RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SLIT1O75093 1534 aa14.44□□□□□ -0.1
RETREG3-201ENST00000309428 ZNF569Q5MCW4 686 aa14.44□□□□□ -0.1
RETREG3-201ENST00000309428 APOA5Q6Q788 366 aa14.44□□□□□ -0.1
RETREG3-201ENST00000309428 DRC1Q96MC2 740 aa14.44□□□□□ -0.1
RETREG3-201ENST00000309428 RASSF4Q9H2L5 321 aa14.44□□□□□ -0.1
RETREG3-201ENST00000309428 ZFYP08048 801 aaPredicted RBP14.44□□□□□ -0.1
RETREG3-201ENST00000309428 GRIN1Q05586 938 aa14.44□□□□□ -0.1
RETREG3-201ENST00000309428 UTYO14607 1347 aa14.43□□□□□ -0.1
RETREG3-201ENST00000309428 GTF2A1P52655 376 aaPredicted RBP14.43□□□□□ -0.1
RETREG3-201ENST00000309428 EIF6P56537 245 aaKnown RBP14.43□□□□□ -0.1
RETREG3-201ENST00000309428 CHRNDQ07001 517 aa14.43□□□□□ -0.1
RETREG3-201ENST00000309428 NBPF5PQ86XG9 351 aaPredicted RBP14.43□□□□□ -0.1
RETREG3-201ENST00000309428 TMEM87AQ8NBN3 555 aa14.43□□□□□ -0.1
RETREG3-201ENST00000309428 PPP1R13BQ96KQ4 1090 aa14.43□□□□□ -0.1
RETREG3-201ENST00000309428 ADD2P35612 726 aa14.43□□□□□ -0.1
RETREG3-201ENST00000309428 CCDC70Q6NSX1 233 aa14.43□□□□□ -0.1
RETREG3-201ENST00000309428 NUP88Q99567 741 aaPredicted RBP14.43□□□□□ -0.1
RETREG3-201ENST00000309428 CRACR2AQ9BSW2 395 aa14.43□□□□□ -0.1
RETREG3-201ENST00000309428 REREQ9P2R6 1566 aa14.43□□□□□ -0.1
RETREG3-201ENST00000309428 LOC102724428A0A0B4J2F2 783 aa14.43□□□□□ -0.1
RETREG3-201ENST00000309428 PDIA4P13667 645 aaKnown RBP14.43□□□□□ -0.1
RETREG3-201ENST00000309428 SIK1P57059 783 aa14.43□□□□□ -0.1
RETREG3-201ENST00000309428 ETF1P62495 437 aaKnown RBP14.43□□□□□ -0.1
RETREG3-201ENST00000309428 IRX5P78411 483 aaPredicted RBP14.43□□□□□ -0.1
RETREG3-201ENST00000309428 SETQ01105 290 aaPredicted RBP14.43□□□□□ -0.1
RETREG3-201ENST00000309428 CCDC152Q4G0S7 254 aa14.43□□□□□ -0.1
RETREG3-201ENST00000309428 OXER1Q8TDS5 423 aa14.43□□□□□ -0.1
RETREG3-201ENST00000309428 ISCA1Q9BUE6 129 aa14.43□□□□□ -0.1
RETREG3-201ENST00000309428 UTRNP46939 3433 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 GNPATO15228 680 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 WDHD1O75717 1129 aaPredicted RBP14.42□□□□□ -0.1
RETREG3-201ENST00000309428 ENOX2Q16206 610 aaKnown RBP14.42□□□□□ -0.1
RETREG3-201ENST00000309428 ANKRD18AQ8IVF6 992 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 RASGRP4Q8TDF6 673 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 SMARCE1Q969G3 411 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 BAG1Q99933 345 aaPredicted RBP14.42□□□□□ -0.1
RETREG3-201ENST00000309428 TSPY2A6NKD2 308 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 KLRK1P26718 216 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 ERFEQ4G0M1 354 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 CAVIN4Q5BKX8 364 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 NAA16Q6N069 864 aaPredicted RBP14.42□□□□□ -0.1
RETREG3-201ENST00000309428 SMARCC1Q92922 1105 aaPredicted RBP14.42□□□□□ -0.1
RETREG3-201ENST00000309428 TNS3Q68CZ2 1445 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 UBN2Q6ZU65 1347 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 PXDNLA1KZ92 1463 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 USP17L12C9JPN9 530 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 USP17L21D6R901 530 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 CYP19A1P11511 503 aaPredicted RBP14.42□□□□□ -0.1
RETREG3-201ENST00000309428 USP49Q70CQ1 688 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 ANKRD7Q92527 254 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 BLZF1Q9H2G9 400 aa14.42□□□□□ -0.1
RETREG3-201ENST00000309428 CYP2D6P10635 497 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 EXOSC10Q01780 885 aaKnown RBP14.41□□□□□ -0.1
RETREG3-201ENST00000309428 LINC00301Q8NCQ3 95 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 LPIN2Q92539 896 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 MAGEB6P1A0A0J9YX57 407 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 VWA3AA6NCI4 1184 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 CDKL5O76039 1030 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 PNMA6AP0CW24 399 aaPredicted RBP14.41□□□□□ -0.1
RETREG3-201ENST00000309428 MCM7P33993 719 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 USP5P45974 858 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 USPL1Q5W0Q7 1092 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 DZIP1Q86YF9 867 aaKnown RBP14.41□□□□□ -0.1
RETREG3-201ENST00000309428 KCNG4Q8TDN1 519 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 TEX13AQ9BXU3 409 aaPredicted RBP14.41□□□□□ -0.1
RETREG3-201ENST00000309428 CCDC87Q9NVE4 849 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 RIPOR2Q9Y4F9 1068 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 GOLGA8HP0CJ92 632 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 TTF1Q15361 905 aaPredicted RBP14.41□□□□□ -0.1
RETREG3-201ENST00000309428 WWC2Q6AWC2 1192 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 MICALL1Q8N3F8 863 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 MCM9Q9NXL9 1143 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 KIAA1468Q9P260 1216 aa14.41□□□□□ -0.1
RETREG3-201ENST00000309428 CCT6AP40227 531 aaKnown RBP14.4□□□□□ -0.1
RETREG3-201ENST00000309428 KIF23Q02241 960 aaPredicted RBP14.4□□□□□ -0.1
RETREG3-201ENST00000309428 IFIT1BQ5T764 474 aaKnown RBP14.4□□□□□ -0.1
RETREG3-201ENST00000309428 ILDR1Q86SU0 546 aaPredicted RBP14.4□□□□□ -0.1
RETREG3-201ENST00000309428 KIAA1328Q86T90 577 aa14.4□□□□□ -0.1
RETREG3-201ENST00000309428 MRFAP1L1Q96HT8 127 aa14.4□□□□□ -0.1
RETREG3-201ENST00000309428 FMN2Q9NZ56 1722 aa14.4□□□□□ -0.1
RETREG3-201ENST00000309428 NFAT5O94916 1531 aa14.4□□□□□ -0.1
RETREG3-201ENST00000309428 ZPR1O75312 459 aa14.4□□□□□ -0.1
RETREG3-201ENST00000309428 TRMT1LQ7Z2T5 733 aaKnown RBP14.4□□□□□ -0.1
RETREG3-201ENST00000309428 GOLGA1Q92805 767 aa14.4□□□□□ -0.1
RETREG3-201ENST00000309428 FUCA2Q9BTY2 467 aa14.4□□□□□ -0.1
RETREG3-201ENST00000309428 FANCLQ9NW38 375 aa14.4□□□□□ -0.1
RETREG3-201ENST00000309428 NCAPD2Q15021 1401 aa14.4□□□□□ -0.1
RETREG3-201ENST00000309428 MYL5Q02045 173 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 C3orf67Q6ZVT6 689 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 ZNF274Q96GC6 653 aaPredicted RBP14.39□□□□□ -0.11
RETREG3-201ENST00000309428 GNL3LQ9NVN8 582 aaKnown RBP14.39□□□□□ -0.11
RETREG3-201ENST00000309428 RCOR1Q9UKL0 485 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 GUCA1BQ9UMX6 200 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 G3V3G9 751 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 NLRP5P59047 1200 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 DCAF8Q5TAQ9 597 aa14.39□□□□□ -0.11
RETREG3-201ENST00000309428 MEX3CQ5U5Q3 659 aaKnown RBP14.39□□□□□ -0.11
RETREG3-201ENST00000309428 MB21D2Q8IYB1 491 aaPredicted RBP14.39□□□□□ -0.11
RETREG3-201ENST00000309428 CELF1Q92879 486 aaKnown RBP14.39□□□□□ -0.11
RETREG3-201ENST00000309428 GPKOWQ92917 476 aaPredicted RBP eCLIP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms