RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 BEND3Q5T5X7 828 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 NLRP3Q96P20 1036 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 MED15Q96RN5 788 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 USP28Q96RU2 1077 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 SRP68Q9UHB9 627 aaKnown RBP4.13□□□□□ -1.75
GEN1-201ENST00000317402 PEAK1Q9H792 1746 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 PHRF1Q9P1Y6 1649 aaKnown RBP4.13□□□□□ -1.75
GEN1-201ENST00000317402 PDCD11Q14690 1871 aaKnown RBP4.13□□□□□ -1.75
GEN1-201ENST00000317402 ALKQ9UM73 1620 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 AOPEPQ8N6M6 819 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 SORBS3O60504 671 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 DNA2P51530 1060 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 LLGL1Q15334 1064 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 DLK2Q6UY11 383 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 TAX1BP1Q86VP1 789 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 RASGRP4Q8TDF6 673 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 LRRCC1Q9C099 1032 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 BTG4Q9NY30 223 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 JCADQ9P266 1359 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 A0A1B0GUA9 196 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 SHTN1A0MZ66 631 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 PP2D1A8MPX8 630 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 CYP27B1O15528 508 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 CYP21A2P08686 494 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 CABP4P57796 275 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 EAPPQ56P03 285 aaPredicted RBP4.13□□□□□ -1.75
GEN1-201ENST00000317402 C1orf141Q5JVX7 400 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 FUCA2Q9BTY2 467 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 DBNLQ9UJU6 430 aaKnown RBP4.13□□□□□ -1.75
GEN1-201ENST00000317402 TNRQ92752 1358 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 CALCAP01258 141 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 ADD1P35611 737 aaKnown RBP4.13□□□□□ -1.75
GEN1-201ENST00000317402 CREB3L3Q68CJ9 461 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 LBHD1Q9BQE6 289 aaPredicted RBP4.13□□□□□ -1.75
GEN1-201ENST00000317402 BLZF1Q9H2G9 400 aa4.13□□□□□ -1.75
GEN1-201ENST00000317402 ERC2O15083 957 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 GCKP35557 465 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 SYT10Q6XYQ8 523 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 MICALL1Q8N3F8 863 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 PPP1R9BQ96SB3 815 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 MROH7-TTC4A0A0A0MT08 1334 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 KIF1CO43896 1103 aaKnown RBP4.12□□□□□ -1.75
GEN1-201ENST00000317402 ADKP55263 362 aaKnown RBP4.12□□□□□ -1.75
GEN1-201ENST00000317402 ATP8B2P98198 1209 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 MSL1Q68DK7 614 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 ADGRA1Q86SQ6 560 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 SPATS2LQ9NUQ6 558 aaKnown RBP4.12□□□□□ -1.75
GEN1-201ENST00000317402 CLIP2Q9UDT6 1046 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 TTC21AQ8NDW8 1320 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 TUBGCP6Q96RT7 1819 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 LGR5O75473 907 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 MCM5P33992 734 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 SEPT6Q14141 434 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 DPCR1Q3MIW9 517 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 NBPF3Q9H094 633 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 NBPF26B4DH59 902 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 TRIM66O15016 1216 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 EZRP15311 586 aaKnown RBP4.12□□□□□ -1.75
GEN1-201ENST00000317402 NCBP1Q09161 790 aaKnown RBP4.12□□□□□ -1.75
GEN1-201ENST00000317402 WASHC4Q2M389 1173 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 NBPF14Q5TI25 921 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 NBPF10Q6P3W6 841 aaKnown RBP4.12□□□□□ -1.75
GEN1-201ENST00000317402 KIRREL3Q8IZU9 778 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 NBPF15Q8N660 670 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 ARHGAP32A7KAX9 2087 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 SRGAP2O75044 1071 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 INTS3Q68E01 1043 aaKnown RBP4.12□□□□□ -1.75
GEN1-201ENST00000317402 TMCO3Q6UWJ1 677 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 OSBP2Q969R2 916 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 CCDC102AQ96A19 550 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 C3P01024 1663 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 A0A087WZG4 1122 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 EIF3DO15371 548 aaKnown RBP eCLIP4.12□□□□□ -1.75
GEN1-201ENST00000317402 F13A1P00488 732 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 MCM2P49736 904 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 RNF187Q5TA31 235 aaPredicted RBP4.12□□□□□ -1.75
GEN1-201ENST00000317402 TMCO4Q5TGY1 634 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 TMC4Q7Z404 712 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 FOXP4Q8IVH2 680 aaPredicted RBP4.12□□□□□ -1.75
GEN1-201ENST00000317402 BABAM1Q9NWV8 329 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 MRFAP1Q9Y605 127 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 KIF2AO00139 706 aaPredicted RBP4.12□□□□□ -1.75
GEN1-201ENST00000317402 GNAI2P04899 355 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 MYBL1P10243 752 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 CYP2D6P10635 497 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 DYNLL1P63167 89 aaKnown RBP4.12□□□□□ -1.75
GEN1-201ENST00000317402 NBPF11Q86T75 865 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 PSMB7Q99436 277 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 FSD1Q9BTV5 496 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 AATKQ6ZMQ8 1374 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 PTPRQQ9UMZ3 2332 aa4.12□□□□□ -1.75
GEN1-201ENST00000317402 RIF1Q5UIP0 2472 aaKnown RBP4.12□□□□□ -1.75
GEN1-201ENST00000317402 ZNF500O60304 480 aaPredicted RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 ZAP70P43403 619 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 KMT5BQ4FZB7 885 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 CHORDC1Q9UHD1 332 aaPredicted RBP4.11□□□□□ -1.75
GEN1-201ENST00000317402 UBR1Q8IWV7 1749 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 TTC36A6NLP5 189 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 PHACTR2O75167 634 aa4.11□□□□□ -1.75
GEN1-201ENST00000317402 RGS22Q8NE09 1264 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms