RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 MTMR3Q13615 1198 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 NXNQ6DKJ4 435 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 NUCKS1Q9H1E3 243 aaKnown RBP18.29■□□□□ 0.52
SMAD3-201ENST00000327367 ANKRD65E5RJM6 399 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 SLF2Q8IX21 1173 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 TCP11Q8WWU5 503 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 SAR1BQ9Y6B6 198 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 SLC9C1Q4G0N8 1177 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 CEP85Q6P2H3 762 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 DISP3Q9P2K9 1392 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 RAD51AP2Q09MP3 1159 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 RPS6KA1Q15418 735 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 ANLNQ9NQW6 1124 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 WDR70Q9NW82 654 aa18.29■□□□□ 0.52
SMAD3-201ENST00000327367 DBN1Q16643 649 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 ZMYND10O75800 440 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 ECM2O94769 699 aaPredicted RBP18.28■□□□□ 0.52
SMAD3-201ENST00000327367 ATICP31939 592 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 TRPC3Q13507 836 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 TMTC1Q8IUR5 882 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 RRP36Q96EU6 259 aaKnown RBP18.28■□□□□ 0.52
SMAD3-201ENST00000327367 CHAMP1Q96JM3 812 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 CSRNP2Q9H175 543 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 MGEA5O60502 916 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 HLA-DOAP06340 250 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 PIK3AP1Q6ZUJ8 805 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 NAIPQ13075 1403 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 LUC7L3O95232 432 aaKnown RBP18.28■□□□□ 0.52
SMAD3-201ENST00000327367 MAGEB6Q8N7X4 407 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 ZMAT2Q96NC0 199 aaKnown RBP18.28■□□□□ 0.52
SMAD3-201ENST00000327367 BICC1Q9H694 974 aaKnown RBP18.28■□□□□ 0.52
SMAD3-201ENST00000327367 ZNF500O60304 480 aaPredicted RBP18.28■□□□□ 0.52
SMAD3-201ENST00000327367 GOLGA8FQ08AF8 430 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 GOLGA8DPQ0D2H9 430 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 BIRC3Q13489 604 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 SPDL1Q96EA4 605 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 HAUS7Q99871 368 aa18.28■□□□□ 0.52
SMAD3-201ENST00000327367 RPS6KB1P23443 525 aa18.27■□□□□ 0.52
SMAD3-201ENST00000327367 ADCY1Q08828 1119 aa18.27■□□□□ 0.52
SMAD3-201ENST00000327367 PTPN21Q16825 1174 aa18.27■□□□□ 0.52
SMAD3-201ENST00000327367 NCOA1Q15788 1441 aa18.27■□□□□ 0.52
SMAD3-201ENST00000327367 TROVE2P10155 538 aaKnown RBP eCLIP18.27■□□□□ 0.526e-7■■■□□ 17.7
SMAD3-201ENST00000327367 PEX26Q7Z412 305 aa18.27■□□□□ 0.52
SMAD3-201ENST00000327367 PDCD7Q8N8D1 485 aaKnown RBP18.27■□□□□ 0.52
SMAD3-201ENST00000327367 NELFBQ8WX92 580 aa18.27■□□□□ 0.52
SMAD3-201ENST00000327367 FAM133BQ5BKY9 247 aaKnown RBP18.27■□□□□ 0.52
SMAD3-201ENST00000327367 MAEAQ7L5Y9 396 aa18.27■□□□□ 0.52
SMAD3-201ENST00000327367 TAB3Q8N5C8 712 aaPredicted RBP18.27■□□□□ 0.52
SMAD3-201ENST00000327367 CHMP2AO43633 222 aa18.27■□□□□ 0.51
SMAD3-201ENST00000327367 PDZD8Q8NEN9 1154 aa18.27■□□□□ 0.51
SMAD3-201ENST00000327367 FAM207AQ9NSI2 230 aaPredicted RBP18.27■□□□□ 0.51
SMAD3-201ENST00000327367 KIF22Q14807 665 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 MAGEB6P1A0A0J9YX57 407 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 RNF113AO15541 343 aaKnown RBP18.26■□□□□ 0.51
SMAD3-201ENST00000327367 IFNAR2P48551 515 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 BSPRYQ5W0U4 402 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 JAG2Q9Y219 1238 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 MAP3K1Q13233 1512 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 TFCP2Q12800 502 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 DYMQ7RTS9 669 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 IFIH1Q9BYX4 1025 aaKnown RBP18.26■□□□□ 0.51
SMAD3-201ENST00000327367 PPP2R2CQ9Y2T4 447 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 AFG3L2Q9Y4W6 797 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 UQCRFS1P1P0C7P4 283 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 NAA16Q6N069 864 aaPredicted RBP18.26■□□□□ 0.51
SMAD3-201ENST00000327367 FAN1Q9Y2M0 1017 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 CCNT1O60563 726 aaKnown RBP18.26■□□□□ 0.51
SMAD3-201ENST00000327367 LRRC23Q53EV4 343 aaPredicted RBP18.26■□□□□ 0.51
SMAD3-201ENST00000327367 RRAGAQ7L523 313 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 SNX14Q9Y5W7 946 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 RTL9Q8NET4 1388 aa18.26■□□□□ 0.51
SMAD3-201ENST00000327367 FAM71BQ8TC56 605 aa18.25■□□□□ 0.51
SMAD3-201ENST00000327367 NLRC4Q9NPP4 1024 aa18.25■□□□□ 0.51
SMAD3-201ENST00000327367 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.25■□□□□ 0.51
SMAD3-201ENST00000327367 KCNK3O14649 394 aa18.25■□□□□ 0.51
SMAD3-201ENST00000327367 LMBR1LQ6UX01 489 aa18.25■□□□□ 0.51
SMAD3-201ENST00000327367 NRBP1Q9UHY1 535 aa18.25■□□□□ 0.51
SMAD3-201ENST00000327367 JRKLQ9Y4A0 524 aa18.25■□□□□ 0.51
SMAD3-201ENST00000327367 CCDC61Q9Y6R9 512 aa18.25■□□□□ 0.51
SMAD3-201ENST00000327367 SPDYE3A6NKU9 549 aa18.25■□□□□ 0.51
SMAD3-201ENST00000327367 SLC27A2O14975 620 aa18.25■□□□□ 0.51
SMAD3-201ENST00000327367 IL1RL1Q01638 556 aa18.25■□□□□ 0.51
SMAD3-201ENST00000327367 KIFAP3Q92845 792 aa18.25■□□□□ 0.51
SMAD3-201ENST00000327367 VCX3AQ9NNX9 186 aa18.25■□□□□ 0.51
SMAD3-201ENST00000327367 EIF4E1BA6NMX2 242 aaKnown RBP18.24■□□□□ 0.51
SMAD3-201ENST00000327367 KRT24Q2M2I5 525 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 VWA3BQ502W6 1294 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 CTAGE3PQ8IX95 158 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 NELFCDQ8IXH7 590 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 TSPYL6Q8N831 410 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 DAPK1P53355 1430 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 EFCAB8A8MWE9 144 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 CALML3P27482 149 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 LRRC8AQ8IWT6 810 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 SBNO1A3KN83 1393 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 GYS2P54840 703 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 KLHL30Q0D2K2 578 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 C2CD5Q86YS7 1000 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 NCAPD3P42695 1498 aa18.24■□□□□ 0.51
SMAD3-201ENST00000327367 TRPA1O75762 1119 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms