RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 MIGA2Q7L4E1 593 aa18.35■□□□□ 0.53
SEC13-201ENST00000337354 TRIM34Q9BYJ4 488 aa18.35■□□□□ 0.53
SEC13-201ENST00000337354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.35■□□□□ 0.53
SEC13-201ENST00000337354 EPB41L4AQ9HCS5 686 aaPredicted RBP18.35■□□□□ 0.53
SEC13-201ENST00000337354 MYO5AQ9Y4I1 1855 aaKnown RBP18.35■□□□□ 0.53
SEC13-201ENST00000337354 ZMYM6O95789 1325 aa18.35■□□□□ 0.53
SEC13-201ENST00000337354 FOXP2O15409 715 aa18.34■□□□□ 0.53
SEC13-201ENST00000337354 FGAP02671 866 aa18.34■□□□□ 0.53
SEC13-201ENST00000337354 GRM1Q13255 1194 aa18.34■□□□□ 0.53
SEC13-201ENST00000337354 SAPCD2Q86UD0 394 aa18.34■□□□□ 0.53
SEC13-201ENST00000337354 CRACR2BQ8N4Y2 399 aaPredicted RBP18.34■□□□□ 0.53
SEC13-201ENST00000337354 SWAP70Q9UH65 585 aa18.34■□□□□ 0.53
SEC13-201ENST00000337354 CTNNA3Q9UI47 895 aa18.34■□□□□ 0.53
SEC13-201ENST00000337354 ZNF112Q9UJU3 913 aa18.34■□□□□ 0.53
SEC13-201ENST00000337354 ANGEL1Q9UNK9 670 aaKnown RBP18.34■□□□□ 0.53
SEC13-201ENST00000337354 MAP3K9P80192 1104 aa18.33■□□□□ 0.53
SEC13-201ENST00000337354 PRKG1Q13976 671 aa18.33■□□□□ 0.53
SEC13-201ENST00000337354 DEFB115Q30KQ5 88 aa18.33■□□□□ 0.53
SEC13-201ENST00000337354 LDLRAD1Q5T700 205 aa18.33■□□□□ 0.53
SEC13-201ENST00000337354 ANKRD13AQ8IZ07 590 aa18.33■□□□□ 0.53
SEC13-201ENST00000337354 HHIPL1Q96JK4 782 aa18.33■□□□□ 0.53
SEC13-201ENST00000337354 IL25Q9H293 177 aa18.33■□□□□ 0.53
SEC13-201ENST00000337354 TLL2Q9Y6L7 1015 aa18.33■□□□□ 0.53
SEC13-201ENST00000337354 THSD7BQ9C0I4 1608 aa18.33■□□□□ 0.52
SEC13-201ENST00000337354 RASSF10A6NK89 507 aa18.32■□□□□ 0.52
SEC13-201ENST00000337354 MINDY4BA8MYZ0 360 aa18.32■□□□□ 0.52
SEC13-201ENST00000337354 EIF5BO60841 1220 aaKnown RBP18.32■□□□□ 0.52
SEC13-201ENST00000337354 SLC3A2P08195 630 aaKnown RBP18.32■□□□□ 0.52
SEC13-201ENST00000337354 GABPAQ06546 454 aa18.32■□□□□ 0.52
SEC13-201ENST00000337354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.32■□□□□ 0.522e-11■□□□□ 8.9
SEC13-201ENST00000337354 ZNF287Q9HBT7 754 aa18.32■□□□□ 0.52
SEC13-201ENST00000337354 SSC5DA1L4H1 1573 aa18.32■□□□□ 0.52
SEC13-201ENST00000337354 PHF20L1A8MW92 1017 aa18.31■□□□□ 0.52
SEC13-201ENST00000337354 UBE2Q2LH0YL09 131 aa18.31■□□□□ 0.52
SEC13-201ENST00000337354 CTNND1O60716 968 aaKnown RBP18.31■□□□□ 0.52
SEC13-201ENST00000337354 HUNKP57058 714 aa18.31■□□□□ 0.52
SEC13-201ENST00000337354 TATDN1Q6P1N9 297 aa18.31■□□□□ 0.52
SEC13-201ENST00000337354 WRNIP1Q96S55 665 aa18.31■□□□□ 0.52
SEC13-201ENST00000337354 ANAPC4Q9UJX5 808 aa18.31■□□□□ 0.52
SEC13-201ENST00000337354 CYP2D6P10635 497 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 VEGFBP49765 207 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 PPARAQ07869 468 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 SLC4A8Q2Y0W8 1093 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 MAP4K1Q92918 833 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 GINM1Q9NU53 330 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 CSADQ9Y600 493 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 CYP2D7A0A087X1C5 515 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 ZNF213O14771 459 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 CYP4F22Q6NT55 531 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 C16orf86Q6ZW13 317 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 MOB2Q70IA6 237 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 CAPNS2Q96L46 248 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 DNAJC18Q9H819 358 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 FZD1Q9UP38 647 aa18.3■□□□□ 0.52
SEC13-201ENST00000337354 U3KPZ7 1027 aaPredicted RBP18.3■□□□□ 0.52
SEC13-201ENST00000337354 AK9Q5TCS8 1911 aa18.29■□□□□ 0.52
SEC13-201ENST00000337354 EPB41L2O43491 1005 aaKnown RBP18.29■□□□□ 0.52
SEC13-201ENST00000337354 REC8O95072 547 aa18.29■□□□□ 0.52
SEC13-201ENST00000337354 PCP11498 1178 aaKnown RBP18.29■□□□□ 0.52
SEC13-201ENST00000337354 ECE1P42892 770 aa18.29■□□□□ 0.52
SEC13-201ENST00000337354 CDK8P49336 464 aa18.29■□□□□ 0.52
SEC13-201ENST00000337354 PDE4BQ07343 736 aa18.29■□□□□ 0.52
SEC13-201ENST00000337354 IMMTQ16891 758 aaKnown RBP18.29■□□□□ 0.52
SEC13-201ENST00000337354 NOL9Q5SY16 702 aaKnown RBP18.29■□□□□ 0.52
SEC13-201ENST00000337354 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.29■□□□□ 0.52
SEC13-201ENST00000337354 JMYQ8N9B5 988 aa18.29■□□□□ 0.52
SEC13-201ENST00000337354 SLC10A4Q96EP9 437 aa18.29■□□□□ 0.52
SEC13-201ENST00000337354 CCDC17Q96LX7 622 aa18.29■□□□□ 0.52
SEC13-201ENST00000337354 ANO2Q9NQ90 1003 aa18.29■□□□□ 0.52
SEC13-201ENST00000337354 ROBO3Q96MS0 1386 aa18.28■□□□□ 0.52
SEC13-201ENST00000337354 MYH7P12883 1935 aa18.28■□□□□ 0.52
SEC13-201ENST00000337354 FAM196BA6NMK8 535 aa18.28■□□□□ 0.52
SEC13-201ENST00000337354 CAP2P40123 477 aa18.28■□□□□ 0.52
SEC13-201ENST00000337354 NT5C2P49902 561 aa18.28■□□□□ 0.52
SEC13-201ENST00000337354 PTH1RQ03431 593 aa18.28■□□□□ 0.52
SEC13-201ENST00000337354 CERKLQ49MI3 558 aaPredicted RBP18.28■□□□□ 0.52
SEC13-201ENST00000337354 RGMBQ6NW40 437 aa18.28■□□□□ 0.52
SEC13-201ENST00000337354 CCDC102AQ96A19 550 aa18.28■□□□□ 0.52
SEC13-201ENST00000337354 DYNLL2Q96FJ2 89 aa18.28■□□□□ 0.52
SEC13-201ENST00000337354 LSG1Q9H089 658 aaKnown RBP18.28■□□□□ 0.52
SEC13-201ENST00000337354 MKNK2Q9HBH9 465 aa18.28■□□□□ 0.52
SEC13-201ENST00000337354 OTOFQ9HC10 1997 aa18.28■□□□□ 0.52
SEC13-201ENST00000337354 WDR33Q9C0J8 1336 aaKnown RBP18.27■□□□□ 0.52
SEC13-201ENST00000337354 SLURP2P0DP57 97 aa18.27■□□□□ 0.51
SEC13-201ENST00000337354 INPP5BP32019 993 aa18.27■□□□□ 0.51
SEC13-201ENST00000337354 SHMT1P34896 483 aa18.27■□□□□ 0.51
SEC13-201ENST00000337354 VGLL4Q14135 290 aa18.27■□□□□ 0.51
SEC13-201ENST00000337354 SCYL3Q8IZE3 742 aa18.27■□□□□ 0.51
SEC13-201ENST00000337354 ZKSCAN4Q969J2 545 aaPredicted RBP18.27■□□□□ 0.51
SEC13-201ENST00000337354 RNF41Q9H4P4 317 aaPredicted RBP18.27■□□□□ 0.51
SEC13-201ENST00000337354 PICK1Q9NRD5 415 aa18.27■□□□□ 0.51
SEC13-201ENST00000337354 ASNSP08243 561 aa18.26■□□□□ 0.51
SEC13-201ENST00000337354 FGRP09769 529 aa18.26■□□□□ 0.51
SEC13-201ENST00000337354 ZNF157P51786 506 aaPredicted RBP18.26■□□□□ 0.51
SEC13-201ENST00000337354 EVX2Q03828 476 aa18.26■□□□□ 0.51
SEC13-201ENST00000337354 ZNF444Q8N0Y2 327 aaPredicted RBP18.26■□□□□ 0.51
SEC13-201ENST00000337354 CABP5Q9NP86 173 aa18.26■□□□□ 0.51
SEC13-201ENST00000337354 SMIM22K7EJ46 135 aa18.25■□□□□ 0.51
SEC13-201ENST00000337354 ERO1BQ86YB8 467 aa18.25■□□□□ 0.51
SEC13-201ENST00000337354 TBC1D2Q9BYX2 928 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms