RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 SIL1Q9H173 461 aa20.45■□□□□ 0.86
NECTIN1-202ENST00000340882 ASCC2Q9H1I8 757 aaPredicted RBP20.45■□□□□ 0.86
NECTIN1-202ENST00000340882 PNMA3Q9UL41 463 aa20.45■□□□□ 0.86
NECTIN1-202ENST00000340882 SPTBN5Q9NRC6 3674 aaKnown RBP20.45■□□□□ 0.86
NECTIN1-202ENST00000340882 PRUNE2Q8WUY3 3088 aa20.44■□□□□ 0.86
NECTIN1-202ENST00000340882 CYP2B6P20813 491 aa20.44■□□□□ 0.86
NECTIN1-202ENST00000340882 ADORA1P30542 326 aa20.44■□□□□ 0.86
NECTIN1-202ENST00000340882 HMGCS2P54868 508 aa20.44■□□□□ 0.86
NECTIN1-202ENST00000340882 MDM2Q00987 491 aaPredicted RBP20.44■□□□□ 0.86
NECTIN1-202ENST00000340882 MRPL50Q8N5N7 158 aaKnown RBP20.44■□□□□ 0.86
NECTIN1-202ENST00000340882 DENND2AQ9ULE3 1009 aa20.44■□□□□ 0.86
NECTIN1-202ENST00000340882 POTEB2H3BUK9 544 aa20.43■□□□□ 0.86
NECTIN1-202ENST00000340882 COL6A1P12109 1028 aa20.43■□□□□ 0.86
NECTIN1-202ENST00000340882 BTDP43251 543 aa20.43■□□□□ 0.86
NECTIN1-202ENST00000340882 GCLCP48506 637 aaPredicted RBP20.43■□□□□ 0.86
NECTIN1-202ENST00000340882 LRRC26Q2I0M4 334 aa20.43■□□□□ 0.86
NECTIN1-202ENST00000340882 FAM161BQ96MY7 647 aa20.43■□□□□ 0.86
NECTIN1-202ENST00000340882 COL2A1P02458 1487 aaPredicted RBP20.43■□□□□ 0.86
NECTIN1-202ENST00000340882 SIPA1L1O43166 1804 aa20.42■□□□□ 0.86
NECTIN1-202ENST00000340882 PRKAR2AP13861 404 aaKnown RBP20.42■□□□□ 0.86
NECTIN1-202ENST00000340882 RHBDL3P58872 404 aa20.42■□□□□ 0.86
NECTIN1-202ENST00000340882 ZNF280CQ8ND82 737 aa20.42■□□□□ 0.86
NECTIN1-202ENST00000340882 ZNF384Q8TF68 577 aa20.42■□□□□ 0.86
NECTIN1-202ENST00000340882 GNL3LQ9NVN8 582 aaKnown RBP20.42■□□□□ 0.86
NECTIN1-202ENST00000340882 TBC1D12O60347 775 aa20.41■□□□□ 0.86
NECTIN1-202ENST00000340882 FAM163AQ96GL9 167 aaPredicted RBP20.41■□□□□ 0.86
NECTIN1-202ENST00000340882 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.41■□□□□ 0.86
NECTIN1-202ENST00000340882 MORF4L1Q9UBU8 362 aa20.41■□□□□ 0.86
NECTIN1-202ENST00000340882 MAST2Q6P0Q8 1798 aa20.41■□□□□ 0.86
NECTIN1-202ENST00000340882 SEMA3EO15041 775 aa20.4■□□□□ 0.86
NECTIN1-202ENST00000340882 RASGRF1Q13972 1273 aa20.4■□□□□ 0.86
NECTIN1-202ENST00000340882 CCDC102BQ68D86 513 aa20.4■□□□□ 0.86
NECTIN1-202ENST00000340882 LHX8Q68G74 356 aa20.4■□□□□ 0.86
NECTIN1-202ENST00000340882 DZIP1Q86YF9 867 aaKnown RBP20.4■□□□□ 0.86
NECTIN1-202ENST00000340882 TXNRD2Q9NNW7 524 aa20.4■□□□□ 0.86
NECTIN1-202ENST00000340882 CEP126Q9P2H0 1117 aa20.4■□□□□ 0.86
NECTIN1-202ENST00000340882 ABCF2Q9UG63 623 aa20.4■□□□□ 0.86
NECTIN1-202ENST00000340882 MROH7-TTC4A0A0A0MT08 1334 aa20.39■□□□□ 0.85
NECTIN1-202ENST00000340882 CCND3P30281 292 aaPredicted RBP20.39■□□□□ 0.85
NECTIN1-202ENST00000340882 CACNB2Q08289 660 aaPredicted RBP20.39■□□□□ 0.85
NECTIN1-202ENST00000340882 OSBPL5Q9H0X9 879 aaPredicted RBP20.39■□□□□ 0.85
NECTIN1-202ENST00000340882 CCL14Q16627 93 aa20.38■□□□□ 0.85
NECTIN1-202ENST00000340882 SH3D19Q5HYK7 790 aa20.38■□□□□ 0.85
NECTIN1-202ENST00000340882 P2RX7Q99572 595 aaKnown RBP20.38■□□□□ 0.85
NECTIN1-202ENST00000340882 MRS2Q9HD23 443 aa20.38■□□□□ 0.85
NECTIN1-202ENST00000340882 PA2G4Q9UQ80 394 aaKnown RBP20.38■□□□□ 0.85
NECTIN1-202ENST00000340882 LTBP2Q14767 1821 aa20.38■□□□□ 0.85
NECTIN1-202ENST00000340882 GPR75-ASB3A0A0A6YYF3 556 aa20.37■□□□□ 0.85
NECTIN1-202ENST00000340882 CIAO1O76071 339 aa20.37■□□□□ 0.85
NECTIN1-202ENST00000340882 CAP2P40123 477 aa20.37■□□□□ 0.85
NECTIN1-202ENST00000340882 JAG1P78504 1218 aa20.37■□□□□ 0.85
NECTIN1-202ENST00000340882 MECOMQ03112 1051 aa20.37■□□□□ 0.85
NECTIN1-202ENST00000340882 FAM109BQ6ICB4 259 aaPredicted RBP20.37■□□□□ 0.85
NECTIN1-202ENST00000340882 ZGPATQ8N5A5 531 aaKnown RBP20.37■□□□□ 0.85
NECTIN1-202ENST00000340882 USP17L5A8MUK1 530 aa20.36■□□□□ 0.85
NECTIN1-202ENST00000340882 ZBTB22O15209 634 aa20.36■□□□□ 0.85
NECTIN1-202ENST00000340882 TIMM10P62072 90 aa20.36■□□□□ 0.85
NECTIN1-202ENST00000340882 PABPC4Q13310 644 aaKnown RBP eCLIP20.36■□□□□ 0.85
NECTIN1-202ENST00000340882 Q3C1V9 767 aa20.36■□□□□ 0.85
NECTIN1-202ENST00000340882 POTEEQ6S8J3 1075 aa20.36■□□□□ 0.85
NECTIN1-202ENST00000340882 USP6NLQ92738 828 aa20.36■□□□□ 0.85
NECTIN1-202ENST00000340882 NUDT12Q9BQG2 462 aa20.36■□□□□ 0.85
NECTIN1-202ENST00000340882 CDK5RAP2Q96SN8 1893 aa20.36■□□□□ 0.85
NECTIN1-202ENST00000340882 PTPRCP08575 1304 aa20.35■□□□□ 0.85
NECTIN1-202ENST00000340882 CDH23Q9H251 3354 aa20.35■□□□□ 0.85
NECTIN1-202ENST00000340882 XRCC5P13010 732 aaKnown RBP20.35■□□□□ 0.85
NECTIN1-202ENST00000340882 SHROOM1Q2M3G4 852 aaPredicted RBP20.35■□□□□ 0.85
NECTIN1-202ENST00000340882 PORCNQ9H237 461 aa20.35■□□□□ 0.85
NECTIN1-202ENST00000340882 NPM3O75607 178 aaKnown RBP20.34■□□□□ 0.85
NECTIN1-202ENST00000340882 MTMR2Q13614 643 aa20.34■□□□□ 0.85
NECTIN1-202ENST00000340882 SLF2Q8IX21 1173 aa20.34■□□□□ 0.85
NECTIN1-202ENST00000340882 SSH1Q8WYL5 1049 aa20.34■□□□□ 0.85
NECTIN1-202ENST00000340882 RBPJLQ9UBG7 517 aa20.34■□□□□ 0.85
NECTIN1-202ENST00000340882 FBXO3Q9UK99 471 aa20.34■□□□□ 0.85
NECTIN1-202ENST00000340882 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.34■□□□□ 0.85
NECTIN1-202ENST00000340882 ZKSCAN1P17029 563 aaPredicted RBP20.33■□□□□ 0.85
NECTIN1-202ENST00000340882 HERVK_113P62684 666 aa20.33■□□□□ 0.85
NECTIN1-202ENST00000340882 IRX3P78415 501 aaPredicted RBP20.33■□□□□ 0.85
NECTIN1-202ENST00000340882 PDS5AQ29RF7 1337 aaKnown RBP20.32■□□□□ 0.84
NECTIN1-202ENST00000340882 HOXA7P31268 230 aaPredicted RBP20.32■□□□□ 0.84
NECTIN1-202ENST00000340882 IL15P40933 162 aaPredicted RBP20.32■□□□□ 0.84
NECTIN1-202ENST00000340882 MORN1Q5T089 497 aa20.32■□□□□ 0.84
NECTIN1-202ENST00000340882 PI16Q6UXB8 463 aa20.32■□□□□ 0.84
NECTIN1-202ENST00000340882 ERICH6Q7L0X2 663 aa20.32■□□□□ 0.84
NECTIN1-202ENST00000340882 GPRC5AQ8NFJ5 357 aa20.32■□□□□ 0.84
NECTIN1-202ENST00000340882 SOCS4Q8WXH5 440 aa20.32■□□□□ 0.84
NECTIN1-202ENST00000340882 TBC1D2Q9BYX2 928 aa20.32■□□□□ 0.84
NECTIN1-202ENST00000340882 RLFQ13129 1914 aa20.31■□□□□ 0.84
NECTIN1-202ENST00000340882 BACE1P56817 501 aa20.31■□□□□ 0.84
NECTIN1-202ENST00000340882 SPTY2D1Q68D10 685 aaPredicted RBP20.31■□□□□ 0.84
NECTIN1-202ENST00000340882 TBC1D9Q6ZT07 1266 aa20.31■□□□□ 0.84
NECTIN1-202ENST00000340882 GPR142Q7Z601 462 aa20.31■□□□□ 0.84
NECTIN1-202ENST00000340882 NSUN4Q96CB9 384 aaKnown RBP20.31■□□□□ 0.84
NECTIN1-202ENST00000340882 CDX2Q99626 313 aaPredicted RBP20.31■□□□□ 0.84
NECTIN1-202ENST00000340882 WDR18Q9BV38 432 aa20.31■□□□□ 0.84
NECTIN1-202ENST00000340882 SENP6Q9GZR1 1112 aaPredicted RBP20.31■□□□□ 0.84
NECTIN1-202ENST00000340882 ERVK-9P63128 1117 aa20.3■□□□□ 0.84
NECTIN1-202ENST00000340882 ERVK-24P63145 666 aa20.3■□□□□ 0.84
NECTIN1-202ENST00000340882 XAGE2Q96GT9 111 aa20.3■□□□□ 0.84
NECTIN1-202ENST00000340882 AS3MTQ9HBK9 375 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms