RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 CRACR2BQ8N4Y2 399 aaPredicted RBP19.19■□□□□ 0.66
HDHD3-202ENST00000374180 SEC62Q99442 399 aaKnown RBP19.19■□□□□ 0.66
HDHD3-202ENST00000374180 TRIM34Q9BYJ4 488 aa19.19■□□□□ 0.66
HDHD3-202ENST00000374180 FAM196BA6NMK8 535 aa19.18■□□□□ 0.66
HDHD3-202ENST00000374180 PHF20L1A8MW92 1017 aa19.18■□□□□ 0.66
HDHD3-202ENST00000374180 MKRN3Q13064 507 aaKnown RBP19.18■□□□□ 0.66
HDHD3-202ENST00000374180 SPRYD7Q5W111 196 aa19.18■□□□□ 0.66
HDHD3-202ENST00000374180 ZIC5Q96T25 663 aa19.18■□□□□ 0.66
HDHD3-202ENST00000374180 CDK5RAP2Q96SN8 1893 aa19.17■□□□□ 0.66
HDHD3-202ENST00000374180 GNAT2P19087 354 aa19.17■□□□□ 0.66
HDHD3-202ENST00000374180 KIF23Q02241 960 aaPredicted RBP19.17■□□□□ 0.66
HDHD3-202ENST00000374180 MAP2K1Q02750 393 aaPredicted RBP19.17■□□□□ 0.66
HDHD3-202ENST00000374180 METTL16Q86W50 562 aaKnown RBP19.17■□□□□ 0.66
HDHD3-202ENST00000374180 WNK4Q96J92 1243 aa19.17■□□□□ 0.66
HDHD3-202ENST00000374180 SNCAIPQ9Y6H5 919 aa19.17■□□□□ 0.66
HDHD3-202ENST00000374180 GSPT1P15170 499 aaKnown RBP19.16■□□□□ 0.66
HDHD3-202ENST00000374180 SDSP20132 328 aa19.16■□□□□ 0.66
HDHD3-202ENST00000374180 OPTNQ96CV9 577 aa19.16■□□□□ 0.66
HDHD3-202ENST00000374180 HELLSQ9NRZ9 838 aa19.16■□□□□ 0.66
HDHD3-202ENST00000374180 SERPINB13Q9UIV8 391 aa19.16■□□□□ 0.66
HDHD3-202ENST00000374180 FOCADQ5VW36 1801 aa19.16■□□□□ 0.66
HDHD3-202ENST00000374180 GSG1L2A8MUP6 293 aa19.16■□□□□ 0.66
HDHD3-202ENST00000374180 CTNND1O60716 968 aaKnown RBP19.16■□□□□ 0.66
HDHD3-202ENST00000374180 APPP05067 770 aa19.16■□□□□ 0.66
HDHD3-202ENST00000374180 ZBTB48P10074 688 aaPredicted RBP19.16■□□□□ 0.66
HDHD3-202ENST00000374180 PLCD1P51178 756 aa19.16■□□□□ 0.66
HDHD3-202ENST00000374180 NOL9Q5SY16 702 aaKnown RBP19.16■□□□□ 0.66
HDHD3-202ENST00000374180 ERO1BQ86YB8 467 aa19.16■□□□□ 0.66
HDHD3-202ENST00000374180 AMOTL1Q8IY63 956 aa19.16■□□□□ 0.66
HDHD3-202ENST00000374180 FAM227BQ96M60 508 aa19.16■□□□□ 0.66
HDHD3-202ENST00000374180 EHD4Q9H223 541 aa19.16■□□□□ 0.66
HDHD3-202ENST00000374180 PATL2C9JE40 543 aaKnown RBP19.15■□□□□ 0.66
HDHD3-202ENST00000374180 USP17L12C9JPN9 530 aa19.15■□□□□ 0.66
HDHD3-202ENST00000374180 USP17L21D6R901 530 aa19.15■□□□□ 0.66
HDHD3-202ENST00000374180 HIP1O00291 1037 aa19.15■□□□□ 0.66
HDHD3-202ENST00000374180 MCMDC2Q4G0Z9 681 aa19.15■□□□□ 0.66
HDHD3-202ENST00000374180 GIMAP6Q6P9H5 292 aa19.15■□□□□ 0.66
HDHD3-202ENST00000374180 REM2Q8IYK8 340 aaPredicted RBP19.15■□□□□ 0.66
HDHD3-202ENST00000374180 CNKSR2Q8WXI2 1034 aa19.15■□□□□ 0.66
HDHD3-202ENST00000374180 PICK1Q9NRD5 415 aa19.15■□□□□ 0.66
HDHD3-202ENST00000374180 MYH1P12882 1939 aa19.14■□□□□ 0.65
HDHD3-202ENST00000374180 SPDYE5A6NIY4 337 aa19.14■□□□□ 0.65
HDHD3-202ENST00000374180 GJA5P36382 358 aa19.14■□□□□ 0.65
HDHD3-202ENST00000374180 NMIQ13287 307 aaPredicted RBP19.14■□□□□ 0.65
HDHD3-202ENST00000374180 CCDC129Q6ZRS4 1044 aa19.14■□□□□ 0.65
HDHD3-202ENST00000374180 SCYL3Q8IZE3 742 aa19.14■□□□□ 0.65
HDHD3-202ENST00000374180 OTUD5Q96G74 571 aa19.14■□□□□ 0.65
HDHD3-202ENST00000374180 DNAJC18Q9H819 358 aa19.14■□□□□ 0.65
HDHD3-202ENST00000374180 DIAPH3Q9NSV4 1193 aa19.14■□□□□ 0.65
HDHD3-202ENST00000374180 A0A0D9SFI3 127 aa19.13■□□□□ 0.65
HDHD3-202ENST00000374180 CYP2D6P10635 497 aa19.13■□□□□ 0.65
HDHD3-202ENST00000374180 CAP2P40123 477 aa19.13■□□□□ 0.65
HDHD3-202ENST00000374180 PPATQ06203 517 aa19.13■□□□□ 0.65
HDHD3-202ENST00000374180 CTR9Q6PD62 1173 aa19.13■□□□□ 0.65
HDHD3-202ENST00000374180 SKAP1Q86WV1 359 aa19.13■□□□□ 0.65
HDHD3-202ENST00000374180 BEGAINQ9BUH8 593 aa19.13■□□□□ 0.65
HDHD3-202ENST00000374180 NACAP1Q9BZK3 213 aa19.13■□□□□ 0.65
HDHD3-202ENST00000374180 MANSC4A6NHS7 340 aaPredicted RBP19.12■□□□□ 0.65
HDHD3-202ENST00000374180 TDO2P48775 406 aa19.12■□□□□ 0.65
HDHD3-202ENST00000374180 SREBF2Q12772 1141 aa19.12■□□□□ 0.65
HDHD3-202ENST00000374180 C12orf60Q5U649 245 aa19.12■□□□□ 0.65
HDHD3-202ENST00000374180 WBP1LQ9NX94 342 aa19.12■□□□□ 0.65
HDHD3-202ENST00000374180 OTOFQ9HC10 1997 aa19.12■□□□□ 0.65
HDHD3-202ENST00000374180 CYP2D7A0A087X1C5 515 aa19.11■□□□□ 0.65
HDHD3-202ENST00000374180 PTPRAP18433 802 aa19.11■□□□□ 0.65
HDHD3-202ENST00000374180 INHBEP58166 350 aa19.11■□□□□ 0.65
HDHD3-202ENST00000374180 EVX2Q03828 476 aa19.11■□□□□ 0.65
HDHD3-202ENST00000374180 PPIL2Q13356 520 aa19.11■□□□□ 0.65
HDHD3-202ENST00000374180 RRP1BQ14684 758 aaKnown RBP19.11■□□□□ 0.65
HDHD3-202ENST00000374180 CWC27Q6UX04 472 aaKnown RBP19.11■□□□□ 0.65
HDHD3-202ENST00000374180 IFNL3Q8IZI9 196 aa19.11■□□□□ 0.65
HDHD3-202ENST00000374180 ARPP21Q9UBL0 812 aaPredicted RBP19.11■□□□□ 0.65
HDHD3-202ENST00000374180 ZHX2Q9Y6X8 837 aa19.11■□□□□ 0.65
HDHD3-202ENST00000374180 IRF6O14896 467 aa19.1■□□□□ 0.65
HDHD3-202ENST00000374180 TM4SF4P48230 202 aa19.1■□□□□ 0.65
HDHD3-202ENST00000374180 GTF2A2P52657 109 aa19.1■□□□□ 0.65
HDHD3-202ENST00000374180 MFAP1P55081 439 aaKnown RBP19.1■□□□□ 0.65
HDHD3-202ENST00000374180 GABPAQ06546 454 aa19.1■□□□□ 0.65
HDHD3-202ENST00000374180 SBK1Q52WX2 424 aa19.1■□□□□ 0.65
HDHD3-202ENST00000374180 TATDN1Q6P1N9 297 aa19.1■□□□□ 0.65
HDHD3-202ENST00000374180 EPB41L4AQ9HCS5 686 aaPredicted RBP19.1■□□□□ 0.65
HDHD3-202ENST00000374180 TAOK2Q9UL54 1235 aa19.1■□□□□ 0.65
HDHD3-202ENST00000374180 NAV1Q8NEY1 1877 aa19.1■□□□□ 0.65
HDHD3-202ENST00000374180 MINDY4BA8MYZ0 360 aa19.09■□□□□ 0.65
HDHD3-202ENST00000374180 HSPA1AP0DMV8 641 aaKnown RBP19.09■□□□□ 0.65
HDHD3-202ENST00000374180 HSPA1BP0DMV9 641 aaKnown RBP19.09■□□□□ 0.65
HDHD3-202ENST00000374180 CERKLQ49MI3 558 aaPredicted RBP19.09■□□□□ 0.65
HDHD3-202ENST00000374180 DYNLL2Q96FJ2 89 aa19.09■□□□□ 0.65
HDHD3-202ENST00000374180 NAPBQ9H115 298 aa19.09■□□□□ 0.65
HDHD3-202ENST00000374180 SWAP70Q9UH65 585 aa19.09■□□□□ 0.65
HDHD3-202ENST00000374180 GDF11O95390 407 aa19.09■□□□□ 0.65
HDHD3-202ENST00000374180 ASNSP08243 561 aa19.09■□□□□ 0.65
HDHD3-202ENST00000374180 SHMT1P34896 483 aa19.09■□□□□ 0.65
HDHD3-202ENST00000374180 SNAPC2Q13487 334 aa19.09■□□□□ 0.65
HDHD3-202ENST00000374180 VPS53Q5VIR6 699 aa19.09■□□□□ 0.65
HDHD3-202ENST00000374180 ZNF589Q86UQ0 364 aaPredicted RBP19.09■□□□□ 0.65
HDHD3-202ENST00000374180 MS4A4AQ96JQ5 239 aa19.09■□□□□ 0.65
HDHD3-202ENST00000374180 SIPA1L1O43166 1804 aa19.08■□□□□ 0.65
HDHD3-202ENST00000374180 BAZ2AQ9UIF9 1905 aaKnown RBP19.08■□□□□ 0.65
HDHD3-202ENST00000374180 CCDC171Q6TFL3 1326 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms