RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 PSMC4P43686 418 aa19.03■□□□□ 0.64
FOXR1-201ENST00000317011 HSP90AB4PQ58FF6 505 aa19.03■□□□□ 0.64
FOXR1-201ENST00000317011 TMED8Q6PL24 325 aaPredicted RBP19.03■□□□□ 0.64
FOXR1-201ENST00000317011 TRIM47Q96LD4 638 aa19.03■□□□□ 0.64
FOXR1-201ENST00000317011 PARK7Q99497 189 aaKnown RBP19.03■□□□□ 0.64
FOXR1-201ENST00000317011 TBC1D2Q9BYX2 928 aa19.03■□□□□ 0.64
FOXR1-201ENST00000317011 SRRDQ9UH36 339 aa19.03■□□□□ 0.64
FOXR1-201ENST00000317011 EXOC6BQ9Y2D4 811 aa19.03■□□□□ 0.64
FOXR1-201ENST00000317011 MKI67P46013 3256 aaKnown RBP19.03■□□□□ 0.64
FOXR1-201ENST00000317011 FAM196BA6NMK8 535 aa19.02■□□□□ 0.64
FOXR1-201ENST00000317011 RHPN1Q8TCX5 695 aa19.02■□□□□ 0.64
FOXR1-201ENST00000317011 TGFBRAP1Q8WUH2 860 aa19.02■□□□□ 0.64
FOXR1-201ENST00000317011 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.02■□□□□ 0.64
FOXR1-201ENST00000317011 EN2P19622 333 aaPredicted RBP19.01■□□□□ 0.63
FOXR1-201ENST00000317011 HOXD10P28358 340 aa19.01■□□□□ 0.63
FOXR1-201ENST00000317011 SLC9C1Q4G0N8 1177 aa19.01■□□□□ 0.63
FOXR1-201ENST00000317011 SH3D19Q5HYK7 790 aa19.01■□□□□ 0.63
FOXR1-201ENST00000317011 CCDC84Q86UT8 332 aaPredicted RBP19.01■□□□□ 0.63
FOXR1-201ENST00000317011 NOL10Q9BSC4 688 aaKnown RBP19.01■□□□□ 0.63
FOXR1-201ENST00000317011 DDX19BQ9UMR2 479 aa19.01■□□□□ 0.63
FOXR1-201ENST00000317011 TRIM75PA6NK02 468 aa19■□□□□ 0.63
FOXR1-201ENST00000317011 OSBPP22059 807 aa19■□□□□ 0.63
FOXR1-201ENST00000317011 PROCA1Q8NCQ7 364 aaPredicted RBP19■□□□□ 0.63
FOXR1-201ENST00000317011 ZNF280CQ8ND82 737 aa19■□□□□ 0.63
FOXR1-201ENST00000317011 WDR18Q9BV38 432 aa19■□□□□ 0.63
FOXR1-201ENST00000317011 ANTXR1Q9H6X2 564 aa19■□□□□ 0.63
FOXR1-201ENST00000317011 DNAJC18Q9H819 358 aa19■□□□□ 0.63
FOXR1-201ENST00000317011 AGTPBP1Q9UPW5 1226 aa19■□□□□ 0.63
FOXR1-201ENST00000317011 DOCK2Q92608 1830 aa19■□□□□ 0.63
FOXR1-201ENST00000317011 FLT1P17948 1338 aa19■□□□□ 0.63
FOXR1-201ENST00000317011 USP17L5A8MUK1 530 aa18.99■□□□□ 0.63
FOXR1-201ENST00000317011 CYP7A1P22680 504 aa18.99■□□□□ 0.63
FOXR1-201ENST00000317011 DYNLL1P63167 89 aaKnown RBP18.99■□□□□ 0.63
FOXR1-201ENST00000317011 JAG1P78504 1218 aa18.99■□□□□ 0.63
FOXR1-201ENST00000317011 SPP2Q13103 211 aa18.99■□□□□ 0.63
FOXR1-201ENST00000317011 PRPF38BQ5VTL8 546 aaKnown RBP18.99■□□□□ 0.63
FOXR1-201ENST00000317011 GADL1Q6ZQY3 521 aa18.99■□□□□ 0.63
FOXR1-201ENST00000317011 AACSQ86V21 672 aa18.99■□□□□ 0.63
FOXR1-201ENST00000317011 MAPKAPK5Q8IW41 473 aa18.99■□□□□ 0.63
FOXR1-201ENST00000317011 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.99■□□□□ 0.63
FOXR1-201ENST00000317011 GINM1Q9NU53 330 aa18.99■□□□□ 0.63
FOXR1-201ENST00000317011 RCAN3Q9UKA8 241 aa18.99■□□□□ 0.63
FOXR1-201ENST00000317011 COG6Q9Y2V7 657 aa18.99■□□□□ 0.63
FOXR1-201ENST00000317011 CERS3Q8IU89 383 aa18.98■□□□□ 0.63
FOXR1-201ENST00000317011 TMEM106CQ9BVX2 250 aa18.98■□□□□ 0.63
FOXR1-201ENST00000317011 PALD1Q9ULE6 856 aa18.98■□□□□ 0.63
FOXR1-201ENST00000317011 NDUFB9Q9Y6M9 179 aa18.98■□□□□ 0.63
FOXR1-201ENST00000317011 PHIPQ8WWQ0 1821 aa18.97■□□□□ 0.63
FOXR1-201ENST00000317011 FMNL1O95466 1100 aaPredicted RBP18.97■□□□□ 0.63
FOXR1-201ENST00000317011 TREML2Q5T2D2 321 aa18.97■□□□□ 0.63
FOXR1-201ENST00000317011 SH3TC2Q8TF17 1288 aa18.97■□□□□ 0.63
FOXR1-201ENST00000317011 KIF1BPQ96EK5 621 aa18.97■□□□□ 0.63
FOXR1-201ENST00000317011 CHMP4BQ9H444 224 aaKnown RBP18.97■□□□□ 0.63
FOXR1-201ENST00000317011 IL1RAPL2Q9NP60 686 aa18.97■□□□□ 0.63
FOXR1-201ENST00000317011 RAB11FIP3O75154 756 aa18.96■□□□□ 0.63
FOXR1-201ENST00000317011 HMMRO75330 724 aa18.96■□□□□ 0.63
FOXR1-201ENST00000317011 IDH1O75874 414 aaKnown RBP18.96■□□□□ 0.63
FOXR1-201ENST00000317011 FCGRTP55899 365 aa18.96■□□□□ 0.63
FOXR1-201ENST00000317011 MAP3K12Q12852 859 aa18.96■□□□□ 0.63
FOXR1-201ENST00000317011 PDE3AQ14432 1141 aa18.96■□□□□ 0.63
FOXR1-201ENST00000317011 MAGEB6Q8N7X4 407 aa18.96■□□□□ 0.63
FOXR1-201ENST00000317011 RIOK1Q9BRS2 568 aaKnown RBP18.96■□□□□ 0.63
FOXR1-201ENST00000317011 SLC34A2O95436 690 aa18.95■□□□□ 0.62
FOXR1-201ENST00000317011 ASNSP08243 561 aa18.95■□□□□ 0.62
FOXR1-201ENST00000317011 BACE1P56817 501 aa18.95■□□□□ 0.62
FOXR1-201ENST00000317011 TATDN1Q6P1N9 297 aa18.95■□□□□ 0.62
FOXR1-201ENST00000317011 CLASRPQ8N2M8 674 aaKnown RBP18.95■□□□□ 0.62
FOXR1-201ENST00000317011 HOXA7P31268 230 aaPredicted RBP18.94■□□□□ 0.62
FOXR1-201ENST00000317011 GRK4P32298 578 aa18.94■□□□□ 0.62
FOXR1-201ENST00000317011 HMGCS2P54868 508 aa18.94■□□□□ 0.62
FOXR1-201ENST00000317011 TTF1Q15361 905 aaPredicted RBP18.94■□□□□ 0.62
FOXR1-201ENST00000317011 MIGA1Q8NAN2 632 aa18.94■□□□□ 0.62
FOXR1-201ENST00000317011 AS3MTQ9HBK9 375 aa18.94■□□□□ 0.62
FOXR1-201ENST00000317011 GABRQQ9UN88 632 aa18.94■□□□□ 0.62
FOXR1-201ENST00000317011 DOCK1Q14185 1865 aa18.94■□□□□ 0.62
FOXR1-201ENST00000317011 MYPNQ86TC9 1320 aa18.94■□□□□ 0.62
FOXR1-201ENST00000317011 ZSWIM8A7E2V4 1837 aa18.93■□□□□ 0.62
FOXR1-201ENST00000317011 C19orf81C9J6K1 198 aa18.93■□□□□ 0.62
FOXR1-201ENST00000317011 PRKCZQ05513 592 aa18.93■□□□□ 0.62
FOXR1-201ENST00000317011 MTFR1Q15390 333 aa18.93■□□□□ 0.62
FOXR1-201ENST00000317011 FAM110CQ1W6H9 321 aa18.93■□□□□ 0.62
FOXR1-201ENST00000317011 RAET1EQ8TD07 263 aa18.93■□□□□ 0.62
FOXR1-201ENST00000317011 EHD4Q9H223 541 aa18.93■□□□□ 0.62
FOXR1-201ENST00000317011 PNMA3Q9UL41 463 aa18.93■□□□□ 0.62
FOXR1-201ENST00000317011 PTPRFP10586 1907 aa18.93■□□□□ 0.62
FOXR1-201ENST00000317011 RBBP6Q7Z6E9 1792 aaKnown RBP18.93■□□□□ 0.62
FOXR1-201ENST00000317011 MYO5AQ9Y4I1 1855 aaKnown RBP18.92■□□□□ 0.62
FOXR1-201ENST00000317011 TCRBV5S4A2TA0A5A2 114 aa18.92■□□□□ 0.62
FOXR1-201ENST00000317011 GCLCP48506 637 aaPredicted RBP18.92■□□□□ 0.62
FOXR1-201ENST00000317011 PABPC4Q13310 644 aaKnown RBP eCLIP18.92■□□□□ 0.62
FOXR1-201ENST00000317011 IRF5Q13568 498 aa18.92■□□□□ 0.62
FOXR1-201ENST00000317011 SHROOM1Q2M3G4 852 aaPredicted RBP18.92■□□□□ 0.62
FOXR1-201ENST00000317011 SLC4A8Q2Y0W8 1093 aa18.92■□□□□ 0.62
FOXR1-201ENST00000317011 C20orf194Q5TEA3 1177 aa18.92■□□□□ 0.62
FOXR1-201ENST00000317011 SMCR8Q8TEV9 937 aaPredicted RBP18.92■□□□□ 0.62
FOXR1-201ENST00000317011 ASCC2Q9H1I8 757 aaPredicted RBP18.92■□□□□ 0.62
FOXR1-201ENST00000317011 SAP30BPQ9UHR5 308 aaKnown RBP18.92■□□□□ 0.62
FOXR1-201ENST00000317011 SIPA1L1O43166 1804 aa18.91■□□□□ 0.62
FOXR1-201ENST00000317011 ECM2O94769 699 aaPredicted RBP18.91■□□□□ 0.62
FOXR1-201ENST00000317011 HLA-DOAP06340 250 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms