RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 CCT6AP40227 531 aaKnown RBP13.65□□□□□ -0.22
SNX21-205ENST00000372547 CASP8Q14790 479 aa13.65□□□□□ -0.22
SNX21-205ENST00000372547 NOM1Q5C9Z4 860 aaKnown RBP13.65□□□□□ -0.22
SNX21-205ENST00000372547 NCAPH2Q6IBW4 605 aa13.65□□□□□ -0.22
SNX21-205ENST00000372547 TTLL7Q6ZT98 887 aa13.65□□□□□ -0.22
SNX21-205ENST00000372547 HINFPQ9BQA5 517 aa13.65□□□□□ -0.22
SNX21-205ENST00000372547 ZMYM6O95789 1325 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 ZBTB43O43298 467 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 CDKL5O76039 1030 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 TBC1D10CQ8IV04 446 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 MED15Q96RN5 788 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 MARF1Q9Y4F3 1742 aaKnown RBP13.64□□□□□ -0.23
SNX21-205ENST00000372547 CTAGE15A4D2H0 777 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 IVLP07476 585 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 CTAGE8P0CG41 777 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 GTF2A1P52655 376 aaPredicted RBP13.64□□□□□ -0.23
SNX21-205ENST00000372547 IRX3P78415 501 aaPredicted RBP13.64□□□□□ -0.23
SNX21-205ENST00000372547 TAF7LQ5H9L4 462 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 APOA5Q6Q788 366 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 CTAGE6Q86UF2 777 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 CTAGE4Q8IX94 777 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 STAMQ92783 540 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 XAGE2Q96GT9 111 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 FAM204AQ9H8W3 233 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 PSD3Q9NYI0 1048 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 DACH1Q9UI36 760 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 L1RE1Q9UN81 338 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 AKAP2Q9Y2D5 859 aa13.64□□□□□ -0.23
SNX21-205ENST00000372547 RANBP6O60518 1105 aaKnown RBP13.63□□□□□ -0.23
SNX21-205ENST00000372547 ZNF18P17022 549 aa13.63□□□□□ -0.23
SNX21-205ENST00000372547 NR1I3Q14994 352 aa13.63□□□□□ -0.23
SNX21-205ENST00000372547 RRP12Q5JTH9 1297 aaKnown RBP13.63□□□□□ -0.23
SNX21-205ENST00000372547 MLKLQ8NB16 471 aa13.63□□□□□ -0.23
SNX21-205ENST00000372547 NOA1Q8NC60 698 aaKnown RBP13.63□□□□□ -0.23
SNX21-205ENST00000372547 RABEP2Q9H5N1 569 aa13.63□□□□□ -0.23
SNX21-205ENST00000372547 ATG3Q9NT62 314 aa13.63□□□□□ -0.23
SNX21-205ENST00000372547 IDH1O75874 414 aaKnown RBP13.63□□□□□ -0.23
SNX21-205ENST00000372547 CDC25AP30304 524 aa13.63□□□□□ -0.23
SNX21-205ENST00000372547 GUCY1A2P33402 732 aa13.63□□□□□ -0.23
SNX21-205ENST00000372547 CASP7P55210 303 aa13.63□□□□□ -0.23
SNX21-205ENST00000372547 MDM2Q00987 491 aaPredicted RBP13.63□□□□□ -0.23
SNX21-205ENST00000372547 ARHGEF25Q86VW2 580 aa13.63□□□□□ -0.23
SNX21-205ENST00000372547 ENOX1Q8TC92 643 aaKnown RBP13.63□□□□□ -0.23
SNX21-205ENST00000372547 ZKSCAN3Q9BRR0 538 aa13.63□□□□□ -0.23
SNX21-205ENST00000372547 CWC25Q9NXE8 425 aaPredicted RBP13.63□□□□□ -0.23
SNX21-205ENST00000372547 LRRIQ3A6PVS8 624 aaPredicted RBP13.62□□□□□ -0.23
SNX21-205ENST00000372547 EIF3CLB5ME19 914 aaKnown RBP13.62□□□□□ -0.23
SNX21-205ENST00000372547 CSB-PGBD3P0DP91 1061 aa13.62□□□□□ -0.23
SNX21-205ENST00000372547 NOP2P46087 812 aaKnown RBP13.62□□□□□ -0.23
SNX21-205ENST00000372547 NR5A1Q13285 461 aa13.62□□□□□ -0.23
SNX21-205ENST00000372547 TTC31Q49AM3 519 aaPredicted RBP13.62□□□□□ -0.23
SNX21-205ENST00000372547 TMEM67Q5HYA8 995 aa13.62□□□□□ -0.23
SNX21-205ENST00000372547 DIS3L2Q8IYB7 885 aaKnown RBP13.62□□□□□ -0.23
SNX21-205ENST00000372547 PLBD2Q8NHP8 589 aa13.62□□□□□ -0.23
SNX21-205ENST00000372547 APPBP2Q92624 585 aa13.62□□□□□ -0.23
SNX21-205ENST00000372547 EIF3CQ99613 913 aaKnown RBP13.62□□□□□ -0.23
SNX21-205ENST00000372547 PCDHB6Q9Y5E3 794 aa13.62□□□□□ -0.23
SNX21-205ENST00000372547 LMO7Q8WWI1 1683 aa13.62□□□□□ -0.23
SNX21-205ENST00000372547 ENC1O14682 589 aa13.62□□□□□ -0.23
SNX21-205ENST00000372547 ZMYND10O75800 440 aa13.62□□□□□ -0.23
SNX21-205ENST00000372547 SAFBQ15424 915 aaKnown RBP eCLIP13.62□□□□□ -0.23
SNX21-205ENST00000372547 PACS2Q86VP3 889 aa13.62□□□□□ -0.23
SNX21-205ENST00000372547 UBN2Q6ZU65 1347 aa13.62□□□□□ -0.23
SNX21-205ENST00000372547 MYO1BO43795 1136 aa13.61□□□□□ -0.23
SNX21-205ENST00000372547 SSRP1Q08945 709 aaKnown RBP13.61□□□□□ -0.23
SNX21-205ENST00000372547 CCDC57Q2TAC2 916 aa13.61□□□□□ -0.23
SNX21-205ENST00000372547 LRP10Q7Z4F1 713 aa13.61□□□□□ -0.23
SNX21-205ENST00000372547 NOSTRINQ8IVI9 506 aa13.61□□□□□ -0.23
SNX21-205ENST00000372547 RIN2Q8WYP3 895 aaPredicted RBP13.61□□□□□ -0.23
SNX21-205ENST00000372547 DRC1Q96MC2 740 aa13.61□□□□□ -0.23
SNX21-205ENST00000372547 SLF1Q9BQI6 1058 aa13.61□□□□□ -0.23
SNX21-205ENST00000372547 NBPF3Q9H094 633 aa13.61□□□□□ -0.23
SNX21-205ENST00000372547 EFCC1Q9HA90 598 aa13.61□□□□□ -0.23
SNX21-205ENST00000372547 POTEB2H3BUK9 544 aa13.61□□□□□ -0.23
SNX21-205ENST00000372547 PES1O00541 588 aaKnown RBP13.61□□□□□ -0.23
SNX21-205ENST00000372547 FXR1P51114 621 aaKnown RBP eCLIP13.61□□□□□ -0.23
SNX21-205ENST00000372547 MORC3Q14149 939 aa13.61□□□□□ -0.23
SNX21-205ENST00000372547 FBXL16Q8N461 479 aa13.61□□□□□ -0.23
SNX21-205ENST00000372547 NUP88Q99567 741 aaPredicted RBP13.61□□□□□ -0.23
SNX21-205ENST00000372547 NAPGQ99747 312 aaPredicted RBP13.61□□□□□ -0.23
SNX21-205ENST00000372547 GUCA1BQ9UMX6 200 aa13.61□□□□□ -0.23
SNX21-205ENST00000372547 SH2B2O14492 632 aaPredicted RBP13.6□□□□□ -0.23
SNX21-205ENST00000372547 IFIT3O14879 490 aaKnown RBP13.6□□□□□ -0.23
SNX21-205ENST00000372547 TOB1P50616 345 aaPredicted RBP13.6□□□□□ -0.23
SNX21-205ENST00000372547 LRRC31Q6UY01 552 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 HNRNPLLQ8WVV9 542 aaKnown RBP13.6□□□□□ -0.23
SNX21-205ENST00000372547 CAPZA3Q96KX2 299 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 PANX2Q96RD6 677 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 VPS16Q9H269 839 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.6□□□□□ -0.23
SNX21-205ENST00000372547 TRIM10Q9UDY6 481 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 SLC12A7Q9Y666 1083 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 A0A1B0GTH6 734 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 H7C1W4 665 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 PLCD1P51178 756 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 FILIP1LQ4L180 1135 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 CSRNP2Q9H175 543 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 CABP5Q9NP86 173 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 TFR2Q9UP52 801 aa13.6□□□□□ -0.23
SNX21-205ENST00000372547 SYNRGQ9UMZ2 1314 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms