RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 SDSP20132 328 aa10.68□□□□□ -0.7
SMARCAL1-202ENST00000358207 ATP2B2Q01814 1243 aa10.68□□□□□ -0.7
SMARCAL1-202ENST00000358207 PPP1R42Q7Z4L9 355 aa10.68□□□□□ -0.7
SMARCAL1-202ENST00000358207 KIRREL3Q8IZU9 778 aa10.68□□□□□ -0.7
SMARCAL1-202ENST00000358207 CNNM3Q8NE01 707 aa10.68□□□□□ -0.7
SMARCAL1-202ENST00000358207 KINO60870 393 aaKnown RBP10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 BEND3Q5T5X7 828 aa10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 BAG1Q99933 345 aaPredicted RBP10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 DDX21Q9NR30 783 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 DNAI1Q9UI46 699 aa10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 DTNBO60941 627 aa10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 STARD3NLO95772 234 aa10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 DNM1Q05193 864 aaKnown RBP10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 MCM6Q14566 821 aa10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 CRYMQ14894 314 aa10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 PREPLQ4J6C6 727 aaPredicted RBP10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 SOGA3Q5TF21 947 aa10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 UBE3BQ7Z3V4 1068 aa10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 NUTM1Q86Y26 1132 aa10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 ANKRD44Q8N8A2 993 aa10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 MICAL1Q8TDZ2 1067 aa10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 PARD3BQ8TEW8 1205 aa10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 DNAJC25Q9H1X3 360 aa10.67□□□□□ -0.7
SMARCAL1-202ENST00000358207 ERC2O15083 957 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 TOMM70O94826 608 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 CAMTA2O94983 1202 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 DALRD3Q5D0E6 543 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 ANKRD13DQ6ZTN6 518 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 SYNE4Q8N205 404 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 SH3GL3Q99963 347 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 BRIP1Q9BX63 1249 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 CPSF2Q9P2I0 782 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 TBC1D2BQ9UPU7 963 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 FRMD3A2A2Y4 597 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 ANKRD18BA2A2Z9 1011 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 IGKV5-2P06315 115 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 PDE6BP35913 854 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 MCM2P49736 904 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 ZNF165P49910 485 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 NFIXQ14938 502 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 CCDC96Q2M329 555 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 KSR2Q6VAB6 950 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 GPR161Q8N6U8 529 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 ODF2LQ9ULJ1 636 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 URI1O94763 535 aaPredicted RBP10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 IFIT2P09913 472 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 RPS6KA3P51812 740 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 ETF1P62495 437 aaKnown RBP10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 TRIM65Q6PJ69 517 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 TRIM74Q86UV6 250 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 TRIM73Q86UV7 250 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 KLHL23Q8NBE8 558 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 MRFAP1L1Q96HT8 127 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 NUP62CLQ9H1M0 184 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 KIF9Q9HAQ2 790 aa10.66□□□□□ -0.7
SMARCAL1-202ENST00000358207 MYO1FO00160 1098 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 PHACTR2O75167 634 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 F13A1P00488 732 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 IBSPP21815 317 aaPredicted RBP10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 NF2P35240 595 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 MRPL12P52815 198 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 ERCC4Q92889 916 aaPredicted RBP10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 SUGCTQ9HAC7 445 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 HYPKQ9NX55 129 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 FAM169AQ9Y6X4 670 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 A0A1B0GUL6 1792 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 SYT1P21579 422 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 RWDD2BP57060 319 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 EPHA10Q5JZY3 1008 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 VPS53Q5VIR6 699 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 RSRC2Q7L4I2 434 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 ARMC2Q8NEN0 867 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 PAIP2Q9BPZ3 127 aaKnown RBP10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 GPBP1L1Q9HC44 474 aaPredicted RBP10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 ZBTB1Q9Y2K1 713 aa10.65□□□□□ -0.7
SMARCAL1-202ENST00000358207 LRRFIP1Q32MZ4 808 aaKnown RBP10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 SARM1Q6SZW1 724 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 CASC1Q6TDU7 716 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 SUCLG2Q96I99 432 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 UPF3BQ9BZI7 483 aaKnown RBP10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 ERVV-1B6SEH8 477 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 ZPR1O75312 459 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 ECEL1O95672 775 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 TRAF1Q13077 416 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 IQCB1Q15051 598 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 WWC2Q6AWC2 1192 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 CABS1Q96KC9 395 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 STX6O43752 255 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 FNTAP49354 379 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 BEND6Q5SZJ8 279 aaPredicted RBP10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 WLSQ5T9L3 541 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 VPS33BQ9H267 617 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 DCTPP1Q9H773 170 aa10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 SPATS2LQ9NUQ6 558 aaKnown RBP10.64□□□□□ -0.71
SMARCAL1-202ENST00000358207 PHLPP2Q6ZVD8 1323 aa10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 DDX58O95786 925 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 NEXNQ0ZGT2 675 aa10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 GNL2Q13823 731 aaKnown RBP10.63□□□□□ -0.71
SMARCAL1-202ENST00000358207 USPL1Q5W0Q7 1092 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms