RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CDR2Q01850 454 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 FCHSD1Q86WN1 690 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 SPC25Q9HBM1 224 aa10.3□□□□□ -0.76
VPS13A-203ENST00000360280 C6orf229H3BNL8 230 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 IGSF3O75054 1194 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 STX17P56962 302 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 TBC1D8BQ0IIM8 1120 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 DDX41Q9UJV9 622 aaKnown RBP10.29□□□□□ -0.76
VPS13A-203ENST00000360280 SCINQ9Y6U3 715 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 PEX26Q7Z412 305 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 ESYT1Q9BSJ8 1104 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 CAPS2Q9BXY5 557 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 SLC4A4Q9Y6R1 1079 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 PCF11O94913 1555 aaKnown RBP10.29□□□□□ -0.76
VPS13A-203ENST00000360280 CCDC68Q9H2F9 335 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 EXOC7Q9UPT5 735 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 CARD10Q9BWT7 1032 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.29□□□□□ -0.76
VPS13A-203ENST00000360280 GOLGA8CPA6NN73 597 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 DEUP1Q05D60 604 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 NECAB1Q8N987 351 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 VTI1AQ96AJ9 217 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 TRIM31Q9BZY9 425 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 PFDN6O15212 129 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 C20orf194Q5TEA3 1177 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 RBM8AQ9Y5S9 174 aaKnown RBP10.29□□□□□ -0.76
VPS13A-203ENST00000360280 TRAF5O00463 557 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 NXNQ6DKJ4 435 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 SCHIP1Q9P0W5 487 aaPredicted RBP10.29□□□□□ -0.76
VPS13A-203ENST00000360280 ZNF804AQ7Z570 1209 aa10.29□□□□□ -0.76
VPS13A-203ENST00000360280 CCDC84Q86UT8 332 aaPredicted RBP10.28□□□□□ -0.76
VPS13A-203ENST00000360280 LCA5Q86VQ0 697 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 ZC3H15Q8WU90 426 aaKnown RBP10.28□□□□□ -0.76
VPS13A-203ENST00000360280 LRRC23Q53EV4 343 aaPredicted RBP10.28□□□□□ -0.76
VPS13A-203ENST00000360280 TRIM58Q8NG06 486 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 LRGUKQ96M69 825 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 EFCAB13Q8IY85 973 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 CENPKQ9BS16 269 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 JADE1Q6IE81 842 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 OGFOD1Q8N543 542 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 MMEL1Q495T6 779 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 GOLGA5Q8TBA6 731 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 VGLL3A8MV65 326 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 TNFAIP3P21580 790 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 RSAD2Q8WXG1 361 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 RIC8AQ9NPQ8 531 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.28□□□□□ -0.76
VPS13A-203ENST00000360280 ZNF644Q9H582 1327 aaPredicted RBP10.28□□□□□ -0.76
VPS13A-203ENST00000360280 IFIH1Q9BYX4 1025 aaKnown RBP10.28□□□□□ -0.76
VPS13A-203ENST00000360280 CTTNBP2Q8WZ74 1663 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 PAG1Q9NWQ8 432 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 GLT8D2Q9H1C3 349 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 VWA3AA6NCI4 1184 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 RNASELQ05823 741 aaKnown RBP10.28□□□□□ -0.76
VPS13A-203ENST00000360280 PAK1Q13153 545 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 DCUN1D2Q6PH85 259 aa10.28□□□□□ -0.76
VPS13A-203ENST00000360280 NUTM2BA6NNL0 878 aaPredicted RBP10.27□□□□□ -0.76
VPS13A-203ENST00000360280 NUTM2EB1AL46 878 aaPredicted RBP10.27□□□□□ -0.76
VPS13A-203ENST00000360280 CHMP2AO43633 222 aa10.27□□□□□ -0.76
VPS13A-203ENST00000360280 TRIM56Q9BRZ2 755 aaKnown RBP10.27□□□□□ -0.76
VPS13A-203ENST00000360280 PPP2R5DQ14738 602 aa10.27□□□□□ -0.76
VPS13A-203ENST00000360280 MGARPQ8TDB4 240 aa10.27□□□□□ -0.76
VPS13A-203ENST00000360280 RABEP2Q9H5N1 569 aa10.27□□□□□ -0.76
VPS13A-203ENST00000360280 PPWD1Q96BP3 646 aaKnown RBP10.27□□□□□ -0.76
VPS13A-203ENST00000360280 GSTA1P08263 222 aa10.27□□□□□ -0.76
VPS13A-203ENST00000360280 GSTA2P09210 222 aa10.27□□□□□ -0.76
VPS13A-203ENST00000360280 SDSP20132 328 aa10.27□□□□□ -0.76
VPS13A-203ENST00000360280 PPP2R5CQ13362 524 aa10.27□□□□□ -0.76
VPS13A-203ENST00000360280 VEZTQ9HBM0 779 aa10.27□□□□□ -0.76
VPS13A-203ENST00000360280 VPS37BQ9H9H4 285 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 RBM26Q5T8P6 1007 aaKnown RBP10.27□□□□□ -0.77
VPS13A-203ENST00000360280 ZBTB9Q96C00 473 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 SAR1BQ9Y6B6 198 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 KDM5AP29375 1690 aaKnown RBP10.27□□□□□ -0.77
VPS13A-203ENST00000360280 CLTAP09496 248 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 FBXO41Q8TF61 875 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 AK9Q5TCS8 1911 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 TEKT1Q969V4 418 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 SH2D4AQ9H788 454 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 PLS1Q14651 629 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 RPS6KA1Q15418 735 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 NUB1Q9Y5A7 615 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 MAN1A1P33908 653 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 TMED1Q13445 227 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 NACA2Q9H009 215 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 ARHGAP45Q92619 1136 aa10.27□□□□□ -0.77
VPS13A-203ENST00000360280 BAG2O95816 211 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 RAD51AP2Q09MP3 1159 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 STRN3Q13033 797 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 MPRIPQ6WCQ1 1025 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 CCDC13Q8IYE1 715 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 NESP48681 1621 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 AKNAD1Q5T1N1 836 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 SCOCQ9UIL1 159 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 BIRC2Q13490 618 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 CEP104O60308 925 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 PTPDC1A2A3K4 754 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 ATICP31939 592 aa10.26□□□□□ -0.77
VPS13A-203ENST00000360280 RSBN1LQ6PCB5 846 aaPredicted RBP10.26□□□□□ -0.77
VPS13A-203ENST00000360280 KMT5BQ4FZB7 885 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms