ENST00000374607 ZNF213O14771 459 aa18.12■□□□□ 0.49
PFDN6-202ENST00000374607 GDF11O95390 407 aa18.12■□□□□ 0.49
PFDN6-202ENST00000374607 PPARAQ07869 468 aa18.12■□□□□ 0.49
PFDN6-202ENST00000374607 ALX1Q15699 326 aa18.12■□□□□ 0.49
PFDN6-202ENST00000374607 OPTNQ96CV9 577 aa18.12■□□□□ 0.49
PFDN6-202ENST00000374607 OTUD5Q96G74 571 aa18.12■□□□□ 0.49
PFDN6-202ENST00000374607 ESYT1Q9BSJ8 1104 aa18.12■□□□□ 0.49
PFDN6-202ENST00000374607 ANO2Q9NQ90 1003 aa18.12■□□□□ 0.49
PFDN6-202ENST00000374607 TOMM22Q9NS69 142 aa18.12■□□□□ 0.49
PFDN6-202ENST00000374607 TAOK2Q9UL54 1235 aa18.12■□□□□ 0.49
PFDN6-202ENST00000374607 WDR33Q9C0J8 1336 aaKnown RBP18.12■□□□□ 0.49
PFDN6-202ENST00000374607 CAP2P40123 477 aa18.11■□□□□ 0.49
PFDN6-202ENST00000374607 CDK8P49336 464 aa18.11■□□□□ 0.49
PFDN6-202ENST00000374607 VEGFBP49765 207 aa18.11■□□□□ 0.49
PFDN6-202ENST00000374607 IMMTQ16891 758 aaKnown RBP18.11■□□□□ 0.49
PFDN6-202ENST00000374607 ABCB5Q2M3G0 1257 aa18.11■□□□□ 0.49
PFDN6-202ENST00000374607 C16orf86Q6ZW13 317 aa18.11■□□□□ 0.49
PFDN6-202ENST00000374607 METTL16Q86W50 562 aaKnown RBP18.11■□□□□ 0.49
PFDN6-202ENST00000374607 ERO1BQ86YB8 467 aa18.11■□□□□ 0.49
PFDN6-202ENST00000374607 ZNF444Q8N0Y2 327 aaPredicted RBP18.11■□□□□ 0.49
PFDN6-202ENST00000374607 DDX60LQ5H9U9 1706 aaKnown RBP18.1■□□□□ 0.49
PFDN6-202ENST00000374607 ASNSP08243 561 aa18.1■□□□□ 0.49
PFDN6-202ENST00000374607 EVX2Q03828 476 aa18.1■□□□□ 0.49
PFDN6-202ENST00000374607 CTDSPL2Q05D32 466 aa18.1■□□□□ 0.49
PFDN6-202ENST00000374607 NOGQ13253 232 aa18.1■□□□□ 0.49
PFDN6-202ENST00000374607 RAB3GAP1Q15042 981 aa18.1■□□□□ 0.49
PFDN6-202ENST00000374607 NOL9Q5SY16 702 aaKnown RBP18.1■□□□□ 0.49
PFDN6-202ENST00000374607 RASAL3Q86YV0 1011 aa18.1■□□□□ 0.49
PFDN6-202ENST00000374607 SLC44A5Q8NCS7 719 aa18.1■□□□□ 0.49
PFDN6-202ENST00000374607 WNK4Q96J92 1243 aa18.1■□□□□ 0.49
PFDN6-202ENST00000374607 DNAJC18Q9H819 358 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms