RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 PRDM15P57071 1507 aaPredicted RBP9.9□□□□□ -0.82
UBE2D3-204ENST00000349311 RPRD2Q5VT52 1461 aaKnown RBP9.9□□□□□ -0.83
UBE2D3-204ENST00000349311 ABCA6Q8N139 1617 aa9.89□□□□□ -0.83
UBE2D3-204ENST00000349311 ANKRD30BQ9BXX2 1392 aa9.89□□□□□ -0.83
UBE2D3-204ENST00000349311 F8W735 103 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-204ENST00000349311 CTSHP09668 335 aa9.89□□□□□ -0.83
UBE2D3-204ENST00000349311 USP17L7P0C7H9 530 aa9.89□□□□□ -0.83
UBE2D3-204ENST00000349311 EIF4BP23588 611 aaKnown RBP9.89□□□□□ -0.83
UBE2D3-204ENST00000349311 KIAA1211Q6ZU35 1233 aa9.89□□□□□ -0.83
UBE2D3-204ENST00000349311 SLC7A3Q8WY07 619 aa9.89□□□□□ -0.83
UBE2D3-204ENST00000349311 SSBP4Q9BWG4 385 aaPredicted RBP9.89□□□□□ -0.83
UBE2D3-204ENST00000349311 MROH1Q8NDA8 1641 aa9.89□□□□□ -0.83
UBE2D3-204ENST00000349311 REREQ9P2R6 1566 aa9.88□□□□□ -0.83
UBE2D3-204ENST00000349311 RRP9O43818 475 aaKnown RBP9.88□□□□□ -0.83
UBE2D3-204ENST00000349311 MRPL58Q14197 206 aaKnown RBP9.88□□□□□ -0.83
UBE2D3-204ENST00000349311 CCDC184Q52MB2 194 aa9.88□□□□□ -0.83
UBE2D3-204ENST00000349311 L1TD1Q5T7N2 865 aaKnown RBP9.88□□□□□ -0.83
UBE2D3-204ENST00000349311 GIPC2Q8TF65 315 aa9.88□□□□□ -0.83
UBE2D3-204ENST00000349311 NECAB3Q96P71 396 aaPredicted RBP9.88□□□□□ -0.83
UBE2D3-204ENST00000349311 SPHKAPQ2M3C7 1700 aa9.87□□□□□ -0.83
UBE2D3-204ENST00000349311 E9PCH4 1651 aa9.87□□□□□ -0.83
UBE2D3-204ENST00000349311 ATP10AO60312 1499 aa9.87□□□□□ -0.83
UBE2D3-204ENST00000349311 MEGF11A6BM72 1044 aa9.87□□□□□ -0.83
UBE2D3-204ENST00000349311 DIP2CQ9Y2E4 1556 aa9.87□□□□□ -0.83
UBE2D3-204ENST00000349311 ZC3H13Q5T200 1668 aaKnown RBP9.87□□□□□ -0.83
UBE2D3-204ENST00000349311 LOC100289279A0A1B0GTE1 492 aa9.86□□□□□ -0.83
UBE2D3-204ENST00000349311 DLGAP3O95886 979 aa9.86□□□□□ -0.83
UBE2D3-204ENST00000349311 NOS3P29474 1203 aa9.86□□□□□ -0.83
UBE2D3-204ENST00000349311 DZIP1LQ8IYY4 767 aaKnown RBP9.86□□□□□ -0.83
UBE2D3-204ENST00000349311 UBASH3BQ8TF42 649 aa9.86□□□□□ -0.83
UBE2D3-204ENST00000349311 WFDC12Q8WWY7 111 aa9.86□□□□□ -0.83
UBE2D3-204ENST00000349311 FAM161BQ96MY7 647 aa9.86□□□□□ -0.83
UBE2D3-204ENST00000349311 LMTK2Q8IWU2 1503 aa9.86□□□□□ -0.83
UBE2D3-204ENST00000349311 NUP155O75694 1391 aa9.86□□□□□ -0.83
UBE2D3-204ENST00000349311 USP31Q70CQ4 1352 aa9.86□□□□□ -0.83
UBE2D3-204ENST00000349311 DHX29Q7Z478 1369 aaKnown RBP9.86□□□□□ -0.83
UBE2D3-204ENST00000349311 CEP152O94986 1710 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 ENC1O14682 589 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 IGHA1P01876 353 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 CTSBP07858 339 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 RRP1P56182 461 aaKnown RBP9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 XPCQ01831 940 aaPredicted RBP9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 GSTM4Q03013 218 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 PSMD2Q13200 908 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 ZNF326Q5BKZ1 582 aaKnown RBP9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 PDZD3Q86UT5 571 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 TXNRD3Q86VQ6 643 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 AFAP1Q8N556 730 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 SPOCK3Q9BQ16 436 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 TMPRSS13Q9BYE2 586 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 AKTIPQ9H8T0 292 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 TMEM39AQ9NV64 488 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 AKAP2Q9Y2D5 859 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 A2MP01023 1474 aa9.85□□□□□ -0.83
UBE2D3-204ENST00000349311 NEURL4Q96JN8 1562 aa9.84□□□□□ -0.83
UBE2D3-204ENST00000349311 HSP90AA1P07900 732 aaKnown RBP9.84□□□□□ -0.83
UBE2D3-204ENST00000349311 NLRP12P59046 1061 aa9.84□□□□□ -0.83
UBE2D3-204ENST00000349311 DUOXA2Q1HG44 320 aa9.84□□□□□ -0.83
UBE2D3-204ENST00000349311 LDLRAD1Q5T700 205 aa9.84□□□□□ -0.83
UBE2D3-204ENST00000349311 CACNA2D2Q9NY47 1150 aa9.84□□□□□ -0.83
UBE2D3-204ENST00000349311 USP21Q9UK80 565 aa9.84□□□□□ -0.83
UBE2D3-204ENST00000349311 CCDC9Q9Y3X0 531 aaKnown RBP9.84□□□□□ -0.83
UBE2D3-204ENST00000349311 SORBS3O60504 671 aa9.83□□□□□ -0.84
UBE2D3-204ENST00000349311 CYP11A1P05108 521 aa9.83□□□□□ -0.84
UBE2D3-204ENST00000349311 AP3B2Q13367 1082 aa9.83□□□□□ -0.84
UBE2D3-204ENST00000349311 HSP90AA2PQ14568 343 aaPredicted RBP9.83□□□□□ -0.84
UBE2D3-204ENST00000349311 ALX3O95076 343 aa9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 ECEL1O95672 775 aa9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 BMP6P22004 513 aa9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 GATA4P43694 442 aa9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 ST13P50502 369 aaKnown RBP9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 POU4F3Q15319 338 aa9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 DDX54Q8TDD1 881 aaKnown RBP9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 STK35Q8TDR2 534 aa9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 CEP44Q9C0F1 390 aa9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 SUGCTQ9HAC7 445 aa9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 PODXL2Q9NZ53 605 aa9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 KIF1BO60333 1816 aa9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 EFCAB6Q5THR3 1501 aa9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 SYNGAP1Q96PV0 1343 aa9.82□□□□□ -0.84
UBE2D3-204ENST00000349311 KTN1Q86UP2 1357 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-204ENST00000349311 IREB2P48200 963 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-204ENST00000349311 ZNF157P51786 506 aaPredicted RBP9.81□□□□□ -0.84
UBE2D3-204ENST00000349311 ZNF252P-AS1Q0IIN9 211 aa9.81□□□□□ -0.84
UBE2D3-204ENST00000349311 EXOSC6Q5RKV6 272 aaKnown RBP9.81□□□□□ -0.84
UBE2D3-204ENST00000349311 ACAD11Q709F0 780 aa9.81□□□□□ -0.84
UBE2D3-204ENST00000349311 AGGF1Q8N302 714 aaeCLIP9.81□□□□□ -0.84
UBE2D3-204ENST00000349311 CRELD1Q96HD1 420 aa9.81□□□□□ -0.84
UBE2D3-204ENST00000349311 MEGF10Q96KG7 1140 aa9.81□□□□□ -0.84
UBE2D3-204ENST00000349311 TRPM2O94759 1503 aa9.81□□□□□ -0.84
UBE2D3-204ENST00000349311 AGLP35573 1532 aa9.81□□□□□ -0.84
UBE2D3-204ENST00000349311 ARID4BQ4LE39 1312 aaPredicted RBP9.81□□□□□ -0.84
UBE2D3-204ENST00000349311 MSTNO14793 375 aa9.8□□□□□ -0.84
UBE2D3-204ENST00000349311 NME2P22392 152 aa9.8□□□□□ -0.84
UBE2D3-204ENST00000349311 MAOBP27338 520 aa9.8□□□□□ -0.84
UBE2D3-204ENST00000349311 PPP2R3AQ06190 1150 aa9.8□□□□□ -0.84
UBE2D3-204ENST00000349311 TPTE2Q6XPS3 522 aa9.8□□□□□ -0.84
UBE2D3-204ENST00000349311 SV2BQ7L1I2 683 aa9.8□□□□□ -0.84
UBE2D3-204ENST00000349311 SMG8Q8ND04 991 aaKnown RBP9.8□□□□□ -0.84
UBE2D3-204ENST00000349311 RNF208Q9H0X6 261 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms