RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 TCP1P17987 556 aaKnown RBP4.49□□□□□ -1.69
USH2A-201ENST00000307340 ZNF131P52739 623 aa4.49□□□□□ -1.69
USH2A-201ENST00000307340 EXOSC9Q06265 439 aaKnown RBP4.49□□□□□ -1.69
USH2A-201ENST00000307340 ADALQ6DHV7 355 aa4.49□□□□□ -1.69
USH2A-201ENST00000307340 KSR2Q6VAB6 950 aa4.49□□□□□ -1.69
USH2A-201ENST00000307340 HAUS4Q9H6D7 363 aa4.49□□□□□ -1.69
USH2A-201ENST00000307340 UTP6Q9NYH9 597 aaKnown RBP4.49□□□□□ -1.69
USH2A-201ENST00000307340 CALUO43852 315 aaPredicted RBP4.49□□□□□ -1.69
USH2A-201ENST00000307340 DAAM2Q86T65 1068 aa4.49□□□□□ -1.69
USH2A-201ENST00000307340 THRAP3Q9Y2W1 955 aaKnown RBP4.49□□□□□ -1.69
USH2A-201ENST00000307340 SLIT1O75093 1534 aa4.49□□□□□ -1.69
USH2A-201ENST00000307340 PHBP35232 272 aa4.49□□□□□ -1.69
USH2A-201ENST00000307340 CAV1Q03135 178 aa4.49□□□□□ -1.69
USH2A-201ENST00000307340 ZSCAN23Q3MJ62 389 aa4.49□□□□□ -1.69
USH2A-201ENST00000307340 TBC1D9Q6ZT07 1266 aa4.49□□□□□ -1.69
USH2A-201ENST00000307340 SUPT20HQ8NEM7 779 aa4.49□□□□□ -1.69
USH2A-201ENST00000307340 SMARCA5O60264 1052 aaPredicted RBP4.49□□□□□ -1.69
USH2A-201ENST00000307340 DRP2Q13474 957 aa4.49□□□□□ -1.69
USH2A-201ENST00000307340 PHACTR1Q9C0D0 580 aa4.49□□□□□ -1.69
USH2A-201ENST00000307340 CCDC151A5D8V7 595 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 NEBLO76041 1014 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 TTC6Q86TZ1 520 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 RAB11FIP4Q86YS3 637 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 AFAP1Q8N556 730 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 PDILTQ8N807 584 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 PANK1Q8TE04 598 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 GOLGA8MH3BSY2 632 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 NOL3O60936 208 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 TBCAO75347 108 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 ADCY5O95622 1261 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 KRT13P13646 458 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 ESCO1Q5FWF5 840 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 FBF1Q8TES7 1133 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 ALDH8A1Q9H2A2 487 aaPredicted RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 KAT14Q9H8E8 782 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 ZNF76P36508 570 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 MRPS25P82663 173 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 MYL5Q02045 173 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 NBPF10Q6P3W6 841 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 SUGT1Q9Y2Z0 365 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 ZBTB43O43298 467 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 EIF2S2P20042 333 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 PDE1AP54750 535 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 PSMD2Q13200 908 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 PAIP2Q9BPZ3 127 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 POLE3Q9NRF9 147 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 ANGEL1Q9UNK9 670 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 GOLGA8IPA6NC78 632 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 DTHD1Q6ZMT9 781 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 WAPLQ7Z5K2 1190 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 POLR3EQ9NVU0 708 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 MAP3K15Q6ZN16 1313 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 A0A1W2PQ27 194 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 A0A1W2PQ64 194 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 A0A1W2PQD8 194 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 SNUPNO95149 360 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 FMN2Q9NZ56 1722 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 PROM2Q8N271 834 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 SSH1Q8WYL5 1049 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 DNAI1Q9UI46 699 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 CLTCQ00610 1675 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 CDC42EP1Q00587 391 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 HVCN1Q96D96 273 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 CSRNP1Q96S65 589 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 SH3GLB2Q9NR46 395 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 FRMD3A2A2Y4 597 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 PRC1O43663 620 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 TANGO6Q9C0B7 1094 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 SLC12A5Q9H2X9 1139 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 HOMER2Q9NSB8 354 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 NLRP2Q9NX02 1062 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 A0A1W2PP64 1363 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 EPB41P11171 864 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 CUL1Q13616 776 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 RPGRQ92834 1020 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 EIF2AQ9BY44 585 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 SLC5A4Q9NY91 659 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 GSTTP1A0A1W2PQM5 241 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 FAM76AQ8TAV0 307 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 SENP1Q9P0U3 644 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 MYH13Q9UKX3 1938 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 LMNAP02545 664 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 ASPHQ12797 758 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 SAFB2Q14151 953 aaKnown RBP eCLIP4.48□□□□□ -1.69
USH2A-201ENST00000307340 TMEM57Q8N5G2 664 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 RRP36Q96EU6 259 aaKnown RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 EYA3Q99504 573 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 FOXP1Q9H334 677 aaPredicted RBP4.48□□□□□ -1.69
USH2A-201ENST00000307340 MYH8P13535 1937 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 PODXLO00592 558 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 DNM2P50570 870 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 KIAA0825Q8IV33 1275 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 CDHR1Q96JP9 859 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 JADE2Q9NQC1 790 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 ODF2LQ9ULJ1 636 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 H7C1D1 291 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 AOC3Q16853 763 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 DRC1Q96MC2 740 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 SYCE3A1L190 88 aa4.48□□□□□ -1.69
USH2A-201ENST00000307340 KPNA2P52292 529 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms