RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 KDM3BQ7LBC6 1761 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 ATP10DQ9P241 1426 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 GSPT1P15170 499 aaKnown RBP7.42□□□□□ -1.22
CHD6-203ENST00000373233 FERMT3Q86UX7 667 aa7.42□□□□□ -1.22
CHD6-203ENST00000373233 TUBBP07437 444 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 PAFAH1B1P43034 410 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 NLRP5P59047 1200 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 PUM3Q15397 648 aaKnown RBP7.41□□□□□ -1.22
CHD6-203ENST00000373233 SPATS2Q86XZ4 545 aaKnown RBP7.41□□□□□ -1.22
CHD6-203ENST00000373233 SMC6Q96SB8 1091 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 FAF1Q9UNN5 650 aaPredicted RBP7.41□□□□□ -1.22
CHD6-203ENST00000373233 ALS2Q96Q42 1657 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 CDKL5O76039 1030 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 MCMDC2Q4G0Z9 681 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 TACO1Q9BSH4 297 aaKnown RBP7.41□□□□□ -1.22
CHD6-203ENST00000373233 ABCC6O95255 1503 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 UBAC1Q9BSL1 405 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 KDM6AO15550 1401 aaPredicted RBP7.41□□□□□ -1.22
CHD6-203ENST00000373233 NAPBQ9H115 298 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 RBM8AQ9Y5S9 174 aaKnown RBP7.41□□□□□ -1.22
CHD6-203ENST00000373233 FSD2A1L4K1 749 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 PDE8AO60658 829 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 SYT1P21579 422 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 CCDC65Q8IXS2 484 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 LOC102724428A0A0B4J2F2 783 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 SMIM23A6NLE4 172 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 SIK1P57059 783 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 PSMD2Q13200 908 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 CDK5RAP3Q96JB5 506 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 STRCP1A6NGW2 1772 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 LRRD1A4D1F6 860 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 RABEP2Q9H5N1 569 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 USP54Q70EL1 1684 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 A6NNZ2 444 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 TMED1Q13445 227 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 TUBB8Q3ZCM7 444 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 SPTY2D1Q68D10 685 aaPredicted RBP7.41□□□□□ -1.22
CHD6-203ENST00000373233 PCCAP05165 728 aaPredicted RBP7.41□□□□□ -1.22
CHD6-203ENST00000373233 MAP3K9P80192 1104 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 RAB11FIP4Q86YS3 637 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 CNBD1Q8NA66 436 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 STAG1Q8WVM7 1258 aa7.41□□□□□ -1.22
CHD6-203ENST00000373233 MUM1Q2TAK8 710 aa7.4□□□□□ -1.22
CHD6-203ENST00000373233 KIAA1524Q8TCG1 905 aa7.4□□□□□ -1.22
CHD6-203ENST00000373233 NBPF3Q9H094 633 aa7.4□□□□□ -1.22
CHD6-203ENST00000373233 SEPT11Q9NVA2 429 aaKnown RBP7.4□□□□□ -1.22
CHD6-203ENST00000373233 RAD21O60216 631 aa7.4□□□□□ -1.22
CHD6-203ENST00000373233 GOLGA8BA8MQT2 603 aa7.4□□□□□ -1.22
CHD6-203ENST00000373233 STX6O43752 255 aa7.4□□□□□ -1.22
CHD6-203ENST00000373233 SELENOSQ9BQE4 189 aa7.4□□□□□ -1.22
CHD6-203ENST00000373233 PALLDQ8WX93 1383 aa7.4□□□□□ -1.22
CHD6-203ENST00000373233 ATP2B1P20020 1258 aa7.4□□□□□ -1.22
CHD6-203ENST00000373233 DNAJC8O75937 253 aaPredicted RBP7.4□□□□□ -1.22
CHD6-203ENST00000373233 XBP1P17861 261 aa7.4□□□□□ -1.22
CHD6-203ENST00000373233 VPS41P49754 854 aa7.4□□□□□ -1.22
CHD6-203ENST00000373233 ZC4H2Q9NQZ6 224 aa7.4□□□□□ -1.22
CHD6-203ENST00000373233 CA8P35219 290 aa7.4□□□□□ -1.23
CHD6-203ENST00000373233 HAND2P61296 217 aa7.4□□□□□ -1.23
CHD6-203ENST00000373233 ANO6Q4KMQ2 910 aa7.4□□□□□ -1.23
CHD6-203ENST00000373233 RUFY3Q7L099 469 aa7.4□□□□□ -1.23
CHD6-203ENST00000373233 ZBTB38Q8NAP3 1195 aaPredicted RBP7.4□□□□□ -1.23
CHD6-203ENST00000373233 HELBQ8NG08 1087 aaPredicted RBP7.4□□□□□ -1.23
CHD6-203ENST00000373233 TRPC5Q9UL62 973 aaPredicted RBP7.4□□□□□ -1.23
CHD6-203ENST00000373233 JCADQ9P266 1359 aa7.4□□□□□ -1.23
CHD6-203ENST00000373233 GOLGA6BA6NDN3 693 aa7.4□□□□□ -1.23
CHD6-203ENST00000373233 DDX12PQ92771 950 aa7.4□□□□□ -1.23
CHD6-203ENST00000373233 DTNBP1Q96EV8 351 aa7.4□□□□□ -1.23
CHD6-203ENST00000373233 XAGE2Q96GT9 111 aa7.4□□□□□ -1.23
CHD6-203ENST00000373233 CAPZA3Q96KX2 299 aa7.4□□□□□ -1.23
CHD6-203ENST00000373233 NLRP3Q96P20 1036 aa7.4□□□□□ -1.23
CHD6-203ENST00000373233 DBNDD2Q9BQY9 259 aa7.4□□□□□ -1.23
CHD6-203ENST00000373233 ZNF445P59923 1031 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 TSC22D3Q99576 134 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 YY1AP1Q9H869 796 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 MROH5Q6ZUA9 1318 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 TPTE2Q6XPS3 522 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 ANKRD2Q9GZV1 360 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 ELP1O95163 1332 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 ARFGAP2Q8N6H7 521 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 ZBTB1Q9Y2K1 713 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 LRRC37A3O60309 1634 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 CREB3L3Q68CJ9 461 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 TRIM22Q8IYM9 498 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 GDPD2Q9HCC8 539 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 WDHD1O75717 1129 aaPredicted RBP7.39□□□□□ -1.23
CHD6-203ENST00000373233 ANAPC4Q9UJX5 808 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 MTMR7Q9Y216 660 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 ZNF804AQ7Z570 1209 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 LARP6Q9BRS8 491 aaKnown RBP7.39□□□□□ -1.23
CHD6-203ENST00000373233 BAIAP2L1Q9UHR4 511 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 IQSEC3Q9UPP2 1182 aaPredicted RBP7.39□□□□□ -1.23
CHD6-203ENST00000373233 STMN1P16949 149 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 MAGEA9P43362 315 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 CXorf56Q9H5V9 222 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 COPRSQ9NQ92 184 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 STAP2Q9UGK3 403 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 CIAO1O76071 339 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 GIMAP6Q6P9H5 292 aa7.39□□□□□ -1.23
CHD6-203ENST00000373233 INTS8Q75QN2 995 aaKnown RBP7.39□□□□□ -1.23
CHD6-203ENST00000373233 PHLDB2Q86SQ0 1253 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms