RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 HSPA1AP0DMV8 641 aaKnown RBP18.37■□□□□ 0.53
UBE3B-201ENST00000340074 HSPA1BP0DMV9 641 aaKnown RBP18.37■□□□□ 0.53
UBE3B-201ENST00000340074 CNKSR2Q8WXI2 1034 aa18.37■□□□□ 0.53
UBE3B-201ENST00000340074 OSBP2Q969R2 916 aa18.37■□□□□ 0.53
UBE3B-201ENST00000340074 OPTNQ96CV9 577 aa18.37■□□□□ 0.53
UBE3B-201ENST00000340074 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.37■□□□□ 0.53
UBE3B-201ENST00000340074 GJA5P36382 358 aa18.36■□□□□ 0.53
UBE3B-201ENST00000340074 DCP1AQ9NPI6 582 aaPredicted RBP18.36■□□□□ 0.53
UBE3B-201ENST00000340074 WBP1LQ9NX94 342 aa18.36■□□□□ 0.53
UBE3B-201ENST00000340074 PTPRFP10586 1907 aa18.35■□□□□ 0.53
UBE3B-201ENST00000340074 M0R2C6 588 aa18.35■□□□□ 0.53
UBE3B-201ENST00000340074 HLA-DOAP06340 250 aa18.35■□□□□ 0.53
UBE3B-201ENST00000340074 ZBTB48P10074 688 aaPredicted RBP18.35■□□□□ 0.53
UBE3B-201ENST00000340074 RILPL2Q969X0 211 aa18.35■□□□□ 0.53
UBE3B-201ENST00000340074 SEC62Q99442 399 aaKnown RBP18.35■□□□□ 0.53
UBE3B-201ENST00000340074 HERC5Q9UII4 1024 aaKnown RBP18.35■□□□□ 0.53
UBE3B-201ENST00000340074 SLC4A4Q9Y6R1 1079 aa18.35■□□□□ 0.53
UBE3B-201ENST00000340074 SPDYE5A6NIY4 337 aa18.34■□□□□ 0.53
UBE3B-201ENST00000340074 NOL9Q5SY16 702 aaKnown RBP18.34■□□□□ 0.53
UBE3B-201ENST00000340074 CENPQQ7L2Z9 268 aaPredicted RBP18.34■□□□□ 0.53
UBE3B-201ENST00000340074 FOXP4Q8IVH2 680 aaPredicted RBP18.34■□□□□ 0.53
UBE3B-201ENST00000340074 CRACR2BQ8N4Y2 399 aaPredicted RBP18.34■□□□□ 0.53
UBE3B-201ENST00000340074 OTUD5Q96G74 571 aa18.34■□□□□ 0.53
UBE3B-201ENST00000340074 STRBPQ96SI9 672 aaKnown RBP18.34■□□□□ 0.53
UBE3B-201ENST00000340074 ATP8A2Q9NTI2 1148 aa18.34■□□□□ 0.53
UBE3B-201ENST00000340074 MCM9Q9NXL9 1143 aa18.34■□□□□ 0.53
UBE3B-201ENST00000340074 GPAA1O43292 621 aa18.33■□□□□ 0.53
UBE3B-201ENST00000340074 POLR3DP05423 398 aaPredicted RBP18.33■□□□□ 0.53
UBE3B-201ENST00000340074 PLCD1P51178 756 aa18.33■□□□□ 0.53
UBE3B-201ENST00000340074 ZMYM1Q5SVZ6 1142 aa18.33■□□□□ 0.53
UBE3B-201ENST00000340074 METTL16Q86W50 562 aaKnown RBP18.33■□□□□ 0.53
UBE3B-201ENST00000340074 ERO1BQ86YB8 467 aa18.33■□□□□ 0.53
UBE3B-201ENST00000340074 CCDC136Q96JN2 1154 aa18.33■□□□□ 0.53
UBE3B-201ENST00000340074 DNAJC18Q9H819 358 aa18.33■□□□□ 0.53
UBE3B-201ENST00000340074 CTNND1O60716 968 aaKnown RBP18.32■□□□□ 0.52
UBE3B-201ENST00000340074 RRP1BQ14684 758 aaKnown RBP18.32■□□□□ 0.52
UBE3B-201ENST00000340074 TTC6Q86TZ1 520 aa18.32■□□□□ 0.52
UBE3B-201ENST00000340074 REM2Q8IYK8 340 aaPredicted RBP18.32■□□□□ 0.52
UBE3B-201ENST00000340074 SCYL3Q8IZE3 742 aa18.32■□□□□ 0.52
UBE3B-201ENST00000340074 BEGAINQ9BUH8 593 aa18.32■□□□□ 0.52
UBE3B-201ENST00000340074 TRIM34Q9BYJ4 488 aa18.32■□□□□ 0.52
UBE3B-201ENST00000340074 FOXN1O15353 648 aa18.32■□□□□ 0.52
UBE3B-201ENST00000340074 TM4SF4P48230 202 aa18.32■□□□□ 0.52
UBE3B-201ENST00000340074 EVX2Q03828 476 aa18.32■□□□□ 0.52
UBE3B-201ENST00000340074 TTC22Q5TAA0 569 aa18.32■□□□□ 0.52
UBE3B-201ENST00000340074 SERPINB13Q9UIV8 391 aa18.32■□□□□ 0.52
UBE3B-201ENST00000340074 MANSC4A6NHS7 340 aaPredicted RBP18.31■□□□□ 0.52
UBE3B-201ENST00000340074 IRF6O14896 467 aa18.31■□□□□ 0.52
UBE3B-201ENST00000340074 CYP2D6P10635 497 aa18.31■□□□□ 0.52
UBE3B-201ENST00000340074 CAP2P40123 477 aa18.31■□□□□ 0.52
UBE3B-201ENST00000340074 PPATQ06203 517 aa18.31■□□□□ 0.52
UBE3B-201ENST00000340074 SREBF2Q12772 1141 aa18.31■□□□□ 0.52
UBE3B-201ENST00000340074 PPIL2Q13356 520 aa18.31■□□□□ 0.52
UBE3B-201ENST00000340074 DDRGK1Q96HY6 314 aa18.31■□□□□ 0.52
UBE3B-201ENST00000340074 EHD4Q9H223 541 aa18.31■□□□□ 0.52
UBE3B-201ENST00000340074 PICK1Q9NRD5 415 aa18.31■□□□□ 0.52
UBE3B-201ENST00000340074 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.31■□□□□ 0.52
UBE3B-201ENST00000340074 GSG1L2A8MUP6 293 aa18.3■□□□□ 0.52
UBE3B-201ENST00000340074 GSPT1P15170 499 aaKnown RBP18.3■□□□□ 0.52
UBE3B-201ENST00000340074 CCDC129Q6ZRS4 1044 aa18.3■□□□□ 0.52
UBE3B-201ENST00000340074 TICAM2Q86XR7 235 aa18.3■□□□□ 0.52
UBE3B-201ENST00000340074 MS4A4AQ96JQ5 239 aa18.3■□□□□ 0.52
UBE3B-201ENST00000340074 FAM227BQ96M60 508 aa18.3■□□□□ 0.52
UBE3B-201ENST00000340074 CYP2D7A0A087X1C5 515 aa18.29■□□□□ 0.52
UBE3B-201ENST00000340074 A0A0D9SFI3 127 aa18.29■□□□□ 0.52
UBE3B-201ENST00000340074 USP17L12C9JPN9 530 aa18.29■□□□□ 0.52
UBE3B-201ENST00000340074 USP17L21D6R901 530 aa18.29■□□□□ 0.52
UBE3B-201ENST00000340074 PTPRAP18433 802 aa18.29■□□□□ 0.52
UBE3B-201ENST00000340074 GNAT2P19087 354 aa18.29■□□□□ 0.52
UBE3B-201ENST00000340074 SDSP20132 328 aa18.29■□□□□ 0.52
UBE3B-201ENST00000340074 GTF2A2P52657 109 aa18.29■□□□□ 0.52
UBE3B-201ENST00000340074 TSKSQ9UJT2 592 aa18.29■□□□□ 0.52
UBE3B-201ENST00000340074 CASP8AP2Q9UKL3 1982 aa18.28■□□□□ 0.52
UBE3B-201ENST00000340074 INHBEP58166 350 aa18.28■□□□□ 0.52
UBE3B-201ENST00000340074 GABPAQ06546 454 aa18.28■□□□□ 0.52
UBE3B-201ENST00000340074 NMIQ13287 307 aaPredicted RBP18.28■□□□□ 0.52
UBE3B-201ENST00000340074 C12orf60Q5U649 245 aa18.28■□□□□ 0.52
UBE3B-201ENST00000340074 CTR9Q6PD62 1173 aa18.28■□□□□ 0.52
UBE3B-201ENST00000340074 CCDC84Q86UT8 332 aaPredicted RBP18.28■□□□□ 0.52
UBE3B-201ENST00000340074 AMOTL1Q8IY63 956 aa18.28■□□□□ 0.52
UBE3B-201ENST00000340074 HELLSQ9NRZ9 838 aa18.28■□□□□ 0.52
UBE3B-201ENST00000340074 RNF186Q9NXI6 227 aa18.28■□□□□ 0.52
UBE3B-201ENST00000340074 ZHX2Q9Y6X8 837 aa18.28■□□□□ 0.52
UBE3B-201ENST00000340074 TESPA1A2RU30 521 aaPredicted RBP18.27■□□□□ 0.52
UBE3B-201ENST00000340074 PATL2C9JE40 543 aaKnown RBP18.27■□□□□ 0.52
UBE3B-201ENST00000340074 SMIM22K7EJ46 135 aa18.27■□□□□ 0.52
UBE3B-201ENST00000340074 TRPA1O75762 1119 aa18.27■□□□□ 0.52
UBE3B-201ENST00000340074 GDF11O95390 407 aa18.27■□□□□ 0.52
UBE3B-201ENST00000340074 APPP05067 770 aa18.27■□□□□ 0.52
UBE3B-201ENST00000340074 JAG1P78504 1218 aa18.27■□□□□ 0.52
UBE3B-201ENST00000340074 SHROOM1Q2M3G4 852 aaPredicted RBP18.27■□□□□ 0.52
UBE3B-201ENST00000340074 TATDN1Q6P1N9 297 aa18.27■□□□□ 0.52
UBE3B-201ENST00000340074 GIMAP6Q6P9H5 292 aa18.27■□□□□ 0.52
UBE3B-201ENST00000340074 SKAP1Q86WV1 359 aa18.27■□□□□ 0.52
UBE3B-201ENST00000340074 IFNL1Q8IU54 200 aa18.27■□□□□ 0.52
UBE3B-201ENST00000340074 DYNLL2Q96FJ2 89 aa18.27■□□□□ 0.52
UBE3B-201ENST00000340074 EPB41L4AQ9HCS5 686 aaPredicted RBP18.27■□□□□ 0.52
UBE3B-201ENST00000340074 CCL15-CCL14A0A0B4J2E2 113 aa18.26■□□□□ 0.51
UBE3B-201ENST00000340074 IGF2BP3O00425 579 aaKnown RBP eCLIP18.26■□□□□ 0.51
UBE3B-201ENST00000340074 CA12O43570 354 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms