RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 GRAMD1AQ96CP6 724 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 PLEKHG3A1L390 1219 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 AKR1B10O60218 316 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 TTC39AQ5SRH9 613 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 C16orf71Q8IYS4 520 aaPredicted RBP4.6□□□□□ -1.67
SYNE2-204ENST00000358025 WDR66Q8TBY9 1149 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 IL1RAPL2Q9NP60 686 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 SLC9C1Q4G0N8 1177 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 ZNF713Q8N859 430 aaPredicted RBP4.6□□□□□ -1.67
SYNE2-204ENST00000358025 SETBP1Q9Y6X0 1596 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 PLB1Q6P1J6 1458 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 ARL6IP4Q66PJ3 421 aaKnown RBP4.6□□□□□ -1.67
SYNE2-204ENST00000358025 JADE2Q9NQC1 790 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 EXOC1Q9NV70 894 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 AP1ARQ63HQ0 302 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 CEP57Q86XR8 500 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 ABTB2Q8N961 1025 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 RRP36Q96EU6 259 aaKnown RBP4.6□□□□□ -1.67
SYNE2-204ENST00000358025 AK8Q96MA6 479 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 EPB41P11171 864 aaKnown RBP4.6□□□□□ -1.67
SYNE2-204ENST00000358025 RIPPLY1Q0D2K3 151 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 MFSD6Q6ZSS7 791 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 SMC1BQ8NDV3 1235 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 THUMPD2Q9BTF0 503 aaKnown RBP4.6□□□□□ -1.67
SYNE2-204ENST00000358025 BOLA2Q9H3K6 86 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 MRFAP1Q9Y605 127 aa4.6□□□□□ -1.67
SYNE2-204ENST00000358025 IFIT1P09914 478 aaKnown RBP4.59□□□□□ -1.67
SYNE2-204ENST00000358025 KRT9P35527 623 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 PDCD2Q16342 344 aaPredicted RBP4.59□□□□□ -1.67
SYNE2-204ENST00000358025 RCSD1Q6JBY9 416 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 VPS37DQ86XT2 251 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 NFE2L3Q9Y4A8 694 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 CPP00450 1065 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 TEX11Q8IYF3 940 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 FBF1Q8TES7 1133 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 RBM42Q9BTD8 480 aaKnown RBP4.59□□□□□ -1.67
SYNE2-204ENST00000358025 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.59□□□□□ -1.67
SYNE2-204ENST00000358025 ATP7BP35670 1465 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 AARSP49588 968 aaKnown RBP eCLIP4.59□□□□□ -1.67
SYNE2-204ENST00000358025 RNF187Q5TA31 235 aaPredicted RBP4.59□□□□□ -1.67
SYNE2-204ENST00000358025 LINC00301Q8NCQ3 95 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 PPP1R12AO14974 1030 aaPredicted RBP4.59□□□□□ -1.67
SYNE2-204ENST00000358025 DESP17661 470 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 ZNF131P52739 623 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 TBC1D8BQ0IIM8 1120 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 OSBPL9Q96SU4 736 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 METAP2P50579 478 aaKnown RBP eCLIP4.59□□□□□ -1.67
SYNE2-204ENST00000358025 ME3Q16798 604 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 CNNM4Q6P4Q7 775 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 FERMT1Q9BQL6 677 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 PAK1Q13153 545 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 CASP8Q14790 479 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 TTLL7Q6ZT98 887 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 ESR2Q92731 530 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 PI4KAP2A4QPH2 592 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 PDE6CP51160 858 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 USPL1Q5W0Q7 1092 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 CC2D1AQ6P1N0 951 aaPredicted RBP4.59□□□□□ -1.67
SYNE2-204ENST00000358025 WDR93Q6P2C0 686 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 PI4KAP1Q8N8J0 262 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 APPBP2Q92624 585 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 ZDHHC9Q9Y397 364 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 CLNS1AP54105 237 aaKnown RBP4.59□□□□□ -1.67
SYNE2-204ENST00000358025 CCDC96Q2M329 555 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 HSP90AA5PQ58FG0 334 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 ATRIPQ8WXE1 791 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 PPP1R12CQ9BZL4 782 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 SATB1Q01826 763 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 PHLDB2Q86SQ0 1253 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 CEP85LQ5SZL2 805 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 DEXIO95424 95 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 CCDC174Q6PII3 467 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 TSPYL6Q8N831 410 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 CFAP61Q8NHU2 1237 aa4.59□□□□□ -1.67
SYNE2-204ENST00000358025 XPO4Q9C0E2 1151 aaKnown RBP4.59□□□□□ -1.67
SYNE2-204ENST00000358025 RPL26L1Q9UNX3 145 aaKnown RBP4.59□□□□□ -1.67
SYNE2-204ENST00000358025 GMNCA6NCL1 334 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 ATP2A1O14983 1001 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 CCDC122Q5T0U0 273 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 NAPBQ9H115 298 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 HIP1RO75146 1068 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 IBSPP21815 317 aaPredicted RBP4.59□□□□□ -1.68
SYNE2-204ENST00000358025 EEF1GP26641 437 aaKnown RBP4.59□□□□□ -1.68
SYNE2-204ENST00000358025 IRX5P78411 483 aaPredicted RBP4.59□□□□□ -1.68
SYNE2-204ENST00000358025 C6orf118Q5T5N4 469 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 TRIM6Q9C030 488 aaPredicted RBP4.59□□□□□ -1.68
SYNE2-204ENST00000358025 KDM4CQ9H3R0 1056 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 KMT5BQ4FZB7 885 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 RAB21Q9UL25 225 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 IFIT3O14879 490 aaKnown RBP4.59□□□□□ -1.68
SYNE2-204ENST00000358025 GSTA1P08263 222 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 MYSM1Q5VVJ2 828 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 ZNF530Q6P9A1 599 aaPredicted RBP4.59□□□□□ -1.68
SYNE2-204ENST00000358025 BCAS4Q8TDM0 211 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 LCMT1Q9UIC8 334 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 GNA11P29992 359 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 RWDD2BP57060 319 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 PPP1R21Q6ZMI0 780 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 UBE3BQ7Z3V4 1068 aa4.59□□□□□ -1.68
SYNE2-204ENST00000358025 STK11IPQ8N1F8 1099 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms