RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 DCP1AQ9NPI6 582 aaPredicted RBP20■□□□□ 0.79
LRRC42-201ENST00000319223 WBP1LQ9NX94 342 aa20■□□□□ 0.79
LRRC42-201ENST00000319223 CSADQ9Y600 493 aa20■□□□□ 0.79
LRRC42-201ENST00000319223 ZMYM1Q5SVZ6 1142 aa19.99■□□□□ 0.79
LRRC42-201ENST00000319223 OPTNQ96CV9 577 aa19.99■□□□□ 0.79
LRRC42-201ENST00000319223 MYH1P12882 1939 aa19.99■□□□□ 0.79
LRRC42-201ENST00000319223 HSPA1AP0DMV8 641 aaKnown RBP19.99■□□□□ 0.79
LRRC42-201ENST00000319223 HSPA1BP0DMV9 641 aaKnown RBP19.99■□□□□ 0.79
LRRC42-201ENST00000319223 PLCD1P51178 756 aa19.99■□□□□ 0.79
LRRC42-201ENST00000319223 CENPQQ7L2Z9 268 aaPredicted RBP19.99■□□□□ 0.79
LRRC42-201ENST00000319223 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.99■□□□□ 0.79
LRRC42-201ENST00000319223 SLC4A4Q9Y6R1 1079 aa19.99■□□□□ 0.79
LRRC42-201ENST00000319223 SMIM22K7EJ46 135 aa19.98■□□□□ 0.79
LRRC42-201ENST00000319223 GPAA1O43292 621 aa19.98■□□□□ 0.79
LRRC42-201ENST00000319223 CYP2D6P10635 497 aa19.98■□□□□ 0.79
LRRC42-201ENST00000319223 DDX60LQ5H9U9 1706 aaKnown RBP19.98■□□□□ 0.79
LRRC42-201ENST00000319223 METTL16Q86W50 562 aaKnown RBP19.98■□□□□ 0.79
LRRC42-201ENST00000319223 CCDC136Q96JN2 1154 aa19.98■□□□□ 0.79
LRRC42-201ENST00000319223 MCM9Q9NXL9 1143 aa19.98■□□□□ 0.79
LRRC42-201ENST00000319223 SPDYE5A6NIY4 337 aa19.97■□□□□ 0.79
LRRC42-201ENST00000319223 GSPT1P15170 499 aaKnown RBP19.97■□□□□ 0.79
LRRC42-201ENST00000319223 FOXP4Q8IVH2 680 aaPredicted RBP19.97■□□□□ 0.79
LRRC42-201ENST00000319223 OTUD5Q96G74 571 aa19.97■□□□□ 0.79
LRRC42-201ENST00000319223 NAV1Q8NEY1 1877 aa19.97■□□□□ 0.79
LRRC42-201ENST00000319223 MAP2K1Q02750 393 aaPredicted RBP19.96■□□□□ 0.79
LRRC42-201ENST00000319223 SHROOM1Q2M3G4 852 aaPredicted RBP19.96■□□□□ 0.79
LRRC42-201ENST00000319223 LRRFIP1Q32MZ4 808 aaKnown RBP19.96■□□□□ 0.79
LRRC42-201ENST00000319223 NOL9Q5SY16 702 aaKnown RBP19.96■□□□□ 0.79
LRRC42-201ENST00000319223 CCDC129Q6ZRS4 1044 aa19.96■□□□□ 0.79
LRRC42-201ENST00000319223 FAM227BQ96M60 508 aa19.96■□□□□ 0.79
LRRC42-201ENST00000319223 HERC5Q9UII4 1024 aaKnown RBP19.96■□□□□ 0.79
LRRC42-201ENST00000319223 CYP2D7A0A087X1C5 515 aa19.96■□□□□ 0.79
LRRC42-201ENST00000319223 GSG1L2A8MUP6 293 aa19.96■□□□□ 0.79
LRRC42-201ENST00000319223 POLR3DP05423 398 aaPredicted RBP19.96■□□□□ 0.79
LRRC42-201ENST00000319223 HLA-DOAP06340 250 aa19.96■□□□□ 0.79
LRRC42-201ENST00000319223 ZBTB48P10074 688 aaPredicted RBP19.96■□□□□ 0.79
LRRC42-201ENST00000319223 JAG1P78504 1218 aa19.96■□□□□ 0.79
LRRC42-201ENST00000319223 TTC22Q5TAA0 569 aa19.96■□□□□ 0.79
LRRC42-201ENST00000319223 CCDC84Q86UT8 332 aaPredicted RBP19.96■□□□□ 0.79
LRRC42-201ENST00000319223 SCYL3Q8IZE3 742 aa19.96■□□□□ 0.79
LRRC42-201ENST00000319223 ATP8A2Q9NTI2 1148 aa19.96■□□□□ 0.79
LRRC42-201ENST00000319223 BAZ2AQ9UIF9 1905 aaKnown RBP19.95■□□□□ 0.78
LRRC42-201ENST00000319223 FOXN1O15353 648 aa19.95■□□□□ 0.78
LRRC42-201ENST00000319223 TTC6Q86TZ1 520 aa19.95■□□□□ 0.78
LRRC42-201ENST00000319223 ERO1BQ86YB8 467 aa19.95■□□□□ 0.78
LRRC42-201ENST00000319223 CRACR2BQ8N4Y2 399 aaPredicted RBP19.95■□□□□ 0.78
LRRC42-201ENST00000319223 A0A0D9SFI3 127 aa19.94■□□□□ 0.78
LRRC42-201ENST00000319223 IRF6O14896 467 aa19.94■□□□□ 0.78
LRRC42-201ENST00000319223 CTNND1O60716 968 aaKnown RBP19.94■□□□□ 0.78
LRRC42-201ENST00000319223 MS4A4AQ96JQ5 239 aa19.94■□□□□ 0.78
LRRC42-201ENST00000319223 USP17L12C9JPN9 530 aa19.93■□□□□ 0.78
LRRC42-201ENST00000319223 USP17L21D6R901 530 aa19.93■□□□□ 0.78
LRRC42-201ENST00000319223 SDSP20132 328 aa19.93■□□□□ 0.78
LRRC42-201ENST00000319223 CAP2P40123 477 aa19.93■□□□□ 0.78
LRRC42-201ENST00000319223 TM4SF4P48230 202 aa19.93■□□□□ 0.78
LRRC42-201ENST00000319223 NMIQ13287 307 aaPredicted RBP19.93■□□□□ 0.78
LRRC42-201ENST00000319223 EHD4Q9H223 541 aa19.93■□□□□ 0.78
LRRC42-201ENST00000319223 EPB41L4AQ9HCS5 686 aaPredicted RBP19.93■□□□□ 0.78
LRRC42-201ENST00000319223 SERPINB13Q9UIV8 391 aa19.93■□□□□ 0.78
LRRC42-201ENST00000319223 PTPRAP18433 802 aa19.93■□□□□ 0.78
LRRC42-201ENST00000319223 GABPAQ06546 454 aa19.93■□□□□ 0.78
LRRC42-201ENST00000319223 CTR9Q6PD62 1173 aa19.93■□□□□ 0.78
LRRC42-201ENST00000319223 TSKSQ9UJT2 592 aa19.93■□□□□ 0.78
LRRC42-201ENST00000319223 FOXP2O15409 715 aa19.92■□□□□ 0.78
LRRC42-201ENST00000319223 PPATQ06203 517 aa19.92■□□□□ 0.78
LRRC42-201ENST00000319223 PPIL2Q13356 520 aa19.92■□□□□ 0.78
LRRC42-201ENST00000319223 DYNLL2Q96FJ2 89 aa19.92■□□□□ 0.78
LRRC42-201ENST00000319223 PTPN18Q99952 460 aa19.92■□□□□ 0.78
LRRC42-201ENST00000319223 TRIM34Q9BYJ4 488 aa19.92■□□□□ 0.78
LRRC42-201ENST00000319223 RNF186Q9NXI6 227 aa19.92■□□□□ 0.78
LRRC42-201ENST00000319223 DOCK1Q14185 1865 aa19.91■□□□□ 0.78
LRRC42-201ENST00000319223 MANSC4A6NHS7 340 aaPredicted RBP19.91■□□□□ 0.78
LRRC42-201ENST00000319223 PATL2C9JE40 543 aaKnown RBP19.91■□□□□ 0.78
LRRC42-201ENST00000319223 GDF11O95390 407 aa19.91■□□□□ 0.78
LRRC42-201ENST00000319223 SHMT1P34896 483 aa19.91■□□□□ 0.78
LRRC42-201ENST00000319223 C12orf60Q5U649 245 aa19.91■□□□□ 0.78
LRRC42-201ENST00000319223 VPS53Q5VIR6 699 aa19.91■□□□□ 0.78
LRRC42-201ENST00000319223 TATDN1Q6P1N9 297 aa19.91■□□□□ 0.78
LRRC42-201ENST00000319223 SLC44A5Q8NCS7 719 aa19.91■□□□□ 0.78
LRRC42-201ENST00000319223 HELLSQ9NRZ9 838 aa19.91■□□□□ 0.78
LRRC42-201ENST00000319223 ZHX2Q9Y6X8 837 aa19.91■□□□□ 0.78
LRRC42-201ENST00000319223 IGF2BP3O00425 579 aaKnown RBP eCLIP19.9■□□□□ 0.78
LRRC42-201ENST00000319223 ZNF589Q86UQ0 364 aaPredicted RBP19.9■□□□□ 0.78
LRRC42-201ENST00000319223 BRI3BPQ8WY22 251 aa19.9■□□□□ 0.78
LRRC42-201ENST00000319223 PICK1Q9NRD5 415 aa19.9■□□□□ 0.78
LRRC42-201ENST00000319223 LAMB1P07942 1786 aa19.9■□□□□ 0.78
LRRC42-201ENST00000319223 TESPA1A2RU30 521 aaPredicted RBP19.9■□□□□ 0.78
LRRC42-201ENST00000319223 TRPA1O75762 1119 aa19.9■□□□□ 0.78
LRRC42-201ENST00000319223 APPP05067 770 aa19.9■□□□□ 0.78
LRRC42-201ENST00000319223 GNAT2P19087 354 aa19.9■□□□□ 0.78
LRRC42-201ENST00000319223 SREBF2Q12772 1141 aa19.9■□□□□ 0.78
LRRC42-201ENST00000319223 MCMDC2Q4G0Z9 681 aa19.9■□□□□ 0.78
LRRC42-201ENST00000319223 TICAM2Q86XR7 235 aa19.9■□□□□ 0.78
LRRC42-201ENST00000319223 REM2Q8IYK8 340 aaPredicted RBP19.9■□□□□ 0.78
LRRC42-201ENST00000319223 IFNL3Q8IZI9 196 aa19.9■□□□□ 0.78
LRRC42-201ENST00000319223 BEGAINQ9BUH8 593 aa19.9■□□□□ 0.78
LRRC42-201ENST00000319223 GIMAP6Q6P9H5 292 aa19.89■□□□□ 0.77
LRRC42-201ENST00000319223 IFNL1Q8IU54 200 aa19.89■□□□□ 0.77
LRRC42-201ENST00000319223 AFG3L2Q9Y4W6 797 aa19.89■□□□□ 0.77
LRRC42-201ENST00000319223 PHIPQ8WWQ0 1821 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms