RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 MAGEB6Q8N7X4 407 aa18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 IFIH1Q9BYX4 1025 aaKnown RBP18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 BIRC3Q13489 604 aa18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 PARP1P09874 1014 aaKnown RBP18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 ZNF445P59923 1031 aa18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 CCDC105Q8IYK2 499 aa18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 ADGBQ8N7X0 1667 aa18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 POLR2DO15514 142 aaKnown RBP18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 KRT71Q3SY84 523 aa18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 MLKLQ8NB16 471 aa18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 MRRFQ96E11 262 aaKnown RBP18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 WAPLQ7Z5K2 1190 aa18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 CSGALNACT2Q8N6G5 542 aa18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 PLS1Q14651 629 aa18.73■□□□□ 0.59
SMCHD1-201ENST00000320876 DNAJC8O75937 253 aaPredicted RBP18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 PEX26Q7Z412 305 aa18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 TRIM31Q9BZY9 425 aa18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 RIPOR2Q9Y4F9 1068 aa18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 IRX5P78411 483 aaPredicted RBP18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 SNCBQ16143 134 aa18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 VPS16Q9H269 839 aa18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 HGSO14964 777 aaPredicted RBP18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 EXOC7Q9UPT5 735 aa18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 DAPK3O43293 454 aa18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 STX2P32856 288 aa18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 MAIP1Q8WWC4 291 aa18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 USP26Q9BXU7 913 aa18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 TPX2Q9ULW0 747 aaKnown RBP18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 CTNNA1P35221 906 aaKnown RBP18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 RBBP5Q15291 538 aaKnown RBP18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 TAF12Q16514 161 aa18.72■□□□□ 0.59
SMCHD1-201ENST00000320876 CHST3Q7LGC8 479 aa18.71■□□□□ 0.59
SMCHD1-201ENST00000320876 GOLGA5Q8TBA6 731 aa18.71■□□□□ 0.59
SMCHD1-201ENST00000320876 FAM83GA6ND36 823 aa18.71■□□□□ 0.59
SMCHD1-201ENST00000320876 CCDC125Q86Z20 511 aa18.71■□□□□ 0.59
SMCHD1-201ENST00000320876 RASEFQ8IZ41 740 aa18.71■□□□□ 0.59
SMCHD1-201ENST00000320876 DEXIO95424 95 aa18.71■□□□□ 0.59
SMCHD1-201ENST00000320876 RPS6KA1Q15418 735 aa18.71■□□□□ 0.59
SMCHD1-201ENST00000320876 ANO1Q5XXA6 986 aa18.71■□□□□ 0.59
SMCHD1-201ENST00000320876 SAR1BQ9Y6B6 198 aa18.71■□□□□ 0.59
SMCHD1-201ENST00000320876 CCDC84Q86UT8 332 aaPredicted RBP18.71■□□□□ 0.59
SMCHD1-201ENST00000320876 TMCO4Q5TGY1 634 aa18.71■□□□□ 0.59
SMCHD1-201ENST00000320876 THOC2Q8NI27 1593 aaKnown RBP18.71■□□□□ 0.59
SMCHD1-201ENST00000320876 RPS6KB1P23443 525 aa18.71■□□□□ 0.58
SMCHD1-201ENST00000320876 OGFOD1Q8N543 542 aa18.71■□□□□ 0.58
SMCHD1-201ENST00000320876 STAG1Q8WVM7 1258 aa18.71■□□□□ 0.58
SMCHD1-201ENST00000320876 HOMER3Q9NSC5 361 aa18.71■□□□□ 0.58
SMCHD1-201ENST00000320876 NLRP12P59046 1061 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 PDE4DQ08499 809 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 CASC4Q6P4E1 433 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 GLT8D2Q9H1C3 349 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 CUTAO60888 179 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 CDAN1Q8IWY9 1227 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 TRIM58Q8NG06 486 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 HELLSQ9NRZ9 838 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 MSH6P52701 1360 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 RLBP1P12271 317 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 DBN1Q16643 649 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 ZNF202O95125 648 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 RFC4P35249 363 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 HSP90AA5PQ58FG0 334 aa18.7■□□□□ 0.58
SMCHD1-201ENST00000320876 TOPBP1Q92547 1522 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 POSTNQ15063 836 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 MCM9Q9NXL9 1143 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 GABPAQ06546 454 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 SFMBT2Q5VUG0 894 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 ADGRL1O94910 1474 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 VGLL3A8MV65 326 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 PICALMQ13492 652 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 KRT12Q99456 494 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 CAPS2Q9BXY5 557 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 KRT3P12035 628 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 PLEKHM2Q8IWE5 1019 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 CBX8Q9HC52 389 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 PLIN2Q99541 437 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 CHMLP26374 656 aa18.69■□□□□ 0.58
SMCHD1-201ENST00000320876 KIF1BO60333 1816 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 MGARPQ8TDB4 240 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 SDCCAG3Q96C92 435 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 DCTPP1Q9H773 170 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 CEP104O60308 925 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 KSR2Q6VAB6 950 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 MRPL50Q8N5N7 158 aaKnown RBP18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 ARHGAP42A6NI28 874 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 EVI5O60447 810 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 SPATS2LQ9NUQ6 558 aaKnown RBP18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 ZBTB21Q9ULJ3 1066 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 ZFYVE9O95405 1425 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 RPAINQ86UA6 219 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 FAM71BQ8TC56 605 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 CCDC51Q96ER9 411 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 RABEP2Q9H5N1 569 aa18.68■□□□□ 0.58
SMCHD1-201ENST00000320876 GNA14O95837 355 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 DCUN1D2Q6PH85 259 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 GRK7Q8WTQ7 553 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 XAB2Q9HCS7 855 aaKnown RBP18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 FAF1Q9UNN5 650 aaPredicted RBP18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 SLC12A2P55011 1212 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 RNF34Q969K3 372 aa18.67■□□□□ 0.58
SMCHD1-201ENST00000320876 LRRD1A4D1F6 860 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms