RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 EEF2KMTQ96G04 330 aa23.3■■□□□ 1.32
CMTM4-201ENST00000330687 DENND2AQ9ULE3 1009 aa23.3■■□□□ 1.32
CMTM4-201ENST00000330687 IGSF1Q8N6C5 1336 aa23.3■■□□□ 1.32
CMTM4-201ENST00000330687 MYBL2P10244 700 aa23.3■■□□□ 1.32
CMTM4-201ENST00000330687 CDHR2Q9BYE9 1310 aa23.3■■□□□ 1.32
CMTM4-201ENST00000330687 MMP14P50281 582 aa23.3■■□□□ 1.32
CMTM4-201ENST00000330687 SLC39A6Q13433 755 aa23.3■■□□□ 1.32
CMTM4-201ENST00000330687 WHAMMP3Q1A5X7 153 aa23.3■■□□□ 1.32
CMTM4-201ENST00000330687 KIDINS220Q9ULH0 1771 aa23.3■■□□□ 1.32
CMTM4-201ENST00000330687 ZNF185O15231 689 aa23.29■■□□□ 1.32
CMTM4-201ENST00000330687 ABTB2Q8N961 1025 aa23.29■■□□□ 1.32
CMTM4-201ENST00000330687 SELENOOQ9BVL4 669 aa23.29■■□□□ 1.32
CMTM4-201ENST00000330687 FRMPD1Q5SYB0 1578 aa23.29■■□□□ 1.32
CMTM4-201ENST00000330687 LMOD2Q6P5Q4 547 aa23.29■■□□□ 1.32
CMTM4-201ENST00000330687 SH2D3CQ8N5H7 860 aa23.29■■□□□ 1.32
CMTM4-201ENST00000330687 N4BP2L2Q92802 583 aaPredicted RBP23.29■■□□□ 1.32
CMTM4-201ENST00000330687 ALKQ9UM73 1620 aa23.29■■□□□ 1.32
CMTM4-201ENST00000330687 NEBLO76041 1014 aa23.29■■□□□ 1.32
CMTM4-201ENST00000330687 USP49Q70CQ1 688 aa23.29■■□□□ 1.32
CMTM4-201ENST00000330687 KIAA1328Q86T90 577 aa23.29■■□□□ 1.32
CMTM4-201ENST00000330687 GNL3LQ9NVN8 582 aaKnown RBP23.29■■□□□ 1.32
CMTM4-201ENST00000330687 DACH1Q9UI36 760 aa23.29■■□□□ 1.32
CMTM4-201ENST00000330687 KRT9P35527 623 aa23.28■■□□□ 1.32
CMTM4-201ENST00000330687 SLC7A5Q01650 507 aa23.28■■□□□ 1.32
CMTM4-201ENST00000330687 C2orf54Q08AI8 447 aa23.28■■□□□ 1.32
CMTM4-201ENST00000330687 IMMTQ16891 758 aaKnown RBP23.28■■□□□ 1.32
CMTM4-201ENST00000330687 LRRC59Q96AG4 307 aaKnown RBP23.28■■□□□ 1.32
CMTM4-201ENST00000330687 DONSONQ9NYP3 566 aa23.28■■□□□ 1.32
CMTM4-201ENST00000330687 KCNJ14Q9UNX9 436 aa23.28■■□□□ 1.32
CMTM4-201ENST00000330687 METAP2P50579 478 aaKnown RBP eCLIP23.28■■□□□ 1.32
CMTM4-201ENST00000330687 ARHGEF25Q86VW2 580 aa23.28■■□□□ 1.32
CMTM4-201ENST00000330687 SCLT1Q96NL6 688 aa23.28■■□□□ 1.32
CMTM4-201ENST00000330687 SLC26A6Q9BXS9 759 aa23.28■■□□□ 1.32
CMTM4-201ENST00000330687 TAB2Q9NYJ8 693 aa23.28■■□□□ 1.32
CMTM4-201ENST00000330687 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.28■■□□□ 1.32
CMTM4-201ENST00000330687 SALL1Q9NSC2 1324 aa23.28■■□□□ 1.32
CMTM4-201ENST00000330687 MACROD2A1Z1Q3 448 aa23.27■■□□□ 1.32
CMTM4-201ENST00000330687 IFIT1P09914 478 aaKnown RBP23.27■■□□□ 1.32
CMTM4-201ENST00000330687 NF2P35240 595 aa23.27■■□□□ 1.32
CMTM4-201ENST00000330687 COG1Q8WTW3 980 aa23.27■■□□□ 1.32
CMTM4-201ENST00000330687 AIDAQ96BJ3 306 aa23.27■■□□□ 1.32
CMTM4-201ENST00000330687 CCDC122Q5T0U0 273 aa23.27■■□□□ 1.32
CMTM4-201ENST00000330687 CMTR1Q8N1G2 835 aaKnown RBP23.27■■□□□ 1.32
CMTM4-201ENST00000330687 CEP170BQ9Y4F5 1589 aaPredicted RBP23.27■■□□□ 1.32
CMTM4-201ENST00000330687 HOXC9P31274 260 aa23.27■■□□□ 1.32
CMTM4-201ENST00000330687 E2F5Q15329 346 aa23.27■■□□□ 1.32
CMTM4-201ENST00000330687 CABS1Q96KC9 395 aa23.27■■□□□ 1.32
CMTM4-201ENST00000330687 CHP1Q99653 195 aa23.27■■□□□ 1.32
CMTM4-201ENST00000330687 ATP1A1P05023 1023 aaKnown RBP23.26■■□□□ 1.31
CMTM4-201ENST00000330687 KRI1Q8N9T8 703 aaKnown RBP23.26■■□□□ 1.31
CMTM4-201ENST00000330687 TTF2Q9UNY4 1162 aaKnown RBP23.26■■□□□ 1.31
CMTM4-201ENST00000330687 PIK3C2BO00750 1634 aa23.26■■□□□ 1.31
CMTM4-201ENST00000330687 MFAP3LO75121 409 aa23.26■■□□□ 1.31
CMTM4-201ENST00000330687 RRP36Q96EU6 259 aaKnown RBP23.26■■□□□ 1.31
CMTM4-201ENST00000330687 NR1I3Q14994 352 aa23.26■■□□□ 1.31
CMTM4-201ENST00000330687 SWT1Q5T5J6 900 aaKnown RBP23.26■■□□□ 1.31
CMTM4-201ENST00000330687 KCNG1Q9UIX4 513 aa23.26■■□□□ 1.31
CMTM4-201ENST00000330687 M0R2C6 588 aa23.25■■□□□ 1.31
CMTM4-201ENST00000330687 C1orf141Q5JVX7 400 aa23.25■■□□□ 1.31
CMTM4-201ENST00000330687 COPS6Q7L5N1 327 aa23.25■■□□□ 1.31
CMTM4-201ENST00000330687 MAST3O60307 1309 aa23.25■■□□□ 1.31
CMTM4-201ENST00000330687 BTBD18B2RXH4 712 aa23.25■■□□□ 1.31
CMTM4-201ENST00000330687 PPARAQ07869 468 aa23.25■■□□□ 1.31
CMTM4-201ENST00000330687 MLKLQ8NB16 471 aa23.25■■□□□ 1.31
CMTM4-201ENST00000330687 XAGE3Q8WTP9 111 aa23.25■■□□□ 1.31
CMTM4-201ENST00000330687 PCMTD1Q96MG8 357 aaPredicted RBP23.25■■□□□ 1.31
CMTM4-201ENST00000330687 SEC31BQ9NQW1 1179 aa23.25■■□□□ 1.31
CMTM4-201ENST00000330687 PRPF6O94906 941 aaKnown RBP23.24■■□□□ 1.31
CMTM4-201ENST00000330687 IGKV5-2P06315 115 aa23.24■■□□□ 1.31
CMTM4-201ENST00000330687 CDR1P51861 262 aa23.24■■□□□ 1.31
CMTM4-201ENST00000330687 USP14P54578 494 aa23.24■■□□□ 1.31
CMTM4-201ENST00000330687 TSR1Q2NL82 804 aaKnown RBP23.24■■□□□ 1.31
CMTM4-201ENST00000330687 POTEDQ86YR6 584 aa23.24■■□□□ 1.31
CMTM4-201ENST00000330687 PANX2Q96RD6 677 aa23.24■■□□□ 1.31
CMTM4-201ENST00000330687 WWC3Q9ULE0 1092 aa23.24■■□□□ 1.31
CMTM4-201ENST00000330687 SAR1BQ9Y6B6 198 aa23.24■■□□□ 1.31
CMTM4-201ENST00000330687 HAUS7Q99871 368 aa23.24■■□□□ 1.31
CMTM4-201ENST00000330687 RPSAP08865 295 aaKnown RBP23.24■■□□□ 1.31
CMTM4-201ENST00000330687 ERVK-24P63145 666 aa23.24■■□□□ 1.31
CMTM4-201ENST00000330687 RESP18Q5W5W9 173 aa23.24■■□□□ 1.31
CMTM4-201ENST00000330687 SYNRGQ9UMZ2 1314 aa23.23■■□□□ 1.31
CMTM4-201ENST00000330687 CCDC196A0A1B0GTZ2 297 aa23.23■■□□□ 1.31
CMTM4-201ENST00000330687 LMBR1LQ6UX01 489 aa23.23■■□□□ 1.31
CMTM4-201ENST00000330687 CNGA4Q8IV77 575 aa23.23■■□□□ 1.31
CMTM4-201ENST00000330687 ENOX1Q8TC92 643 aaKnown RBP23.23■■□□□ 1.31
CMTM4-201ENST00000330687 CTNND2Q9UQB3 1225 aa23.23■■□□□ 1.31
CMTM4-201ENST00000330687 GYPCP04921 128 aa23.23■■□□□ 1.31
CMTM4-201ENST00000330687 IARSP41252 1262 aaKnown RBP23.23■■□□□ 1.31
CMTM4-201ENST00000330687 CCDC70Q6NSX1 233 aa23.23■■□□□ 1.31
CMTM4-201ENST00000330687 NOC3LQ8WTT2 800 aaKnown RBP23.23■■□□□ 1.31
CMTM4-201ENST00000330687 MED15Q96RN5 788 aa23.23■■□□□ 1.31
CMTM4-201ENST00000330687 A0A087WZG4 1122 aa23.23■■□□□ 1.31
CMTM4-201ENST00000330687 EZH2Q15910 746 aaKnown RBP23.23■■□□□ 1.31
CMTM4-201ENST00000330687 RRP12Q5JTH9 1297 aaKnown RBP23.23■■□□□ 1.31
CMTM4-201ENST00000330687 ESF1Q9H501 851 aaKnown RBP23.23■■□□□ 1.31
CMTM4-201ENST00000330687 SBNO1A3KN83 1393 aa23.22■■□□□ 1.31
CMTM4-201ENST00000330687 RNF225M0QZC1 329 aaPredicted RBP23.22■■□□□ 1.31
CMTM4-201ENST00000330687 OSBP2Q969R2 916 aa23.22■■□□□ 1.31
CMTM4-201ENST00000330687 ZNF594Q96JF6 807 aaPredicted RBP23.22■■□□□ 1.31
CMTM4-201ENST00000330687 NBPF3Q9H094 633 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms