RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 PRKAB2O43741 272 aa16.46■□□□□ 0.23
SSR4-202ENST00000370085 MAP3K10Q02779 954 aa16.46■□□□□ 0.23
SSR4-202ENST00000370085 NOGQ13253 232 aa16.46■□□□□ 0.23
SSR4-202ENST00000370085 CWC27Q6UX04 472 aaKnown RBP16.46■□□□□ 0.23
SSR4-202ENST00000370085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.46■□□□□ 0.232e-7■□□□□ 8.1
SSR4-202ENST00000370085 CAPNS2Q96L46 248 aa16.46■□□□□ 0.23
SSR4-202ENST00000370085 FAM227BQ96M60 508 aa16.46■□□□□ 0.23
SSR4-202ENST00000370085 SEC62Q99442 399 aaKnown RBP16.46■□□□□ 0.23
SSR4-202ENST00000370085 PICK1Q9NRD5 415 aa16.46■□□□□ 0.23
SSR4-202ENST00000370085 BAZ2AQ9UIF9 1905 aaKnown RBP16.45■□□□□ 0.22
SSR4-202ENST00000370085 CEP350Q5VT06 3117 aa16.45■□□□□ 0.22
SSR4-202ENST00000370085 A0A0D9SFI3 127 aa16.45■□□□□ 0.22
SSR4-202ENST00000370085 CTNND1O60716 968 aaKnown RBP16.45■□□□□ 0.22
SSR4-202ENST00000370085 CYP4F22Q6NT55 531 aa16.45■□□□□ 0.22
SSR4-202ENST00000370085 NAPBQ9H115 298 aa16.45■□□□□ 0.22
SSR4-202ENST00000370085 ZNF287Q9HBT7 754 aa16.45■□□□□ 0.22
SSR4-202ENST00000370085 ZNF112Q9UJU3 913 aa16.45■□□□□ 0.22
SSR4-202ENST00000370085 FZD1Q9UP38 647 aa16.45■□□□□ 0.22
SSR4-202ENST00000370085 CCDC171Q6TFL3 1326 aa16.45■□□□□ 0.22
SSR4-202ENST00000370085 RAD50Q92878 1312 aa16.45■□□□□ 0.22
SSR4-202ENST00000370085 WDR33Q9C0J8 1336 aaKnown RBP16.45■□□□□ 0.22
SSR4-202ENST00000370085 GSG1L2A8MUP6 293 aa16.44■□□□□ 0.22
SSR4-202ENST00000370085 USP17L12C9JPN9 530 aa16.44■□□□□ 0.22
SSR4-202ENST00000370085 USP17L21D6R901 530 aa16.44■□□□□ 0.22
SSR4-202ENST00000370085 SLC3A2P08195 630 aaKnown RBP16.44■□□□□ 0.22
SSR4-202ENST00000370085 ZBTB48P10074 688 aaPredicted RBP16.44■□□□□ 0.22
SSR4-202ENST00000370085 MAP2K2P36507 400 aa16.44■□□□□ 0.22
SSR4-202ENST00000370085 VGLL4Q14135 290 aa16.44■□□□□ 0.22
SSR4-202ENST00000370085 SLC4A8Q2Y0W8 1093 aa16.44■□□□□ 0.22
SSR4-202ENST00000370085 METTL16Q86W50 562 aaKnown RBP16.44■□□□□ 0.22
SSR4-202ENST00000370085 REM2Q8IYK8 340 aaPredicted RBP16.44■□□□□ 0.22
SSR4-202ENST00000370085 GINM1Q9NU53 330 aa16.44■□□□□ 0.22
SSR4-202ENST00000370085 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.44■□□□□ 0.22
SSR4-202ENST00000370085 SWAP70Q9UH65 585 aa16.44■□□□□ 0.22
SSR4-202ENST00000370085 DDX60LQ5H9U9 1706 aaKnown RBP16.43■□□□□ 0.22
SSR4-202ENST00000370085 SLC10A3P09131 477 aa16.43■□□□□ 0.22
SSR4-202ENST00000370085 VEGFBP49765 207 aa16.43■□□□□ 0.22
SSR4-202ENST00000370085 SBK1Q52WX2 424 aa16.43■□□□□ 0.22
SSR4-202ENST00000370085 NOL9Q5SY16 702 aaKnown RBP16.43■□□□□ 0.22
SSR4-202ENST00000370085 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.43■□□□□ 0.22
SSR4-202ENST00000370085 ERO1BQ86YB8 467 aa16.43■□□□□ 0.22
SSR4-202ENST00000370085 RASAL3Q86YV0 1011 aa16.43■□□□□ 0.22
SSR4-202ENST00000370085 IFNL3Q8IZI9 196 aa16.43■□□□□ 0.22
SSR4-202ENST00000370085 ZKSCAN4Q969J2 545 aaPredicted RBP16.43■□□□□ 0.22
SSR4-202ENST00000370085 ELP3Q9H9T3 547 aa16.43■□□□□ 0.22
SSR4-202ENST00000370085 OTOFQ9HC10 1997 aa16.43■□□□□ 0.22
SSR4-202ENST00000370085 CHMLP26374 656 aa16.42■□□□□ 0.22
SSR4-202ENST00000370085 INPP5BP32019 993 aa16.42■□□□□ 0.22
SSR4-202ENST00000370085 PLCD1P51178 756 aa16.42■□□□□ 0.22
SSR4-202ENST00000370085 C12orf60Q5U649 245 aa16.42■□□□□ 0.22
SSR4-202ENST00000370085 CTR9Q6PD62 1173 aa16.42■□□□□ 0.22
SSR4-202ENST00000370085 CCDC129Q6ZRS4 1044 aa16.42■□□□□ 0.22
SSR4-202ENST00000370085 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
SSR4-202ENST00000370085 CLMNQ96JQ2 1002 aa16.42■□□□□ 0.22
SSR4-202ENST00000370085 TBC1D2Q9BYX2 928 aa16.42■□□□□ 0.22
SSR4-202ENST00000370085 MYH8P13535 1937 aa16.41■□□□□ 0.22
SSR4-202ENST00000370085 PHF20L1A8MW92 1017 aa16.41■□□□□ 0.22
SSR4-202ENST00000370085 MINDY4BA8MYZ0 360 aa16.41■□□□□ 0.22
SSR4-202ENST00000370085 ASNSP08243 561 aa16.41■□□□□ 0.22
SSR4-202ENST00000370085 CERKLQ49MI3 558 aaPredicted RBP16.41■□□□□ 0.22
SSR4-202ENST00000370085 DNAJC5GQ8N7S2 189 aa16.41■□□□□ 0.22
SSR4-202ENST00000370085 OPTNQ96CV9 577 aa16.41■□□□□ 0.22
SSR4-202ENST00000370085 CABP5Q9NP86 173 aa16.41■□□□□ 0.22
SSR4-202ENST00000370085 DOCK1Q14185 1865 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 SPDYE5A6NIY4 337 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 FAM196BA6NMK8 535 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 HSPD1P10809 573 aaKnown RBP16.4■□□□□ 0.22
SSR4-202ENST00000370085 CAP2P40123 477 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 INHBEP58166 350 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 MAP2K1Q02750 393 aaPredicted RBP16.4■□□□□ 0.22
SSR4-202ENST00000370085 PPATQ06203 517 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 SREBF2Q12772 1141 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 ALX1Q15699 326 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 SPRYD7Q5W111 196 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 KIAA1211Q6ZU35 1233 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 OTUD5Q96G74 571 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 WNK4Q96J92 1243 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 BEGAINQ9BUH8 593 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 AS3MTQ9HBK9 375 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 SNCAIPQ9Y6H5 919 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 LAMB1P07942 1786 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 ZMYM6O95789 1325 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 SIPA1L1O43166 1804 aa16.4■□□□□ 0.22
SSR4-202ENST00000370085 MANSC4A6NHS7 340 aaPredicted RBP16.39■□□□□ 0.21
SSR4-202ENST00000370085 CDC45O75419 566 aa16.39■□□□□ 0.21
SSR4-202ENST00000370085 GTF2A2P52657 109 aa16.39■□□□□ 0.21
SSR4-202ENST00000370085 PDE4BQ07343 736 aa16.39■□□□□ 0.21
SSR4-202ENST00000370085 PPIL2Q13356 520 aa16.39■□□□□ 0.21
SSR4-202ENST00000370085 TATDN1Q6P1N9 297 aa16.39■□□□□ 0.21
SSR4-202ENST00000370085 C16orf86Q6ZW13 317 aa16.39■□□□□ 0.21
SSR4-202ENST00000370085 ZNF589Q86UQ0 364 aaPredicted RBP16.39■□□□□ 0.21
SSR4-202ENST00000370085 SKAP1Q86WV1 359 aa16.39■□□□□ 0.21
SSR4-202ENST00000370085 CCDC17Q96LX7 622 aa16.39■□□□□ 0.21
SSR4-202ENST00000370085 DSCC1Q9BVC3 393 aa16.39■□□□□ 0.21
SSR4-202ENST00000370085 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
SSR4-202ENST00000370085 EPB41L4AQ9HCS5 686 aaPredicted RBP16.39■□□□□ 0.21
SSR4-202ENST00000370085 CTNNA3Q9UI47 895 aa16.39■□□□□ 0.21
SSR4-202ENST00000370085 ATAD5Q96QE3 1844 aa16.38■□□□□ 0.21
SSR4-202ENST00000370085 FAM155AB1AL88 458 aaPredicted RBP16.38■□□□□ 0.21
SSR4-202ENST00000370085 CYP2D6P10635 497 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms