RNA–Protein interactions for RNA: ENST00000340954.11

STAU1-201, Transcript of staufen double-stranded RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene STAU1, Length 3,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAU1-201ENST00000340954 SART3Q15020 963 aaKnown RBP12.25□□□□□ -0.45
STAU1-201ENST00000340954 DIXDC1Q155Q3 683 aa12.25□□□□□ -0.45
STAU1-201ENST00000340954 DZIP1Q86YF9 867 aaKnown RBP12.25□□□□□ -0.45
STAU1-201ENST00000340954 FBXO18Q8NFZ0 1043 aa12.25□□□□□ -0.45
STAU1-201ENST00000340954 IGDCC4Q8TDY8 1250 aa12.25□□□□□ -0.45
STAU1-201ENST00000340954 NYXQ9GZU5 481 aa12.25□□□□□ -0.45
STAU1-201ENST00000340954 LY9Q9HBG7 655 aa12.25□□□□□ -0.45
STAU1-201ENST00000340954 ZNF219Q9P2Y4 722 aaPredicted RBP12.25□□□□□ -0.45
STAU1-201ENST00000340954 SF3B3Q15393 1217 aaKnown RBP12.25□□□□□ -0.45
STAU1-201ENST00000340954 CREBRFQ8IUR6 639 aa12.25□□□□□ -0.45
STAU1-201ENST00000340954 FNBP4Q8N3X1 1017 aaPredicted RBP12.25□□□□□ -0.45
STAU1-201ENST00000340954 PCDHA7Q9UN72 937 aa12.25□□□□□ -0.45
STAU1-201ENST00000340954 MMP14P50281 582 aa12.24□□□□□ -0.45
STAU1-201ENST00000340954 UBE4AQ14139 1066 aa12.24□□□□□ -0.45
STAU1-201ENST00000340954 KRT40Q6A162 431 aa12.24□□□□□ -0.45
STAU1-201ENST00000340954 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.24□□□□□ -0.45
STAU1-201ENST00000340954 RPGRQ92834 1020 aaKnown RBP12.24□□□□□ -0.45
STAU1-201ENST00000340954 TMX4Q9H1E5 349 aaPredicted RBP12.24□□□□□ -0.45
STAU1-201ENST00000340954 ZNF804BA4D1E1 1349 aa12.24□□□□□ -0.45
STAU1-201ENST00000340954 F8W031 263 aaPredicted RBP12.24□□□□□ -0.45
STAU1-201ENST00000340954 AP5Z1O43299 807 aa12.24□□□□□ -0.45
STAU1-201ENST00000340954 TTC36A6NLP5 189 aa12.24□□□□□ -0.45
STAU1-201ENST00000340954 RIMBP2O15034 1052 aa12.24□□□□□ -0.45
STAU1-201ENST00000340954 ZRSR1Q15695 479 aaKnown RBP12.24□□□□□ -0.45
STAU1-201ENST00000340954 MRVI1Q9Y6F6 885 aa12.24□□□□□ -0.45
STAU1-201ENST00000340954 BAZ2BQ9UIF8 2168 aaKnown RBP12.24□□□□□ -0.45
STAU1-201ENST00000340954 TESPA1A2RU30 521 aaPredicted RBP12.23□□□□□ -0.45
STAU1-201ENST00000340954 ZNF165P49910 485 aa12.23□□□□□ -0.45
STAU1-201ENST00000340954 SSRP1Q08945 709 aaKnown RBP12.23□□□□□ -0.45
STAU1-201ENST00000340954 TRIM5Q9C035 493 aa12.23□□□□□ -0.45
STAU1-201ENST00000340954 KRT23Q9C075 422 aa12.23□□□□□ -0.45
STAU1-201ENST00000340954 MCM9Q9NXL9 1143 aa12.23□□□□□ -0.45
STAU1-201ENST00000340954 RTN1Q16799 776 aa12.23□□□□□ -0.45
STAU1-201ENST00000340954 MYSM1Q5VVJ2 828 aa12.23□□□□□ -0.45
STAU1-201ENST00000340954 ZNF384Q8TF68 577 aa12.23□□□□□ -0.45
STAU1-201ENST00000340954 CLIC6Q96NY7 704 aa12.23□□□□□ -0.45
STAU1-201ENST00000340954 SAP30BPQ9UHR5 308 aaKnown RBP12.23□□□□□ -0.45
STAU1-201ENST00000340954 BTBD18B2RXH4 712 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 C6orf229H3BNL8 230 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 NDUFA8P51970 172 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 OLFM4Q6UX06 510 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 TSHZ1Q6ZSZ6 1077 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 VTI1AQ96AJ9 217 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 TNKSO95271 1327 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 ZMYM6O95789 1325 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 ELP1O95163 1332 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 SALL1Q9NSC2 1324 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 SPTLC2O15270 562 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 OFD1O75665 1012 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 GRIK5Q16478 980 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 TMEM87BQ96K49 555 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 CLSTN2Q9H4D0 955 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 CBX8Q9HC52 389 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 DDX19AQ9NUU7 478 aaKnown RBP12.22□□□□□ -0.45
STAU1-201ENST00000340954 AKAP11Q9UKA4 1901 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 CNTNAP4Q9C0A0 1308 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 USP17L8P0C7I0 530 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 PAX3P23760 479 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 USP5P45974 858 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 AKAP17AQ02040 695 aaKnown RBP12.22□□□□□ -0.45
STAU1-201ENST00000340954 NR5A1Q13285 461 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 MSL1Q68DK7 614 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 ZBTB12Q9Y330 459 aaPredicted RBP12.22□□□□□ -0.45
STAU1-201ENST00000340954 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.22□□□□□ -0.459e-7■■■■□ 22
STAU1-201ENST00000340954 MYH3P11055 1940 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 SPEF2Q9C093 1822 aa12.22□□□□□ -0.45
STAU1-201ENST00000340954 KIF23Q02241 960 aaPredicted RBP12.21□□□□□ -0.45
STAU1-201ENST00000340954 ZC3H15Q8WU90 426 aaKnown RBP12.21□□□□□ -0.45
STAU1-201ENST00000340954 DYNLL2Q96FJ2 89 aa12.21□□□□□ -0.45
STAU1-201ENST00000340954 CNNM2Q9H8M5 875 aa12.21□□□□□ -0.45
STAU1-201ENST00000340954 CCDC39Q9UFE4 941 aa12.21□□□□□ -0.45
STAU1-201ENST00000340954 RCOR1Q9UKL0 485 aa12.21□□□□□ -0.45
STAU1-201ENST00000340954 BECN2A8MW95 431 aa12.21□□□□□ -0.45
STAU1-201ENST00000340954 CDKL5O76039 1030 aa12.21□□□□□ -0.45
STAU1-201ENST00000340954 UFL1O94874 794 aa12.21□□□□□ -0.45
STAU1-201ENST00000340954 GNAT2P19087 354 aa12.21□□□□□ -0.45
STAU1-201ENST00000340954 IFIT1BQ5T764 474 aaKnown RBP12.21□□□□□ -0.45
STAU1-201ENST00000340954 TRIM22Q8IYM9 498 aa12.21□□□□□ -0.45
STAU1-201ENST00000340954 ZNF654Q8IZM8 581 aa12.21□□□□□ -0.45
STAU1-201ENST00000340954 PDILTQ8N807 584 aa12.21□□□□□ -0.45
STAU1-201ENST00000340954 ESR2Q92731 530 aa12.21□□□□□ -0.45
STAU1-201ENST00000340954 LAMA4Q16363 1823 aa12.21□□□□□ -0.46
STAU1-201ENST00000340954 NBPF11Q86T75 865 aa12.21□□□□□ -0.46
STAU1-201ENST00000340954 NSUN4Q96CB9 384 aaKnown RBP12.21□□□□□ -0.46
STAU1-201ENST00000340954 PDLIM2Q96JY6 352 aa12.21□□□□□ -0.46
STAU1-201ENST00000340954 FAM217BQ9NTX9 383 aaPredicted RBP12.21□□□□□ -0.46
STAU1-201ENST00000340954 VPS54Q9P1Q0 977 aa12.21□□□□□ -0.46
STAU1-201ENST00000340954 SRCAPQ6ZRS2 3230 aa12.2□□□□□ -0.46
STAU1-201ENST00000340954 TSPY2A6NKD2 308 aa12.2□□□□□ -0.46
STAU1-201ENST00000340954 GOLGA6L19H0YKK7 550 aa12.2□□□□□ -0.46
STAU1-201ENST00000340954 SERPINB2P05120 415 aa12.2□□□□□ -0.46
STAU1-201ENST00000340954 HSP90AA4PQ58FG1 418 aa12.2□□□□□ -0.46
STAU1-201ENST00000340954 C11orf57Q6ZUT1 292 aaPredicted RBP12.2□□□□□ -0.46
STAU1-201ENST00000340954 LINC00301Q8NCQ3 95 aa12.2□□□□□ -0.46
STAU1-201ENST00000340954 FAM200AQ8TCP9 573 aa12.2□□□□□ -0.46
STAU1-201ENST00000340954 RIOK1Q9BRS2 568 aaKnown RBP12.2□□□□□ -0.46
STAU1-201ENST00000340954 FUCA2Q9BTY2 467 aa12.2□□□□□ -0.46
STAU1-201ENST00000340954 V9GY48 417 aaPredicted RBP12.2□□□□□ -0.46
STAU1-201ENST00000340954 UQCRHLA0A096LP55 91 aa12.2□□□□□ -0.46
STAU1-201ENST00000340954 UQCRHP07919 91 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms