RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 TRIM34Q9BYJ4 488 aa19.06■□□□□ 0.64
PFDN4-201ENST00000371419 NACAP1Q9BZK3 213 aa19.06■□□□□ 0.64
PFDN4-201ENST00000371419 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.06■□□□□ 0.64
PFDN4-201ENST00000371419 ZNF112Q9UJU3 913 aa19.06■□□□□ 0.64
PFDN4-201ENST00000371419 DDX60LQ5H9U9 1706 aaKnown RBP19.06■□□□□ 0.64
PFDN4-201ENST00000371419 CCDC171Q6TFL3 1326 aa19.06■□□□□ 0.64
PFDN4-201ENST00000371419 PAXIP1Q6ZW49 1069 aaPredicted RBP19.05■□□□□ 0.64
PFDN4-201ENST00000371419 ZNF589Q86UQ0 364 aaPredicted RBP19.05■□□□□ 0.64
PFDN4-201ENST00000371419 METTL16Q86W50 562 aaKnown RBP19.05■□□□□ 0.64
PFDN4-201ENST00000371419 CRACR2BQ8N4Y2 399 aaPredicted RBP19.05■□□□□ 0.64
PFDN4-201ENST00000371419 EHD4Q9H223 541 aa19.05■□□□□ 0.64
PFDN4-201ENST00000371419 USP17L12C9JPN9 530 aa19.04■□□□□ 0.64
PFDN4-201ENST00000371419 USP17L21D6R901 530 aa19.04■□□□□ 0.64
PFDN4-201ENST00000371419 SLURP2P0DP57 97 aa19.04■□□□□ 0.64
PFDN4-201ENST00000371419 TDO2P48775 406 aa19.04■□□□□ 0.64
PFDN4-201ENST00000371419 PLCD1P51178 756 aa19.04■□□□□ 0.64
PFDN4-201ENST00000371419 ZNF157P51786 506 aaPredicted RBP19.04■□□□□ 0.64
PFDN4-201ENST00000371419 PPP4R3CPQ6ZMV5 832 aa19.04■□□□□ 0.64
PFDN4-201ENST00000371419 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.04■□□□□ 0.64
PFDN4-201ENST00000371419 IFNL3Q8IZI9 196 aa19.04■□□□□ 0.64
PFDN4-201ENST00000371419 RUFY2Q8WXA3 655 aa19.04■□□□□ 0.64
PFDN4-201ENST00000371419 EPB41L4AQ9HCS5 686 aaPredicted RBP19.04■□□□□ 0.64
PFDN4-201ENST00000371419 ARPP21Q9UBL0 812 aaPredicted RBP19.04■□□□□ 0.64
PFDN4-201ENST00000371419 SERPINB13Q9UIV8 391 aa19.04■□□□□ 0.64
PFDN4-201ENST00000371419 CSADQ9Y600 493 aa19.04■□□□□ 0.64
PFDN4-201ENST00000371419 CEP350Q5VT06 3117 aa19.04■□□□□ 0.64
PFDN4-201ENST00000371419 BAZ2AQ9UIF9 1905 aaKnown RBP19.04■□□□□ 0.64
PFDN4-201ENST00000371419 FAM196BA6NMK8 535 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 PHF20L1A8MW92 1017 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 CYP2D6P10635 497 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 CTR9Q6PD62 1173 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 SLC10A4Q96EP9 437 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 CLMNQ96JQ2 1002 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 SIPA1L1O43166 1804 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 INPP5BP32019 993 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 ECE1P42892 770 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 VGLL4Q14135 290 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 SBK1Q52WX2 424 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 C12orf60Q5U649 245 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 VPS53Q5VIR6 699 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 CYP4F22Q6NT55 531 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 ZKSCAN4Q969J2 545 aaPredicted RBP19.03■□□□□ 0.64
PFDN4-201ENST00000371419 CCDC102AQ96A19 550 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 NAPBQ9H115 298 aa19.03■□□□□ 0.64
PFDN4-201ENST00000371419 RAD50Q92878 1312 aa19.02■□□□□ 0.64
PFDN4-201ENST00000371419 FOXP2O15409 715 aa19.02■□□□□ 0.63
PFDN4-201ENST00000371419 HSPD1P10809 573 aaKnown RBP19.02■□□□□ 0.63
PFDN4-201ENST00000371419 CAPNS2Q96L46 248 aa19.02■□□□□ 0.63
PFDN4-201ENST00000371419 BACH2Q9BYV9 841 aa19.02■□□□□ 0.63
PFDN4-201ENST00000371419 DNAJC18Q9H819 358 aa19.02■□□□□ 0.63
PFDN4-201ENST00000371419 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.02■□□□□ 0.63
PFDN4-201ENST00000371419 TAOK2Q9UL54 1235 aa19.02■□□□□ 0.63
PFDN4-201ENST00000371419 OTOFQ9HC10 1997 aa19.01■□□□□ 0.63
PFDN4-201ENST00000371419 CYP2D7A0A087X1C5 515 aa19.01■□□□□ 0.63
PFDN4-201ENST00000371419 CTNND1O60716 968 aaKnown RBP19.01■□□□□ 0.63
PFDN4-201ENST00000371419 VEGFBP49765 207 aa19.01■□□□□ 0.63
PFDN4-201ENST00000371419 EVX2Q03828 476 aa19.01■□□□□ 0.63
PFDN4-201ENST00000371419 GABPAQ06546 454 aa19.01■□□□□ 0.63
PFDN4-201ENST00000371419 GRM1Q13255 1194 aa19.01■□□□□ 0.63
PFDN4-201ENST00000371419 RASAL3Q86YV0 1011 aa19.01■□□□□ 0.63
PFDN4-201ENST00000371419 DNAJC5GQ8N7S2 189 aa19.01■□□□□ 0.63
PFDN4-201ENST00000371419 ELP3Q9H9T3 547 aa19.01■□□□□ 0.63
PFDN4-201ENST00000371419 MINDY4BA8MYZ0 360 aa19■□□□□ 0.63
PFDN4-201ENST00000371419 SLC10A3P09131 477 aa19■□□□□ 0.63
PFDN4-201ENST00000371419 ALX1Q15699 326 aa19■□□□□ 0.63
PFDN4-201ENST00000371419 NOL9Q5SY16 702 aaKnown RBP19■□□□□ 0.63
PFDN4-201ENST00000371419 SNCAIPQ9Y6H5 919 aa19■□□□□ 0.63
PFDN4-201ENST00000371419 WDR33Q9C0J8 1336 aaKnown RBP19■□□□□ 0.63
PFDN4-201ENST00000371419 FAM155AB1AL88 458 aaPredicted RBP18.99■□□□□ 0.63
PFDN4-201ENST00000371419 TATDN1Q6P1N9 297 aa18.99■□□□□ 0.63
PFDN4-201ENST00000371419 SCYL3Q8IZE3 742 aa18.99■□□□□ 0.63
PFDN4-201ENST00000371419 IL25Q9H293 177 aa18.99■□□□□ 0.63
PFDN4-201ENST00000371419 SWAP70Q9UH65 585 aa18.99■□□□□ 0.63
PFDN4-201ENST00000371419 SGSM2O43147 1006 aa18.98■□□□□ 0.63
PFDN4-201ENST00000371419 CDC45O75419 566 aa18.98■□□□□ 0.63
PFDN4-201ENST00000371419 FGAP02671 866 aa18.98■□□□□ 0.63
PFDN4-201ENST00000371419 CAP2P40123 477 aa18.98■□□□□ 0.63
PFDN4-201ENST00000371419 NOGQ13253 232 aa18.98■□□□□ 0.63
PFDN4-201ENST00000371419 CASC1Q6TDU7 716 aa18.98■□□□□ 0.63
PFDN4-201ENST00000371419 ERO1BQ86YB8 467 aa18.98■□□□□ 0.63
PFDN4-201ENST00000371419 DYNLL2Q96FJ2 89 aa18.98■□□□□ 0.63
PFDN4-201ENST00000371419 PICK1Q9NRD5 415 aa18.98■□□□□ 0.63
PFDN4-201ENST00000371419 ZMYM6O95789 1325 aa18.98■□□□□ 0.63
PFDN4-201ENST00000371419 SPDYE5A6NIY4 337 aa18.97■□□□□ 0.63
PFDN4-201ENST00000371419 SMIM22K7EJ46 135 aa18.97■□□□□ 0.63
PFDN4-201ENST00000371419 SHMT1P34896 483 aa18.97■□□□□ 0.63
PFDN4-201ENST00000371419 RRP1BQ14684 758 aaKnown RBP18.97■□□□□ 0.63
PFDN4-201ENST00000371419 SPRYD7Q5W111 196 aa18.97■□□□□ 0.63
PFDN4-201ENST00000371419 C16orf86Q6ZW13 317 aa18.97■□□□□ 0.63
PFDN4-201ENST00000371419 OPTNQ96CV9 577 aa18.97■□□□□ 0.63
PFDN4-201ENST00000371419 WNK4Q96J92 1243 aa18.97■□□□□ 0.63
PFDN4-201ENST00000371419 DSCC1Q9BVC3 393 aa18.97■□□□□ 0.63
PFDN4-201ENST00000371419 ZBTB48P10074 688 aaPredicted RBP18.97■□□□□ 0.63
PFDN4-201ENST00000371419 CDK8P49336 464 aa18.97■□□□□ 0.63
PFDN4-201ENST00000371419 PPARAQ07869 468 aa18.97■□□□□ 0.63
PFDN4-201ENST00000371419 CERKLQ49MI3 558 aaPredicted RBP18.97■□□□□ 0.63
PFDN4-201ENST00000371419 SLC44A5Q8NCS7 719 aa18.97■□□□□ 0.63
PFDN4-201ENST00000371419 ESYT1Q9BSJ8 1104 aa18.97■□□□□ 0.63
PFDN4-201ENST00000371419 GINM1Q9NU53 330 aa18.97■□□□□ 0.63
PFDN4-201ENST00000371419 ROBO3Q96MS0 1386 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms