RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 PPP6R2O75170 966 aa22.78■■□□□ 1.24
CRLF3-201ENST00000324238 BCAMP50895 628 aa22.78■■□□□ 1.24
CRLF3-201ENST00000324238 SMYD4Q8IYR2 804 aaPredicted RBP22.78■■□□□ 1.24
CRLF3-201ENST00000324238 KRI1Q8N9T8 703 aaKnown RBP22.78■■□□□ 1.24
CRLF3-201ENST00000324238 MED15Q96RN5 788 aa22.78■■□□□ 1.24
CRLF3-201ENST00000324238 PPP2R2CQ9Y2T4 447 aa22.78■■□□□ 1.24
CRLF3-201ENST00000324238 FHOD1Q9Y613 1164 aa22.78■■□□□ 1.24
CRLF3-201ENST00000324238 VWA3AA6NCI4 1184 aa22.78■■□□□ 1.24
CRLF3-201ENST00000324238 H2AFXP16104 143 aaPredicted RBP22.78■■□□□ 1.24
CRLF3-201ENST00000324238 NOSTRINQ8IVI9 506 aa22.78■■□□□ 1.24
CRLF3-201ENST00000324238 ZCCHC17Q9NP64 241 aaKnown RBP22.78■■□□□ 1.24
CRLF3-201ENST00000324238 CYP19A1P11511 503 aaPredicted RBP22.77■■□□□ 1.24
CRLF3-201ENST00000324238 CABP5Q9NP86 173 aa22.77■■□□□ 1.24
CRLF3-201ENST00000324238 PRDM1O75626 825 aa22.77■■□□□ 1.24
CRLF3-201ENST00000324238 RASGRF1Q13972 1273 aa22.77■■□□□ 1.24
CRLF3-201ENST00000324238 CREBRFQ8IUR6 639 aa22.77■■□□□ 1.24
CRLF3-201ENST00000324238 KCND1Q9NSA2 647 aa22.77■■□□□ 1.24
CRLF3-201ENST00000324238 TDO2P48775 406 aa22.77■■□□□ 1.23
CRLF3-201ENST00000324238 TMEM139Q8IV31 216 aa22.77■■□□□ 1.23
CRLF3-201ENST00000324238 LCORLQ8N3X6 602 aa22.77■■□□□ 1.23
CRLF3-201ENST00000324238 TIGD1Q96MW7 591 aa22.77■■□□□ 1.23
CRLF3-201ENST00000324238 TRERF1Q96PN7 1200 aa22.77■■□□□ 1.23
CRLF3-201ENST00000324238 MPHOSPH8Q99549 860 aa22.77■■□□□ 1.23
CRLF3-201ENST00000324238 ABCF2Q9UG63 623 aa22.77■■□□□ 1.23
CRLF3-201ENST00000324238 TCRBV5S4A2TA0A5A2 114 aa22.76■■□□□ 1.23
CRLF3-201ENST00000324238 MINDY4BA8MYZ0 360 aa22.76■■□□□ 1.23
CRLF3-201ENST00000324238 CUTAO60888 179 aa22.76■■□□□ 1.23
CRLF3-201ENST00000324238 ADAMTS2O95450 1211 aa22.76■■□□□ 1.23
CRLF3-201ENST00000324238 GABPB1Q06547 395 aaPredicted RBP22.76■■□□□ 1.23
CRLF3-201ENST00000324238 POSTNQ15063 836 aa22.76■■□□□ 1.23
CRLF3-201ENST00000324238 TEX35Q5T0J7 233 aa22.76■■□□□ 1.23
CRLF3-201ENST00000324238 VGLL2Q8N8G2 317 aa22.76■■□□□ 1.23
CRLF3-201ENST00000324238 BAG1Q99933 345 aaPredicted RBP22.76■■□□□ 1.23
CRLF3-201ENST00000324238 PARP3Q9Y6F1 533 aa22.76■■□□□ 1.23
CRLF3-201ENST00000324238 BAZ2BQ9UIF8 2168 aaKnown RBP22.75■■□□□ 1.23
CRLF3-201ENST00000324238 TEX33O43247 280 aa22.75■■□□□ 1.23
CRLF3-201ENST00000324238 TFRCP02786 760 aaKnown RBP22.75■■□□□ 1.23
CRLF3-201ENST00000324238 PNMA6AP0CW24 399 aaPredicted RBP22.75■■□□□ 1.23
CRLF3-201ENST00000324238 NOM1Q5C9Z4 860 aaKnown RBP22.75■■□□□ 1.23
CRLF3-201ENST00000324238 CBFA2T2O43439 604 aa22.75■■□□□ 1.23
CRLF3-201ENST00000324238 MDM2Q00987 491 aaPredicted RBP22.75■■□□□ 1.23
CRLF3-201ENST00000324238 SLC4A8Q2Y0W8 1093 aa22.75■■□□□ 1.23
CRLF3-201ENST00000324238 DHX58Q96C10 678 aa22.75■■□□□ 1.23
CRLF3-201ENST00000324238 CCDC34Q96HJ3 373 aa22.75■■□□□ 1.23
CRLF3-201ENST00000324238 SOS2Q07890 1332 aaPredicted RBP22.75■■□□□ 1.23
CRLF3-201ENST00000324238 UBE3CQ15386 1083 aa22.74■■□□□ 1.23
CRLF3-201ENST00000324238 SUSD4Q5VX71 490 aa22.74■■□□□ 1.23
CRLF3-201ENST00000324238 MFSD6Q6ZSS7 791 aa22.74■■□□□ 1.23
CRLF3-201ENST00000324238 SPATA5Q8NB90 893 aa22.74■■□□□ 1.23
CRLF3-201ENST00000324238 SDR42E1Q8WUS8 393 aa22.74■■□□□ 1.23
CRLF3-201ENST00000324238 EPSTI1Q96J88 318 aa22.74■■□□□ 1.23
CRLF3-201ENST00000324238 LZTFL1Q9NQ48 299 aa22.74■■□□□ 1.23
CRLF3-201ENST00000324238 PLA2G4AP47712 749 aa22.74■■□□□ 1.23
CRLF3-201ENST00000324238 TRIM28Q13263 835 aaKnown RBP22.74■■□□□ 1.23
CRLF3-201ENST00000324238 EARS2Q5JPH6 523 aaKnown RBP22.74■■□□□ 1.23
CRLF3-201ENST00000324238 SLC4A4Q9Y6R1 1079 aa22.74■■□□□ 1.23
CRLF3-201ENST00000324238 GSG1L2A8MUP6 293 aa22.74■■□□□ 1.23
CRLF3-201ENST00000324238 CSRNP2Q9H175 543 aa22.74■■□□□ 1.23
CRLF3-201ENST00000324238 CYP2D7A0A087X1C5 515 aa22.73■■□□□ 1.23
CRLF3-201ENST00000324238 WNT7AO00755 349 aa22.73■■□□□ 1.23
CRLF3-201ENST00000324238 RTN1Q16799 776 aa22.73■■□□□ 1.23
CRLF3-201ENST00000324238 TC2NQ8N9U0 490 aa22.73■■□□□ 1.23
CRLF3-201ENST00000324238 TMEM87BQ96K49 555 aa22.73■■□□□ 1.23
CRLF3-201ENST00000324238 LMTK3Q96Q04 1460 aa22.73■■□□□ 1.23
CRLF3-201ENST00000324238 VPS54Q9P1Q0 977 aa22.73■■□□□ 1.23
CRLF3-201ENST00000324238 FBXO2Q9UK22 296 aaPredicted RBP22.73■■□□□ 1.23
CRLF3-201ENST00000324238 SOWAHDA6NJG2 315 aa22.73■■□□□ 1.23
CRLF3-201ENST00000324238 PATL2C9JE40 543 aaKnown RBP22.73■■□□□ 1.23
CRLF3-201ENST00000324238 MMP1P03956 469 aa22.73■■□□□ 1.23
CRLF3-201ENST00000324238 SAFBQ15424 915 aaKnown RBP eCLIP22.73■■□□□ 1.23
CRLF3-201ENST00000324238 CCDC24Q8N4L8 307 aa22.73■■□□□ 1.23
CRLF3-201ENST00000324238 EXOC5O00471 708 aa22.72■■□□□ 1.23
CRLF3-201ENST00000324238 BMS1Q14692 1282 aaKnown RBP22.72■■□□□ 1.23
CRLF3-201ENST00000324238 TTF1Q15361 905 aaPredicted RBP22.72■■□□□ 1.23
CRLF3-201ENST00000324238 BICDL1Q6ZP65 573 aa22.72■■□□□ 1.23
CRLF3-201ENST00000324238 SMARCE1Q969G3 411 aa22.72■■□□□ 1.23
CRLF3-201ENST00000324238 A0A087X0B3 334 aa22.72■■□□□ 1.23
CRLF3-201ENST00000324238 PDE8AO60658 829 aa22.72■■□□□ 1.23
CRLF3-201ENST00000324238 GYS2P54840 703 aa22.72■■□□□ 1.23
CRLF3-201ENST00000324238 AKNAD1Q5T1N1 836 aa22.72■■□□□ 1.23
CRLF3-201ENST00000324238 SHISA4Q96DD7 197 aa22.72■■□□□ 1.23
CRLF3-201ENST00000324238 NOL10Q9BSC4 688 aaKnown RBP22.72■■□□□ 1.23
CRLF3-201ENST00000324238 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.72■■□□□ 1.23
CRLF3-201ENST00000324238 TADA3O75528 432 aa22.71■■□□□ 1.23
CRLF3-201ENST00000324238 FMNL1O95466 1100 aaPredicted RBP22.71■■□□□ 1.23
CRLF3-201ENST00000324238 WTAPQ15007 396 aa22.71■■□□□ 1.23
CRLF3-201ENST00000324238 TEX13AQ9BXU3 409 aaPredicted RBP22.71■■□□□ 1.23
CRLF3-201ENST00000324238 MRPL44Q9H9J2 332 aaKnown RBP22.71■■□□□ 1.23
CRLF3-201ENST00000324238 A0A0U1RQG5 324 aaPredicted RBP22.71■■□□□ 1.23
CRLF3-201ENST00000324238 TMCO3Q6UWJ1 677 aa22.71■■□□□ 1.23
CRLF3-201ENST00000324238 FAM53CQ9NYF3 392 aa22.71■■□□□ 1.23
CRLF3-201ENST00000324238 LRP2BPQ9P2M1 347 aa22.71■■□□□ 1.23
CRLF3-201ENST00000324238 NUP188Q5SRE5 1749 aa22.71■■□□□ 1.23
CRLF3-201ENST00000324238 CASQ1P31415 396 aa22.71■■□□□ 1.23
CRLF3-201ENST00000324238 JAG2Q9Y219 1238 aa22.71■■□□□ 1.23
CRLF3-201ENST00000324238 EVX2Q03828 476 aa22.7■■□□□ 1.22
CRLF3-201ENST00000324238 SGMS1Q86VZ5 419 aa22.7■■□□□ 1.22
CRLF3-201ENST00000324238 PLA2G12BQ9BX93 195 aa22.7■■□□□ 1.22
CRLF3-201ENST00000324238 TRIM22Q8IYM9 498 aa22.7■■□□□ 1.22
CRLF3-201ENST00000324238 PHLPP2Q6ZVD8 1323 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms