RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 PI16Q6UXB8 463 aa14.78□□□□□ -0.04
ABCD3-201ENST00000315713 DZIP1Q86YF9 867 aaKnown RBP14.78□□□□□ -0.04
ABCD3-201ENST00000315713 RAET1EQ8TD07 263 aa14.78□□□□□ -0.04
ABCD3-201ENST00000315713 DCTPP1Q9H773 170 aa14.78□□□□□ -0.04
ABCD3-201ENST00000315713 SNRKQ9NRH2 765 aa14.78□□□□□ -0.04
ABCD3-201ENST00000315713 FMNL1O95466 1100 aaPredicted RBP14.77□□□□□ -0.05
ABCD3-201ENST00000315713 CYP2C8P10632 490 aa14.77□□□□□ -0.05
ABCD3-201ENST00000315713 GRK4P32298 578 aa14.77□□□□□ -0.05
ABCD3-201ENST00000315713 IRX6P78412 446 aaPredicted RBP14.77□□□□□ -0.05
ABCD3-201ENST00000315713 PRKCZQ05513 592 aa14.77□□□□□ -0.05
ABCD3-201ENST00000315713 CHRDL2Q6WN34 429 aa14.77□□□□□ -0.05
ABCD3-201ENST00000315713 ERICH6Q7L0X2 663 aa14.77□□□□□ -0.05
ABCD3-201ENST00000315713 ZFPM1Q8IX07 1006 aa14.77□□□□□ -0.05
ABCD3-201ENST00000315713 ZNF512BQ96KM6 892 aaPredicted RBP14.77□□□□□ -0.05
ABCD3-201ENST00000315713 PARK7Q99497 189 aaKnown RBP14.77□□□□□ -0.05
ABCD3-201ENST00000315713 COL6A3P12111 3177 aa14.76□□□□□ -0.05
ABCD3-201ENST00000315713 DDX60LQ5H9U9 1706 aaKnown RBP14.76□□□□□ -0.05
ABCD3-201ENST00000315713 SMARCA5O60264 1052 aaPredicted RBP14.76□□□□□ -0.05
ABCD3-201ENST00000315713 BCRP11274 1271 aa14.76□□□□□ -0.05
ABCD3-201ENST00000315713 CCL5P13501 91 aa14.76□□□□□ -0.05
ABCD3-201ENST00000315713 GPAT2Q6NUI2 795 aa14.76□□□□□ -0.05
ABCD3-201ENST00000315713 TBC1D9Q6ZT07 1266 aa14.76□□□□□ -0.05
ABCD3-201ENST00000315713 USP40Q9NVE5 1235 aa14.76□□□□□ -0.05
ABCD3-201ENST00000315713 FRMPD3Q5JV73 1810 aa14.76□□□□□ -0.05
ABCD3-201ENST00000315713 HOXD10P28358 340 aa14.75□□□□□ -0.05
ABCD3-201ENST00000315713 RGS3P49796 1198 aa14.75□□□□□ -0.05
ABCD3-201ENST00000315713 FCGRTP55899 365 aa14.75□□□□□ -0.05
ABCD3-201ENST00000315713 SLF2Q8IX21 1173 aa14.75□□□□□ -0.05
ABCD3-201ENST00000315713 RAI14Q9P0K7 980 aa14.75□□□□□ -0.05
ABCD3-201ENST00000315713 LRP2BPQ9P2M1 347 aa14.75□□□□□ -0.05
ABCD3-201ENST00000315713 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.75□□□□□ -0.05
ABCD3-201ENST00000315713 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
ABCD3-201ENST00000315713 GABRQQ9UN88 632 aa14.75□□□□□ -0.05
ABCD3-201ENST00000315713 GAKO14976 1311 aa14.74□□□□□ -0.05
ABCD3-201ENST00000315713 PHF20L1A8MW92 1017 aa14.74□□□□□ -0.05
ABCD3-201ENST00000315713 SLURP2P0DP57 97 aa14.74□□□□□ -0.05
ABCD3-201ENST00000315713 ZAP70P43403 619 aa14.74□□□□□ -0.05
ABCD3-201ENST00000315713 GJA8P48165 433 aa14.74□□□□□ -0.05
ABCD3-201ENST00000315713 MAPK8IP2Q13387 824 aaPredicted RBP14.74□□□□□ -0.05
ABCD3-201ENST00000315713 UBE2Q1Q7Z7E8 422 aa14.74□□□□□ -0.05
ABCD3-201ENST00000315713 SCYL3Q8IZE3 742 aa14.74□□□□□ -0.05
ABCD3-201ENST00000315713 DPF3Q92784 378 aa14.74□□□□□ -0.05
ABCD3-201ENST00000315713 RNF208Q9H0X6 261 aa14.74□□□□□ -0.05
ABCD3-201ENST00000315713 BIN2Q9UBW5 565 aaPredicted RBP14.74□□□□□ -0.05
ABCD3-201ENST00000315713 A0A0G2JLL6 359 aaPredicted RBP14.73□□□□□ -0.05
ABCD3-201ENST00000315713 GJB1P08034 283 aa14.73□□□□□ -0.05
ABCD3-201ENST00000315713 PTPRAP18433 802 aa14.73□□□□□ -0.05
ABCD3-201ENST00000315713 MECOMQ03112 1051 aa14.73□□□□□ -0.05
ABCD3-201ENST00000315713 HDAC1Q13547 482 aaPredicted RBP14.73□□□□□ -0.05
ABCD3-201ENST00000315713 GADL1Q6ZQY3 521 aa14.73□□□□□ -0.05
ABCD3-201ENST00000315713 SH3BP5LQ7L8J4 393 aa14.73□□□□□ -0.05
ABCD3-201ENST00000315713 PRRT2Q7Z6L0 340 aaPredicted RBP14.73□□□□□ -0.05
ABCD3-201ENST00000315713 NKX2-3Q8TAU0 364 aa14.73□□□□□ -0.05
ABCD3-201ENST00000315713 UNC93B1Q9H1C4 597 aa14.73□□□□□ -0.05
ABCD3-201ENST00000315713 PICK1Q9NRD5 415 aa14.73□□□□□ -0.05
ABCD3-201ENST00000315713 RBM27Q9P2N5 1060 aaKnown RBP14.73□□□□□ -0.05
ABCD3-201ENST00000315713 CXCL11O14625 94 aa14.72□□□□□ -0.05
ABCD3-201ENST00000315713 FARP2O94887 1054 aaPredicted RBP14.72□□□□□ -0.05
ABCD3-201ENST00000315713 CYP2E1P05181 493 aaPredicted RBP14.72□□□□□ -0.05
ABCD3-201ENST00000315713 UBXN2AP68543 259 aa14.72□□□□□ -0.05
ABCD3-201ENST00000315713 GSTO1P78417 241 aa14.72□□□□□ -0.05
ABCD3-201ENST00000315713 CCDC84Q86UT8 332 aaPredicted RBP14.72□□□□□ -0.05
ABCD3-201ENST00000315713 ZSCAN29Q8IWY8 852 aaPredicted RBP14.72□□□□□ -0.05
ABCD3-201ENST00000315713 SLAIN1Q8ND83 568 aa14.72□□□□□ -0.05
ABCD3-201ENST00000315713 IDI2Q9BXS1 227 aa14.72□□□□□ -0.05
ABCD3-201ENST00000315713 RWDD1Q9H446 243 aaPredicted RBP14.72□□□□□ -0.05
ABCD3-201ENST00000315713 DDX4Q9NQI0 724 aaKnown RBP14.72□□□□□ -0.05
ABCD3-201ENST00000315713 NDUFB9Q9Y6M9 179 aa14.72□□□□□ -0.05
ABCD3-201ENST00000315713 ZHX2Q9Y6X8 837 aa14.72□□□□□ -0.05
ABCD3-201ENST00000315713 MYH1P12882 1939 aa14.72□□□□□ -0.05
ABCD3-201ENST00000315713 MROH7-TTC4A0A0A0MT08 1334 aa14.71□□□□□ -0.05
ABCD3-201ENST00000315713 MYH7P12883 1935 aa14.71□□□□□ -0.05
ABCD3-201ENST00000315713 DDTLA6NHG4 134 aaPredicted RBP14.71□□□□□ -0.05
ABCD3-201ENST00000315713 ENTPD3O75355 529 aa14.71□□□□□ -0.05
ABCD3-201ENST00000315713 LDHCP07864 332 aa14.71□□□□□ -0.05
ABCD3-201ENST00000315713 ELNP15502 786 aa14.71□□□□□ -0.05
ABCD3-201ENST00000315713 PICALMQ13492 652 aa14.71□□□□□ -0.05
ABCD3-201ENST00000315713 U2AF1L4Q8WU68 220 aaKnown RBP14.71□□□□□ -0.05
ABCD3-201ENST00000315713 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.71□□□□□ -0.05
ABCD3-201ENST00000315713 NSUN4Q96CB9 384 aaKnown RBP14.71□□□□□ -0.05
ABCD3-201ENST00000315713 GPATCH3Q96I76 525 aa14.71□□□□□ -0.05
ABCD3-201ENST00000315713 DNAJC2Q99543 621 aaKnown RBP14.71□□□□□ -0.05
ABCD3-201ENST00000315713 HTATIP2Q9BUP3 242 aa14.71□□□□□ -0.05
ABCD3-201ENST00000315713 AFG3L2Q9Y4W6 797 aa14.71□□□□□ -0.05
ABCD3-201ENST00000315713 TRIM75PA6NK02 468 aa14.7□□□□□ -0.06
ABCD3-201ENST00000315713 ADCY3O60266 1144 aa14.7□□□□□ -0.06
ABCD3-201ENST00000315713 IDH1O75874 414 aaKnown RBP14.7□□□□□ -0.06
ABCD3-201ENST00000315713 INHAP05111 366 aa14.7□□□□□ -0.06
ABCD3-201ENST00000315713 BTDP43251 543 aa14.7□□□□□ -0.06
ABCD3-201ENST00000315713 TTF1Q15361 905 aaPredicted RBP14.7□□□□□ -0.06
ABCD3-201ENST00000315713 ANKRD45Q5TZF3 282 aa14.7□□□□□ -0.06
ABCD3-201ENST00000315713 NAA16Q6N069 864 aaPredicted RBP14.7□□□□□ -0.06
ABCD3-201ENST00000315713 FASTKD5Q7L8L6 764 aaKnown RBP14.7□□□□□ -0.06
ABCD3-201ENST00000315713 NOL10Q9BSC4 688 aaKnown RBP14.7□□□□□ -0.06
ABCD3-201ENST00000315713 BOLA2Q9H3K6 86 aa14.7□□□□□ -0.06
ABCD3-201ENST00000315713 PIH1D3Q9NQM4 214 aaKnown RBP14.7□□□□□ -0.06
ABCD3-201ENST00000315713 TNPO2O14787 897 aaKnown RBP14.69□□□□□ -0.06
ABCD3-201ENST00000315713 ATP5JP18859 108 aa14.69□□□□□ -0.06
ABCD3-201ENST00000315713 FLT3LGP49771 235 aa14.69□□□□□ -0.06
ABCD3-201ENST00000315713 SMCR8Q8TEV9 937 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms